KEGG   Plasmodium cynomolgi: PCYB_141360
Entry
PCYB_141360       CDS       T02490                                 
Name
(RefSeq) DNA ligase 1 precursor
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03030  DNA replication
pcy03410  Base excision repair
pcy03420  Nucleotide excision repair
pcy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PCYB_141360
   03410 Base excision repair
    PCYB_141360
   03420 Nucleotide excision repair
    PCYB_141360
   03430 Mismatch repair
    PCYB_141360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcy03032]
    PCYB_141360
   03400 DNA repair and recombination proteins [BR:pcy03400]
    PCYB_141360
Enzymes [BR:pcy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PCYB_141360
    6.5.1.6  DNA ligase (ATP or NAD+)
     PCYB_141360
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     PCYB_141360
DNA replication proteins [BR:pcy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PCYB_141360
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PCYB_141360
DNA repair and recombination proteins [BR:pcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PCYB_141360
   NER (nucleotide excision repair)
    Other NER factors
     PCYB_141360
   MMR (mismatch excision repair)
    Other MMR factors
     PCYB_141360
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C ICE2
Other DBs
NCBI-GeneID: 14695086
NCBI-ProteinID: XP_004224655
UniProt: K6UML5
LinkDB
Position
14:complement(207416..210518)
AA seq 920 aa
MKLLVLLLIARMLMCKVNSCMRREYAYIIPFMQKNNFYRRKTNFSVKVFTNFRNKRLTNL
AFLIFFLCRKCLSFPKKTMDGQKEETDVKEESKMKEEEKETTKRKIASDGNTKTKKAKGK
SENDIKKGSLFNCTVREDDKVSDLTSPKFNPVHFDVSNLYLSQKDKEKHKFKDSLLFTFL
TNTFNQIEELKGSGTGSKKNVAIILSNVFRVLIYYSPNDLIPAVYITLNKVAPDYLNVEA
GVGEALILKTMSEAYSRTESSIKKDLQQIEDLGIIAESCSCKMRTIFPLPRLTIQSVFNE
LKSIPNLSGSNSQQKKREVIKKLLVSAKTSEAKYIVRFLQQRLRIGVNSATVLQALSYAF
ILTRPSIPEEIVQKGKLMNEQLLNAKGSGTGEDGTVSDSTTEDDKNKVKGEKGEVVKVEK
QNGESPSNIKKENEKENQSVHDQFDFDELVQSIKIRNEKISKPNLFYDIGKEGDTRLLPI
FKELKKSYCEMNNDSDIFECMEKSVKSALCELPNIEIIIQNLLNGDDMNTLSKKCTVKAG
LPVQPMLAKPTKGIQEVLDRFNNVTFTCEYKYDGERAQIHYIDKDNIKIFSRNLETMTEK
YPDVIQIVRDQIISGATECIIDSEVVAYDIENKKILPFQVLTTRKRKDVDIENIKVKICL
FPFDLICCNGVPVIKEPLEIRRKLLYSLLKCKDGVLCYATHSEMNNIEDIDIFLQDAIEN
NCEGLMVKTLLDNASYEPSRRSLNWLKVKKDYIEGLSDSVDLVPIAGYYGKGKRSGVYGA
FVLATYNSETENFQTVCKAGTGFSDEILGSLYETLSDKIIPNKKSYYEVSDKLNPDVWFD
AHYVWEVKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQATTSQQIVDFY
EAQFTNNKNKNDFNEESESE
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgaaattgctcgtgctactcctcatagcgagaatgcttatgtgcaaagttaacagttgc
atgagaagagaatacgcttatataataccctttatgcaaaagaataacttctacaggcgc
aaaacaaattttagcgtgaaagttttcaccaactttagaaacaaaagattaaccaatttg
