Phoenix dactylifera (date palm): 103704651
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Entry
103704651 CDS
T03274
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
KO
K11797
PH-interacting protein
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103704651
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
103704651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
103704651
NCBI-ProteinID:
XP_008786244
UniProt:
A0A8B7BVL1
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MKAKNFSQKPTLVGHFAGVALIMALRKYKPSGDASSASMASLNFNKKVREKVNPVEPEMT
ASLPTEADVDIDLREVYFLIMHFLSAGPFNRTYGQFWNELLEHQLLPRRYHAWYSRSGLR
SGDEDDDGVSLPLCYLKLAERYPHIGKDHLVKLLKQLILNSSHQLHGMVGGGLPNAADVP
TLLGSGSFSLLGSDRDKEDKGTDKLPGYLRWPHMQADQVRGLSLREIGGGFTKHHRAPSV
RAACYAIAKPLTLVQKMQIIKKVRGHQNAVYCATFDRSGRYVITGSDDRLVKIWSMETAF
CLTSCRGHEGDITDLAVSSNNALVASSSNDFIIRVWRLPDGLPISVLRGHTGAVTAIAFS
PRPSAVYQLLSSSDDGTCRIWDARNSQLSPRIYIPKPSDNSAGKSSDPSPSTVQHSHQIL
CCAFNANGTVFVTGSSDTYARVWNACKSNTDDSEQPNHEMDLLSGHENDVNYVQFSGCVV
ASRSPTADILKEDNIPKFKNSWFTHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHL
KVPPPPMPPQPPHGGPRQRFQPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVH
SLIGHSESTFVLDVHPFNPRIAMSAGYDGKTIIWDIWEGTPVQIYETGRFKLVDGKFSPD
GTSIVLSDEVGQIFIIATGQGESQKDAKYDQFFLGDYRPLVQDANGNVLDQETQLLAYRR
NIQDLLCDSSMIPYPEPYQNMYQQRRLGTLGVEWHPTSVNFAVGPTYNVDTGDYQMLPIV
DLDRWAEPLPEFIDAIDWEPENEVQSDDTDSEYNVTDEYSSEGEHESLSSSSSGEPVCSA
DDSGDHNNECLRRSKRKKHKSEVEFTTSSGRRVKRRNLDEHDGTTLSRTHRLRRSRSGWL
ASRKKSSKSKSLRPQRRAARNALNLFSKITGVSTDGEDEDDSESSSSESESMLPDSNTQS
MESDKSRQNNQIKHAKEKEVSRVECEDVAKPSALAESQANVGSKRRLVLKLPRRDQKAVL
SSKKTRLECDEQDVLVDSLAKANTDVANPNRTCEPAHIFGNTADDIREIGLTEKSDQLNL
SAAYQGSTIKWGEVKLRSSKRLRLGDGSLTETWPASNACPDGPNIVGSDTNGHLKSEDEY
GTSSNSRIRAHGNSIGRMRCRDKAQVEDGVSHGLDGARVEELSSDRKGKSSELPQSSPYI
DQENKVTIRVTSNGNRIESATHMDEEHQNSYQNSESRGIAVRLEGSEVVNDNKNGYIFSS
KNSADHDQVEKNAQPSYLKVRIKSRELAKETSSSSSKLKAIAVEDLRSSECELMSNSPTT
NEQNGVSGMREEDEGTSGQNPEHGEWNNGSESLETWANQNAEPSISHDSKKMHAESYIKK
YNVVYKRSKSFRGRKNSNGGFHGMDDSTWNCNNQGGNMKVNLSDAMADGIRQTRSMGTRA
SMDEITPRTSSFRVKQCHGSLETSRTGGRSILNGGDELLCDQWKPTSNMTVGLRSTRNRR
ENYSSTDSRPLDKRKYQPLCRLSWLMLLEHEESYRYIPQQGDVVAYLRQGHEEYIKASRL
HGAGPWKSIKSLKAVEFCKVQGFDYSTLPGSGESCCKLTLEFIDPSSSGFGKAFRITLPE
LVAFPDFLVERTRYDAAIERNWTHRDKCQVWWRNEDGDGGSWWEGRILAVKTKSSDFPES
PWERYVIQYRNDCSGQHLHSPWELHDADSQWEHPHIDDMARSKLLSSIAKIEQTSIRNQD
CYGIQKLNQVAQKSDFLNRFPVPLSLEVIKRRLENNYYRTLEAVKHDVSVTLSNAESYFG
RSAEMTMKMRRLSDWITRIFSSL
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaagaatttcagtcaaaagcctactctggttggacactttgcaggtgttgca
ctaattatggcccttaggaaatacaaaccttctggtgatgcatcttctgccagtatggca
tctttgaattttaacaagaaggtgcgtgagaaggtcaatcctgtggagccagaaatgaca
gcaagcctcccaacagaggctgatgtagatattgacctcagagaagtctactttttgata
