Pseudomonas chlororaphis PCL1606: PCL1606_12660
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Entry
PCL1606_12660 CDS
T03768
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pcz
Pseudomonas chlororaphis PCL1606
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcz03000
]
PCL1606_12660
Transcription factors [BR:
pcz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PCL1606_12660
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_11
MarR_2
HTH_30
HTH_28
HTH_5
HTH_IclR
HTH_Tnp_ISL3
HTH_23
HTH_24
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AKA22721
UniProt:
A0A0D5XUG1
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Position
complement(1315971..1316900)
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AA seq
309 aa
AA seq
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MITDLPPLNAVRAFAAAARHESFSRAADELHVSHSAVSRHIKLLEEHLGVLLFERRIRQS
VLTPAGQAFYEQVSLALTQIAQAAASLRQGAALRKVRINVRPSFAVRWLIPRLPQFMALY
PQIQPEVVTSTQPPDPVRETFDLVIRRGRSGWSSALQPQRLLEDELLVVAAPSLLQETPL
SSPKDLPQHTLLISRTRASDWPKWLEHCQLKPLRHSSALHFDHLHFVLQACVDGLGLALC
PASLLAKDLASGRLVCPLPALRQPLPRYYYAITDNAAPEALVFIEWMQAQIQQDAVDNPA
QLPLRTSSH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccgacctcccccccttgaacgccgttcgcgcctttgccgccgctgctcgccat
gagagtttcagccgcgccgcggatgagttgcacgtgagccacagtgcggtgagccggcat
atcaagttgctggaggagcacctgggggtgctgctgttcgagcggcgtatccggcagtcg
gtcctcacgcccgccgggcaggctttttatgagcaggtgagcctggccctgacccagatc
gcccaggcggccgcttcgctgcgccagggggcggcgctgcgcaaggtgaggatcaatgtg
cggccgtcgtttgccgtgcgctggctgattccgcgtttgccgcaattcatggcgctgtac
ccgcagatccagccggaggtggtgaccagcacccagcctcccgacccggtccgtgagacc
ttcgacctggtgatccgccgcggccgctcgggctggtcgtcggcgctgcagccccagcgc
ttgctggaggacgaactcctggtggtggcggcgccgtcgctgttgcaggagacgccgcta
agcagtcccaaggacctgccgcaacacactctgctgatcagccgcacccgcgccagcgac
tggccgaaatggctggagcactgccagctcaagccgctgcgccattcgtcggccttgcat
ttcgaccatctgcacttcgtgctccaggcctgtgtcgacggcctggggttggccctgtgc
ccggcctcgttgctggccaaggacctggccagtgggcgcctggtctgcccgctgccggca
ctgcgccaacccctgccccgctattactacgcgatcaccgataacgccgcccccgaagcc
ctggtgtttatcgagtggatgcaagcgcagatccagcaggacgcggtggataacccggcg
cagctgccgctacggaccagcagccactga
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