Phascolarctos cinereus (koala): 110218638
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Entry
110218638 CDS
T05867
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110218638 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110218638 (COL25A1)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110218638 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110218638
NCBI-ProteinID:
XP_020857081
UniProt:
A0A6P5LMH0
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MLGKNQVAKGAPDGAEKPSSSAGQRCLRTLAPCSLLPAVVSAMCVIACLYLGVKTNDLQA
RISAIEAAKGELPYQLLPASLDRLETMMQEKMERLLAQKSYEHLAKVRIARESPLECNCP
AGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGDQGDQGPRMVFPKINHGFLSADQQL
IKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPQGP
PGQKGSIGAPGTPGMDGKMGEPGLPGTAGQNGTPGPKGDPGERGEKGDAGDSGPKGDMGE
KGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTK
GERGEAGSPGRGERGEPGAPGPKGKQGESGARGPKGSKGDHGDKGDSGALGPRGPPGQKG
DPGATEIIDYNGNIHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGTPGVDGEQGPK
GSKGDMGDSGQPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPG
PMGPHGLPGPKGASGLDGKPGSRGTDGPIGPHGPAGPKGERGEKGAMGEPGPRGPYGLPG
KDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMP
GCWQK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaagaaccaagtagcgaagggagcacccgatggggccgagaagcccagctcc
tctgcgggacagcgctgcctcaggactttggccccttgctccctgctgccggccgtggtg
tccgcgatgtgtgtgattgcctgcctgtacctgggggtgaaaaccaatgacctgcaggcg
aggatctcggccatcgaggcagccaaaggggaacttccttatcagctcctgccggcttcc
ttggatcgactggaaacaatgatgcaagagaaaatggaacgacttttggctcagaaatcc
tatgagcatttggctaaagtaagaatcgccagagaatcacctctagagtgtaactgccca
gcaggacctcctgggaaacgtggtaagaggggcagaagaggagaatctggtcctcctggt
cagccgggtccacagggccctcctggtcccaaaggtgacaagggagatcaaggggatcag
ggccctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcagctc
attaaacgccgcctcattaagggtgaccaaggacaggctggccctcctggaccacctgga
ccaccaggacccagagggccccctggggacacagggaaagatggtccccgtggcatgccg
ggagtacctggtgaaccgggaaaaccaggagaacaaggcttaatgggacctcaggggcct
ccaggacaaaagggttctattggagcacctggcactccagggatggatgggaaaatgggt
gaacctggcttgcccggaacagcgggacagaatggcacacctgggcctaagggcgatcct
ggagagcgaggagaaaagggagatgctggagacagtggacccaaaggtgacatgggtgaa
aagggtgaccctggatcttctgccgcaggaattaagggagaacctggagaatctggccga
ccggggcaaaagggtgaaccagggctgcctgggctgcctggacttccggggataaaggga
gagccaggtttcattggtccgcagggagaaccagggttaccagggttacctggaacaaag
ggtgaacgtggagaagccgggtctcctgggagaggtgagcgaggtgaacctggagctcct
ggacccaaggggaaacaaggtgaatcaggagctagaggtcccaaagggtcaaagggtgat
catggagacaaaggtgactctggagctctgggaccaaggggtcctcctgggcaaaaggga
gatccaggagcaacagaaatcatagactacaatggcaatattcatgaggccttgcagagg
attactactttaactgtcacgggacccccaggacctccgggaccacaaggattgcaggga
ccaaagggtgagccaggatctccaggaacaccaggagttgatggtgaacagggtcctaaa
ggctcaaagggagacatgggggattcgggtcagccaggtgaaaagggaggaattggactt
cctggattaccgggtgccaatggcatgaaaggagagaaaggagactctggtttaccgggg
ccgcagggaccctctatcatcggcccaccaggtccaccaggcccccatggtccaccaggt
ccaatgggaccccatggacttcctgggccaaagggagcatctggcttagacggaaagcca
ggatcccggggtacagatggccctattggaccccatggacctgcaggtcctaaaggagaa
agaggtgaaaagggagccatgggagagcccggacccaggggaccttatggtttgcctggg
aaggatggagagcctggtcttgatggttttcccggtcctcgaggagagaagggtgattta
ggagagaaaggagaaaagggattccgtggagttaagggggagaagggggagccgggtcag
cctggcctggatggcctggatgccccttgccaattggggccggatggattaccgatgcct
gggtgttggcaaaagtga
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