Phoenix dactylifera (date palm): 103702720
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Entry
103702720 CDS
T03274
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pda03016
]
103702720
Enzymes [BR:
pda01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
103702720
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103702720
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
BSP_II
Flavodoxin_5
Tub_N
Motif
Other DBs
NCBI-GeneID:
103702720
NCBI-ProteinID:
XP_038970433
UniProt:
A0A8B8ZG73
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Position
16:complement(11018769..11029787)
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AA seq
652 aa
AA seq
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MTATSHSFSLPSRLALLALFSLSSSFFLWKSRRLRLLRLSSQNPNRDPSPRGKLFFASQT
GTSRALAGRLADRLRAAALPFDLVDPRGYEPEDLPKETLVLIVASTWEDGKPPPNAEFLA
RWLAESAEDFRVGSLLLSGCRFAVFGVGSRSYGESFNATAKDFSGWMRAVGAAEMLPVWE
GDVDNGDMDEVFDSWSQKVIGLLKGDVCENGGHLASIIESNGFDSEEEEEEEEEAMESAV
VDVEDIAGKAPSRKSTGALSNGGQNGDNGLREMVTPIIRTSLEKQGYKIVGSHSGVKLCR
WTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWRWKMDDP
LVIVNAAIDQHTKMIKQMKGVPGVKQEQLLEGLSPKHCALSLVGEPIMYPEINSLIDELH
SRHISTFLVTNAQFPDRIKMLRPVTQLYVSVDAATKDSLKAIDRPLFSDFWERFVDSLKA
LRDKEQRTVYRLTLVKGWNAEDIDAYANLLGIGKPDLVEMKGVTYCGSSATSKLTMENVP
WHSDVRAFSEALAIKSSGEYEVACEHVHSCCVVLAKVSKFKVKGQWYTWIDYERFHELVA
SGKPFKSEHYMALTPSWAVYGAEEGGFDPDQSRYKKERRHGAASIRGSPVAP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacctcccactccttctccctcccttctcgcctcgccctcctcgccctcttc
tccctctcctcctccttcttcctctggaaatcccgccgccttcgccttctccgcctctcc
tcccaaaaccctaaccgtgatccaagtcctaggggaaagctcttcttcgcctcccagact
ggaacctcccgagccctcgccggccgcctcgccgaccgcctccgcgccgccgccctgccc
ttcgacctcgtcgacccccggggatacgagccggaggacctccccaaggaaaccctagtt
cttatcgtcgcttccacctgggaggacgggaagcccccgcctaatgccgagttcctcgcc
cggtggctcgccgagagcgccgaggacttccgggtgggctcgctgctcctctccgggtgc
cgcttcgcggtattcggcgttgggtcgaggtcttatggcgagagctttaatgccaccgcg
aaggacttctcagggtggatgagggccgtcggagccgcggagatgctgcctgtttgggag
ggcgatgtggacaatggagacatggatgaggtttttgattcctggagtcagaaggttatc
gggttactgaagggagatgtgtgcgagaacggtgggcacttagcttctattatagagagc
aacggctttgattcggaagaggaggaggaagaggaggaggaggctatggaatcagctgtt
gttgatgtggaggacatcgctggtaaagctccttcaaggaaatcaactggggctttatct
aatggagggcaaaatggtgacaatggtctgagggaaatggtgacaccaatcattagaaca
agcttggagaagcagggatataaaattgttggttcacatagtggagttaaactttgtagg
tggaccaagtcacaactccgaggtcgtggtggttgttacaagcattcattttatggcata
gagagtcataggtgcatggaagcaacccctagtttggcttgtgcaaataaatgtgttttc
tgttggaggcatcatacaaatcctgttggaaagagctggagatggaagatggatgatcct
ttagtgatcgtaaatgctgccatagaccagcatactaaaatgattaagcaaatgaaaggt
gtcccaggtgtaaagcaggagcagttattagaaggtctctctcctaagcattgtgcttta
tctctggttggtgaaccaatcatgtatccagagataaattcacttattgatgagctgcat
tctagacatatctctaccttccttgtcacaaatgcacaatttccagataggataaagatg
ttgagacctgttactcagttatatgtgagtgtagatgcagctacaaaagacagcctgaag
gcaattgataggccgctctttagcgacttctgggagcgttttgttgattcgttaaaagct
ttgcgagataaagaacagcgtacagtttaccgtttaactttagttaagggatggaatgcg
gaagatatagatgcatatgcaaacttgctgggcattgggaaaccagatttagttgaaatg
aaaggcgtcacatactgtggctcgtctgccacttcaaaattgacaatggagaatgtcccg
tggcactctgatgttagagccttttcagaggctttggcgattaaaagcagtggcgaatat
gaggttgcttgtgagcatgtccactcctgctgtgttgttctagcaaaagttagcaagttt
aaggtcaagggtcagtggtatacatggatagattatgaacggttccacgagctggttgct
tctgggaagccttttaaaagcgaacactacatggccctgacaccttcctgggctgtctat
ggtgctgaggaaggtggatttgatccagatcaatctcgttataaaaaggagaggcgccat
ggagctgcaagcattagaggctctccagtggctccctaa
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