gcttttttgattttcttcctttgcaggaaatgcctgtccttcccgaagaaaacaatggat
gggcagaaggaagaaacggacgttaaggaggaatccaaaatgaaggaagaagagaaagaa
acaaccaagagaaaaatagcaagtgatggaaacacaaaaacgaaaaaggccaaagggaag
agtgaaaatgatataaaaaaagggtccctatttaactgcaccgttagggaagatgacaaa
gtgagcgatctgacatcacccaaatttaaccccgtacattttgatgtaagtaatttatac
ctttcgcaaaaggataaagaaaaacacaagtttaaagattctttattgttcacttttctg
acaaatacatttaaccaaatagaagaactaaagggaagtggaactggtagcaagaaaaat
gtagcaattatcctgtccaatgttttcagagttttaatatactacagtcccaacgattta
attccagctgtgtacataacgctaaacaaagtagcacctgattatttaaatgttgaagca
ggtgtaggagaagctctgattttgaaaacaatgtctgaggcttatagtagaactgaatca
agcataaaaaaggatttacaacaaattgaggatcttggcataatagcagaaagttgttct
tgcaagatgaggaccatttttcctttacctcgtttgactatccagtcagtatttaatgaa
ctgaagagcatacccaatttgagtggttctaactcgcagcagaaaaagagagaggtaatt
aagaagctgttggtgagtgcgaaaactagtgaagcgaaatatattgttcgttttttacaa
cagcgattgagaatcggagtgaacagcgctactgtgttgcaggccctgtcgtatgcattt
attttaacacgtccgtccattccggaagaaattgtacaaaaggggaaattgatgaacgag
caactgctaaacgcgaagggaagtggtactggggaggatggcactgttagcgacagcaca
acggaggatgacaagaataaggtgaagggggaaaagggggaggtggtcaaagtggagaag
caaaatggggagagtccttctaacataaagaaggaaaacgaaaaggaaaatcagagcgtg
cacgaccagttcgacttcgacgagctagtccagtccattaaaataagaaacgaaaaaata
agcaagccgaatttgttttacgacatagggaaggaaggagacactcgtttgttacccata
tttaaggagttaaaaaaaagctactgcgaaatgaataacgattcggacatttttgagtgc
atggaaaaatcagtgaagagcgccctctgtgagttaccaaatatcgaaattatcattcag
aatttgttaaatggagatgacatgaacacgttaagtaaaaaatgcacagtcaaagcgggg
ctacccgtgcaacctatgctagccaagccaacgaaaggaatacaagaagtacttgaccgg
ttcaacaatgtgacattcacgtgtgaatataaatatgacggagaaagggctcaaatacat
tacatagataaggacaatataaaaatttttagccgaaatttagaaaccatgacagagaaa
tatccagacgttattcaaatagtgcgggatcaaattatcagcggtgctacagagtgcatt
attgacagcgaagttgtggcttatgacatagagaataaaaagatattaccatttcaggta
ctgaccacgagaaagagaaaagatgtggacattgaaaatataaaggtgaaaatatgtctg
ttcccatttgacctcatttgttgtaatggtgtacccgttattaaagaaccactagaaatt
aggaggaagcttttgtattcattattgaaatgtaaggatggagtgctgtgttatgcaact
cactcagaaatgaacaatatagaagacattgatatatttttacaagatgctattgagaat
aattgtgaagggctaatggtgaaaacgcttctggataatgcgtcttacgaaccatcaaga
agatcattaaattggttgaaggtaaaaaaggattatatagaaggactatctgactcggta
gatttagtacccatagcgggttattatggaaaaggaaaaagaagtggagtgtatggtgca
ttcgttttagctacgtacaactcagaaactgaaaatttccaaactgtatgtaaagcaggc
accggttttagtgatgaaattcttggctcattatacgaaactttgagtgataaaattata
ccaaacaaaaaatcgtattacgaagtttcggataagttaaatcccgatgtgtggtttgat
gcgcactacgtatgggaggtaaaagcggccgacttgtctctctcacctgtgcataccgca
gccatcggggtttattcggatgacaagggtattggcttgcgttttccgaggtttctgagg
ctcagggaggataagaatgcggaacaggccaccacatcgcaacagattgttgacttctac
gaggcacagttcacgaacaacaaaaataaaaacgactttaatgaggaaagtgaaagtgaa
tga

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