Pseudomonas chlororaphis PCL1606: PCL1606_04800
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Entry
PCL1606_04800 CDS
T03768
Name
(GenBank) hypothetical protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
pcz
Pseudomonas chlororaphis PCL1606
Module
pcz_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcz03000
]
PCL1606_04800
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pcz01504
]
PCL1606_04800
Transcription factors [BR:
pcz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PCL1606_04800
Antimicrobial resistance genes [BR:
pcz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
PCL1606_04800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AKA21935
UniProt:
A0A0D5XSV8
LinkDB
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Position
complement(509957..510823)
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AA seq
288 aa
AA seq
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MAVVTDGSFTTAADRLGTDKARISRIVSRMEKKLGAQLLTRSTRRLSVTEVGRDYFERAM
CILTAAEAAEAAVAQQSREPKGLLKLTAGSEFGTMVVDEWIAAFLRMAPKVTVEAEYTNR
LVDIIHEGFDVAIRVGALEDSGLSARKLGEVSYGLYAAPGYLKRGPALSAVGDLKRHNLI
MKTTRGRSNWALVNGENTEKVTVSPRCAVNSTIAAKNLALAELGITHLPRFMAEPYVTAG
TLSCVLPGWAEVPAPVHAVFASSRYMDPKVRSFVDLCLSAFKDGGGSQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtggcggttgtcaccgatggctccttcacgacggctgcggatcggctgggcaccgacaag
gcgcgcatcagccgcatcgtcagtcgcatggagaagaagctcggtgcacagctcctcacc
cgctcgactcgccgcctcagcgtgaccgaggtcgggcgcgattacttcgagcgcgccatg
tgcatcctgaccgccgccgaagccgcagaggcggcggtggcgcagcagtccagggagccc
aaaggactgctcaagctcacggctggatccgagttcggaacgatggtcgtggacgaatgg
atcgcggcgtttctgcgaatggccccgaaagtgacggtggaggcggaatacacaaatcgc
ctggtcgatatcatccatgaaggcttcgatgtcgccatccgtgtcggcgcgctcgaagat
tcggggctctcggcgcgcaaactcggcgaggtgtcctacgggctgtatgctgcccctggc
tatctgaagcgcgggccggcgctttccgccgtcggcgacctgaagcgccacaacctgatc
atgaagacgacgcgagggcgctccaattgggccctggtaaacggtgagaacaccgagaaa
gtcacggtgtccccgcgctgtgccgtcaacagcacgatcgccgcgaaaaacctcgcactt
gcagaactcgggatcacgcacttgccgcgcttcatggccgaaccctatgtgactgctggc
acgctgtcttgcgtgcttcccggctgggcagaggttccggcccctgtccacgccgtattc
gcatcgagccgctacatggatcccaaagtgcgcagcttcgtggatctctgcctgagcgcg
ttcaaggatggcggcggctcacagtga
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