Pseudomonas chlororaphis PCL1606: PCL1606_12010
Help
Entry
PCL1606_12010 CDS
T03768
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcz
Pseudomonas chlororaphis PCL1606
Pathway
pcz00300
Lysine biosynthesis
pcz00550
Peptidoglycan biosynthesis
pcz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCL1606_12010
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PCL1606_12010
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcz01011
]
PCL1606_12010
Enzymes [BR:
pcz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PCL1606_12010
Peptidoglycan biosynthesis and degradation proteins [BR:
pcz01011
]
Precursor biosynthesis
Amino acid ligase
PCL1606_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AKA22656
UniProt:
A0A0D5XUA0
LinkDB
All DBs
Position
1240075..1241538
Genome browser
AA seq
487 aa
AA seq
DB search
MSLSLNTIFAHAGRDLLVRELTLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSSIAGRFYGDPSRSLNLIGVTGTNGKTSVTQLVA
QALDLLGQRCGIVGTLGSGFYGALQSGLHTTPNPIAVQATLADLKNSGAKAVAMEVSSHG
LDQGRVTALAFDVAVLTNLSRDHLDYHGTMQAYGAAKAKLFGWADLGCRVINIDDEFGRL
LASDEQDSRLITYSLEDPQAYLYCREAQFDDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLEYPLDEILRVLPKLEGPAGRMQRLGGGSQPLVVVDYAHTPDALEKVLLAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPLQIFDDIRAGF
SAVDKVDFVAGRGPAIAQLIAGASADDVVVLAGKGHEDYQEINGVRLDFSDLVEADRALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcctgaacactattttcgcccacgctggtcgtgacctgctggttcgcgaa
ttgaccctggacagccgcaacgtgcgcgccggcgatctgtttctcgcggttccaggtggc
aagttcgacggtcgggcgcacatcgccgatgcgttgcagcggggcgctgccgcggtggct
tacgaagtcgagggcgcgaccgtcctgccgattaccgatgtgccgctgattccggtcaag
gggttggcggcgcaattgtcgagcatcgccgggcgtttttatggcgatccaagccgtagc
ctgaatctgattggcgtgaccggcaccaacggcaagaccagcgtcacccagttggtagcg
caggcgctcgacctgttgggccagcgctgcggcatagtcggcacccttggcagcggcttc
tatggcgcgctgcaaagcggcttgcacaccacgccgaatccgattgcggtgcaggctacc
ctggccgacctgaaaaactccggtgccaaggccgtggcgatggaagtgtcgtcccacggg
ctcgaccaggggcgggtcactgcgctggcgttcgacgtggcggtgctgaccaacctgtcc
cgcgaccatctggattatcacggcacgatgcaagcctatggcgctgccaaggccaagctg
ttcggctgggccgacctgggttgccgcgtcatcaatatcgacgacgagttcggccggttg
ctggccagcgacgagcaggattcgcggctcatcacttatagcctcgaggatccacaggcc
tacctgtattgccgtgaagcccagttcgacgacgaaggcgtgcgtgcgaccctggtgact
ccgcaaggcgagcatcatctgcgcagcaccctgctggggcgtttcaacctgagcaacgtg
ctggcggcggtgggggccttgctcggcctggaatacccgctcgacgaaatcctgcgcgtg
ctgccgaagctggaagggccggccggccgcatgcagcgcctgggtggcggttcgcaaccg
ttggtggtggtcgactatgcccacaccccggatgccctggaaaaagtattgctggccttg
cgtccgcacgccaagggccgcttgctgtgcctgttcggttgcggcggcgaccgcgatcgc
ggcaagcgcccgctgatggccgaagtggtcgagcgcctggccgatggcgtgctggtcacc
gacgacaacccgcgtacggaagatccgttgcaaattttcgatgacatccgtgccggcttc
agcgcggtggataaagtcgacttcgtggccggtcgtggtcctgcgattgcccagttgatt
gccggcgcttcggcagacgatgtggttgtcctggccggcaagggacatgaggactatcag
gaaatcaacggcgtgcggctggacttctccgacctggtggaagccgaccgagcgctgacg
gcgtgggaggtggcccatgcttaa
DBGET
integrated database retrieval system