atgcattttctatcagctgggccatttaatcggacatatggacagttttggaatgagctt
ttggagcatcagcttctaccgagaagataccatgcttggtattcaagaagtggtttacgg
agtggggatgaagatgatgatggtgtgtcactcccattgtgctacctcaagctggctgag
aggtaccctcacatcggaaaagatcacttggtaaagcttttgaagcaattgattcttaat
tcttcccatcaattgcatggcatggttggtggaggtcttccaaatgcagctgatgttccc
acactcctgggttctggttccttttctcttcttggatctgatagggataaagaagacaag
ggaaccgataagttgcctggttatctgcgttggccacacatgcaggctgatcaggtgcgt
gggttaagcttgagggagataggtggtggtttcacaaaacatcatcgtgctccatctgtt
cgtgcagcatgctatgccattgctaaaccattgactctagtgcaaaagatgcaaatcata
aaaaaagtacggggacatcagaatgctgtctattgtgctacatttgatcgctcagggcga
tatgtaattactggttcagacgatcgccttgtaaagatctggtcaatggaaactgcattt
tgcctgaccagctgccgcggacatgaaggtgacattactgatttggctgtgagttcaaat
aatgcgttggtagcatcttcttcaaatgatttcattattagagtttggcgtttacctgat
ggactaccaatttcagtcctgaggggacacactggagcagtaactgctattgcctttagt
cccaggccaagcgcagtttaccagctattatcgtcttctgatgatggaacctgccggatc
tgggatgctaggaactcccaacttagtccacgaatttacatcccgaaaccttcagataat
tcagctggaaagagctctgatccctctcctagtactgttcaacacagtcatcagatctta
tgttgtgcatttaatgctaatggaactgtatttgtcactggcagctcagacacatatgcg
agggtctggaatgcttgtaagagcaacactgatgactctgagcaaccaaatcatgagatg
gatctgttatctggtcatgaaaatgatgtcaattatgtgcaattcagtggctgtgttgtg
gcttctagatctcctacagctgatattttaaaggaggataatattccaaagttcaaaaat
tcctggttcacccatgacaacatagtcacgtgctcccgtgatggcagtgcaattatctgg
attccaaggtcccgacgatctcatggaaaagttgggcgctggacacgtgcttatcatctt
aaggttcctcctccacctatgcctcctcaacctccacatgggggtccacgtcagagattt
cagccaactcctcgaggtgttaatatgattgtgtggagcttggataaccgcttcgtgctt
gctgctatcatggattgcagaatatgtgtttggaatgcgtctgatggcagcttagttcat
tcgttgattggtcatagtgaatcaacatttgtcttggatgtgcatcctttcaatcctcgg
atagctatgagtgctgggtatgatggaaagacgatcatctgggatatatgggagggcaca
ccagtacagatctatgaaactggacgctttaagttggttgatggaaaattctctccggat
gggacatctattgttctctcagatgaagttggacaaatatttataatagccacagggcaa
ggggagtctcaaaaggatgcaaaatacgatcagtttttccttggagattatcgccccctt
gtccaagatgccaatggaaatgttttagatcaggagacccagcttttagcatatcgaaga
aatattcaggatctcctttgtgattcaagcatgatcccctaccctgaaccttaccagaac
atgtaccagcagcgtcggttgggtaccctgggtgttgagtggcatcctacttcagtaaat
tttgcagttggcccaacttacaatgttgatactggtgattatcaaatgctgccaattgta
gacctggatagatgggctgagcctttaccagaattcatagatgccattgactgggaaccg
gaaaacgaagtacaaagtgatgatactgattccgagtacaatgtcaccgatgaatattca
agtgaaggggaacatgagagtttaagcagcagttcctctggagagcctgtgtgcagtgca
gatgacagtggggaccataataatgagtgcctccggagatctaaaaggaagaagcacaag
tcggaagtggagttcacaacttcttctgggaggcgtgttaaaagaagaaacttggacgag
catgatggcactactttatcaaggactcatagactgcggaggtcaagaagtggctggttg
gcttcaaggaaaaaatcatctaaatcaaagtcattgcggcctcagaggcgcgctgcgcgc
aatgctcttaatttattttctaaaataactggagtttctacagatggggaagatgaagat
gactcggagagcagttcctcagaaagtgaatcgatgcttccagattcaaacactcaaagc
