Pseudomonas chlororaphis PCL1606: PCL1606_32820
Help
Entry
PCL1606_32820 CDS
T03768
Name
(GenBank) AMP-dependent synthetase and ligase
Organism
pcz
Pseudomonas chlororaphis PCL1606
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
FSH1
Acyl_transf_3
AMP-binding_C
PP-binding
Thioesterase
Silic_transp
Motif
Other DBs
NCBI-ProteinID:
AKA24733
UniProt:
A0A0D5Y081
LinkDB
All DBs
Position
complement(3587238..3591434)
Genome browser
AA seq
1398 aa
AA seq
DB search
MQWKNLGLNESEYDIFYLNGPLPSHRPGPGIEEFEDLIAGPWYSWLPADDGEPAQTSVDA
LCDAVLHVLSVLEKEGPFDGIFGFSQGGVIASLVDGLPADAALIAALQKRTGRLISPRRE
NGALFRATLIACAGASLSLSELRSRAGLGPVPAPSAQSRSIHLIGREDDYKPWSESLALS
AAARAVFYLDGGHAIEPVPRNDSAIRDLFSHYLKNAGNASERSLALPEPLWQRSSVLSSR
AIARDVQVAAVEIETQGLPQTLTGLLAAQPADAPLLRLARERDASVCTTYGQMLGFCQPG
GDGDLRRLAVQAGEVVAYLAPPGGSAVAATAFLSIASQTCAVPLTPTMSEADTLLALEQY
GVKHMVLFEEVAAAGVRAAFDRYAGSGQARLHRAQQIGAGSPGLFRYLESAPGFQDLPAL
VNPPTAHCLLLRTSGSTSVPKVVPLRQRDLVWNAAVLADGIGIGARDVTYSVMPLDHIGG
LSASLLCSVAAGASITCEGLYDPQGMVQALMHSNPRPTWYSAVPTIHNATLRYLQEHSAT
YLDRQGRWPDHGLRVIRSGAAALKEPDRLVLEKVFGCEVVATYSMSEQMPISQPPRNAGA
WQHRQGSVGVPVTASLAVVDPVTLRPLPFGEAGEIAISGPTVFTGYLHDPIANRQSRFLL
PSPADGQLRDWFLTGDLGEIDASGSLVLRGRLKELIKRGGEQVSPFEVENLLVQHPWVET
AVCFPVPSELYGEEVGCALVLAPAVAGQVTQQQAVREIRGFLREKGLAAFKYPAWLKMVA
DDDLPKTASRKYIRNGLAQVLGVAAAHAEPASIPAPVAVSRTQPAAAAQTLRDAPRVDWS
TLAGLRFLLACYVMFMHIGSDESWGAVANLRQFPWHVHAFFVVAGFSLAVFMPALITRKA
AFFWSRVSAMYPLYALALLLALINLLPGCQPSTFSAVFHWNALPQDMGRLFCEGTPLLQD
SWLANLFSTLAIHLAGLSATPLWGASWFMGFYLWFISMYFQCLVVFPVLYNALYKSRGNT
RRLLVLTAAGLALNGLILLGFWYGYAADATGYGFFDPLSGDRLVPSASQMAMADKDNAVM
LGFYLFAPFWMVYFVAGMCAAFLYDAIRPAEQARAYRWGYVADAITLIVIALSVAHVLQG
YIPHGAGVARASLETFFLRPEAADNFADPGIVNRIWDEINSRLFAPITLLWVFALSTGQG
LTARLLRLEPISQTLAPTAYACFLFHQVVGQWYYAVTRHGEWWNWWSYRKDFYWFSPQPV
PVEWYEYFYVVGLVVIFGKLVQPLDPVIRRVFGLGLASLKKARVAAEQDTLGAILQLVER
STGMAAQPEWSLEECGLASLGVVQFTNTLRAQFSTASRKITLSVPDIMAARDIRAIALIV
DAARDAAPQPQEPVLQAT
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggaagaacctcggattgaacgagtccgagtacgacattttttatttgaacggg
ccgcttcccagccatcggccaggaccgggaatagaagagttcgaagacttgattgccggc
ccctggtattcctggctccccgccgacgatggcgaaccggcccagacctcggtcgatgcg
ctctgtgatgcggtcctgcatgtactgtcggtgctggaaaaagaaggcccgttcgatggc
attttcggttttagccagggcggggtgatcgccagtctcgtcgacggcttgccggcggac
gccgcgttgatcgcggccttgcagaagcgcacggggcgcttgatctcgccgcggcgggag
aatggcgcactgtttcgcgccaccctgattgcctgcgccggcgcctcgttgtcgctgtcc
gaactgcgttcgagggccggtcttggcccggttccggcgccgtctgcgcagtctcgcagc
attcacctgatcgggcgcgaggacgactacaaaccctggtcggagtccctggcgctgagt
gccgcggcgcgcgcggtcttctacctggacggcggccatgccatcgagccggtgccacgc
aatgacagcgcgatccgtgaccttttttcccactacctgaagaacgccggcaacgcctcc
gagcgttcgcttgcgctgcccgagccgctctggcagcgctccagcgttctcagttcccgg
gcgattgcccgcgatgtgcaagtggccgcggtcgagatagagacccaggggctgccgcag
acgctgaccggcctgctggcggcgcaaccggccgatgcgccgctgttgcgcctggcccgg
gagcgcgacgccagcgtgtgtaccacttatggccagatgctcgggttctgccagccgggc
ggtgacggtgacctgcggcggctggcggtgcaggccggcgaggtggtcgcctacctggcg
ccccctggaggcagcgcggtggcggccacggccttcctgtccatcgcctcgcagacctgt
gccgtcccgctgaccccgaccatgagcgaagccgacaccctgctggcgctcgagcagtac
ggggtcaagcatatggtgctgttcgaggaggttgccgccgccggggtgcgggccgccttc
