Phoenix dactylifera (date palm): 103705199
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Entry
103705199 CDS
T03274
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X3
KO
K10867
nibrin
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103705199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103705199
03400 DNA repair and recombination proteins [BR:
pda03400
]
103705199
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103705199
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103705199
BRCA1-C complex
103705199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
FHA
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
103705199
NCBI-ProteinID:
XP_008787059
UniProt:
A0A8B7BWX7
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MTFIDPSHSGSGTFPSYVRIVDRSRYGTSVNREFGAEGVRLRKGQEAKLKDGDLVTFGTG
NATVRFCFVPFVIFLHCSKPIQANRSLEASISSIGANITCTWSNECTHVLVDESSSITLE
LIEAILSKKPVVLSDWCEVLAEQKIRTEIPSCTSYIPSLTVDGILVRVVDPKSREKCLAG
YTFVMVSSHKYKFGDKFQSLLEVAGAKSFHVDEFCSSSQTSADGESNQVVLVIPGERTNE
FDHFRELSSLSRVTEMRLVAAILSGHLESSIIKPPAFIISSSHSTDETIVADSDVEIDTA
TSDRAAAIFNLQGALRYEHDEIVKEPENREDVRNYKDTQKNVNYSLNEHEEKNTKVSEDA
EETRDRKDKSNCTNYSVISPDKSNTSGPKFENVGVMKRVDKSEEAVADRHENSDIMYSQD
LIVKNIGTPLPGRSTTDKVANFKCFRKRNTMSGNSFRNLIPFSKDPYLESGCGSNESSEY
TREEKKRKQIEAIAEDLFNNEKARKRATAGTSLQALLSRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacttttattgatccttctcatagtgggtctggtacttttccctcctatgtccggatc
gttgatcgctcaagatacggtacatctgttaatagagaatttggggctgagggagttcgt
ttgcgtaaaggtcaagaggcaaaacttaaagatggggatttggtaacatttggaaccggc
aatgcaaccgtcaggttttgttttgtgccctttgtaatctttcttcattgctcaaagccc
atccaagcaaatcgttcacttgaagccagcatttcatctattggggcgaacattacttgt
acttggagcaatgagtgcacacatgttcttgttgacgaatcttcttcaataacacttgag
cttattgaagcaattctttctaagaaaccagttgtcctcagtgattggtgtgaggtcctt
gctgagcaaaaaattcgcacagaaattccttcttgtacctcctacattccaagtttgact
gtagatgggatattggtaagggttgtagatcccaagtctcgagagaaatgcctagcaggc
tatacctttgttatggtatcttcacataagtataaatttggtgataagttccaatcttta
ctcgaagttgctggagcaaaatctttccatgttgatgaattttgttcaagtagccagact
tcagcggatggagaaagcaaccaagtagttctggtaattcctggagaacgaacaaatgaa
tttgatcactttcgtgagctgtcttctttgtccagagtcactgaaatgagattggttgct
gccattttatctggacacttggaatcttccatcatcaagccccctgcttttatcatttca
tcttcacattccactgatgagactatagtagcggattctgatgttgaaattgatactgcc
acgtcagatcgtgctgctgccattttcaatcttcagggcgccctcagatatgaacatgat
gaaattgtaaaagaacctgaaaacagagaagatgtaagaaattacaaggacacccaaaaa
aatgtaaattattctctaaatgaacatgaagagaaaaatacaaaagtatctgaagatgca
gaagaaaccagagatcgcaaggacaaaagtaactgtactaattattcagtcatatctcca
gacaagtccaatacttcaggcccaaagtttgagaatgttggtgtcatgaaaagggtggac
aaaagtgaggaagctgttgctgacagacatgaaaattcagacatcatgtatagtcaagat
ttgattgtgaaaaatattggtactccacttcctggtagatctaccacagataaggttgcc
aacttcaaatgctttagaaagagaaatacaatgtctggaaatagcttcagaaatctcatt
ccattttcaaaagatccatacctagaatctggttgtgggagcaacgaatcatctgagtac
acgagggaagagaagaagcgtaagcaaattgaagctatcgcggaggacttgttcaacaat
gaaaaggcgaggaaacgtgccactgctggtacttctcttcaagcccttctttcacggcgc
tga
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