atggagtctgacaagtcaaggcagaataaccagataaagcatgcaaaagagaaggaagtc
tccagagttgagtgtgaagatgttgcaaaaccttctgcacttgctgaatctcaggcaaat
gttggaagcaagaggagattggtccttaaattgccacgtcgtgatcaaaaagctgttttg
tcttctaagaaaacgagacttgaatgcgatgaacaggatgttcttgttgactcattagct
aaagcaaatactgatgtagctaacccaaatagaacatgtgagccagcacatatttttggc
aacacagctgatgatatcagagaaatagggctaactgaaaagtcagaccagcttaacttg
tctgcagcttaccagggtagcacaatcaaatggggagaagtaaagttgcgctcttctaaa
cgtctgagattgggcgatggttcgctgacagaaacatggcctgcaagtaatgcatgtcca
gatggtcctaacatagttggaagtgacactaatggacatctcaaatctgaggatgagtat
ggaacatcctctaattccaggatccgagctcatggaaacagtattggcagaatgagatgc
agagataaagcacaagttgaagatggtgtttcacatggattggatggtgcaagagttgaa
gagctttcttctgataggaagggcaagtcttcagaacttccgcagtcgtcaccatatatt
gaccaagagaacaaggttacaatccgagtcacgtctaatggcaacagaattgagtcagca
acacatatggatgaggaacaccaaaatagctatcagaacagtgaatccaggggtattgct
gttcgcctagaaggatctgaagttgtgaacgataataaaaatggctacatatttagcagt
aagaatagtgctgaccatgatcaggtggagaaaaatgctcagcccagctatcttaaggta
aggatcaaatcaagagaactagccaaggaaaccagcagttcatcttccaagttaaaagct
attgcagttgaagatcttaggagctctgagtgtgaactaatgtccaacagtccaacaaca
aatgaacaaaatggagtttctgggatgcgtgaagaagatgagggtactagtggacagaat
ccagagcatggtgaatggaataatggatcagaaagcttggagacatgggcaaatcaaaat
gccgagccatccatttcacatgattcaaagaagatgcatgcagaatcctatattaagaag
tacaatgttgtgtataaaaggtcaaagtcattcaggggtaggaagaactctaatggtggt
ttccatggaatggatgatagcacgtggaattgcaacaaccaaggtggaaatatgaaagtc
aatctcagtgatgctatggctgatggcatccgtcaaacaagatccatgggtacaagggca
agcatggatgagattacacctaggacaagtagtttccgagtgaaacaatgtcatggttct
ttagaaacatctagaactggaggaagatcaatactaaatggtggcgatgaacttctatgt
gatcaatggaagccaacctcaaatatgactgttggtttacggtctacccgaaacagaaga
gaaaattatagctctactgactcgagacctttagataagcgaaaataccaaccattatgt
agactttcatggttgatgttgttagagcatgaagagagctatcgatatattccccaacaa
ggtgatgtggttgcatacttgagacagggccatgaagaatacatcaaagcttcccgtttg
catggagcagggccttggaaatcgatcaaaagcttaaaagctgtagaattttgcaaagtt
cagggctttgattactctactcttcctggatctggggaaagctgctgcaaacttacactt
gagtttatagatccttcttcgagtgggtttggtaaagctttcaggatcactttgcctgag
cttgttgctttcccagacttccttgtggaaagaacgcgttatgatgctgccattgagaga
aactggacgcacagagataagtgtcaggtatggtggaggaatgaggatggagatggtggg
agttggtgggagggtcgtattttggcagtaaagactaaatcttctgactttccggagagc
ccatgggagagatatgttatacagtacagaaatgattgttctggacagcatttacatagt
ccttgggaacttcatgatgccgatagccagtgggagcatccccatattgatgacatggcc
aggagcaagttgttatccagtattgccaagatagagcaaacctcaatcaggaatcaggac
tgttatggtatccagaaactgaatcaggtagcacagaagtctgattttctaaacaggttc
cctgttccactgtcccttgaggtaatcaagaggagattagaaaacaattattatcgcact
ttggaggcagtaaagcatgatgtctcagttacactttcaaatgctgagtcctactttggc
agaagtgcagagatgacgatgaagatgcgacgactgtctgattggatcacacgcattttt
tcatctttgtag
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