gaccgctatgccggcagcgggcaagcccggctgcatcgtgcgcagcagatcggggccggc
tcgccagggctgttccgctacctggagtcggcgccgggcttccaggacctgccggccctg
gtcaacccaccgactgcgcactgcctgttgctgcgcacctcgggcagcacctcggtgccc
aaggtggtgccgctgcgccagcgggacctggtctggaacgcagccgtcctggccgatggc
atcggcatcggtgcccgcgatgtgacgtacagcgtcatgcccctggaccatatcggcggg
ctcagcgcgtcgctgctctgcagcgtcgcggcgggggcgtccattacctgcgaagggctg
tacgacccgcaggggatggtgcaggcgctcatgcattccaaccccaggcccacctggtat
tcggcggtgccgaccatccacaacgccacgctccgttatctccaggaacactcggccacc
tacctggaccgccaggggcgctggcccgaccacggcctgcgggtgatccgctccggtgcc
gcggcgctcaaggagcccgatcgcctggtgctggagaaggtcttcggctgtgaggtggtc
gcgacctacagcatgtccgagcagatgccgatttcccaaccaccccgcaacgccggggcg
tggcagcaccgccagggctcggtcggcgtgcccgtcacggcttccctggcggtggtcgat
ccggtcaccctgcggccgctgccgttcggcgaggcgggcgagatcgcgatttcggggccg
acggtgtttaccggctacctgcatgacccgatcgccaaccggcagtcgcgcttcctgttg
ccatcgccggcggacggccagctgcgggactggttcctgaccggcgacctgggcgagatc
gacgccagcggctcgctggtgttgcgcggacgcctcaaggaactgatcaagcgcggcggc
gaacaggtgtcccccttcgaggtggaaaacctcctggtgcaacatccctgggtggagacg
gcggtgtgctttccggtgccgtccgagctgtatggcgaggaggtcggctgcgcgctggtc
ctggcgccggctgtcgcggggcaggtgacccagcagcaggcggtcagggaaatccgcggg
tttctgcgggagaagggcctggccgctttcaagtacccggcgtggctgaagatggtcgcc
gacgacgatttgcccaagaccgccagccgcaagtacatccgcaatggtctggcgcaggtc
ctgggtgtggccgcggcgcacgccgagccagcctcgatcccggcgcctgtcgcggtatcg
cgtacacagccggcggcggccgcgcaaacgctgcgcgacgcccccagggtggattggtcg
accctggccggattgcgcttcctgctcgcctgctacgtgatgttcatgcacatcggttcg
gacgagtcgtggggtgccgttgccaacctgcgccagttcccctggcatgtgcatgcgttc
ttcgtcgtcgcggggttctcgctggcggtcttcatgcccgcgctgatcacgcgcaaggcg
gcgttcttctggtcccgggtgtcggcgatgtatccgctttacgccttggccctgttgttg
gccttgatcaatctgctgcccggttgccaaccctcgaccttctcggcggtgttccactgg
aatgcgttgccgcaggacatggggcggctgttctgcgaaggcacgccgctgctgcaggat
tcgtggctggccaacctgttctcgacgctggcgatccatctggcggggctgtcggccacg
ccgctgtggggcgcttcctggttcatggggttctacctgtggttcatctcgatgtacttc
cagtgcctggtggtgttcccggtcctgtacaacgcgctgtacaagagccgcggcaacacc
cggcgcctgctggtgctgaccgccgcgggcctggcgctgaacgggctgatactgctgggc
ttctggtacggctatgcggcggatgcgacgggctacggtttcttcgacccgctgagcggc
gacaggctggtccccagcgccagccagatggccatggcggacaaggacaacgccgtgatg
ctcggcttctacctgttcgccccgttctggatggtgtatttcgtcgcgggcatgtgcgca
gcgttcctgtatgacgccatccggcctgcggaacaggcacgtgcctatcgctgggggtat
gtggccgacgccatcacgctgatcgtcatcgcgctcagcgtggcccatgtgctgcagggc
tatatccctcacggcgcgggcgtcgcccgggcttccctcgagacgttcttcctgcgcccc
gaggcggccgacaactttgccgatcccggcatcgtcaaccggatctgggacgaaataaac
tcgcggctgttcgcgcccatcacgctgctctgggtgttcgccctgagtaccgggcagggc
ctgaccgcgaggctgctgcggctcgagcccatctcgcagacgctggcgcccaccgcctat
gcgtgcttcctgtttcaccaggtcgtgggccagtggtactacgccgtcacccggcacggc
gagtggtggaactggtggagctatcgcaaggatttctactggttcagcccgcagccggtg
ccggtggaatggtacgagtacttctatgtggtcggcctggtggtgatcttcggcaagctg
gtgcaacctctggaccctgttatccggcgtgtgttcggcctggggctggcgtcgctgaaa
aaggccagggtggccgcggagcaagacaccctgggcgcgatattgcagctcgtcgagcgc
agtaccgggatggcggcgcagcctgagtggagccttgaggaatgtggcctggcgtcgctc
ggcgtagtccagttcaccaacacgctgcgggcgcagttctccacggccagccgcaagatc
acgctgtcggtgccggacatcatggccgcgcgggatattcgcgcgattgccttgatcgtg
gacgccgccagagacgcggcgccgcaaccgcaggagccggtgctgcaggcgacctga
DBGET
integrated database retrieval system
