Phoenix dactylifera (date palm): 103706146
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Entry
103706146 CDS
T03274
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
pda03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103706146
03083 Polycomb repressive complex
103706146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103706146
Enzymes [BR:
pda01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
103706146
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
103706146
HDAC complexes
Sin3A-HDAC complex
103706146
BRAF-HDAC complex
103706146
REST complex
103706146
SHIP complex
103706146
MiDAC complex
103706146
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103706146
Heterochromatin formation proteins
Other heterochromatin formation proteins
103706146
Chromatin remodeling factors
NuRD complex
103706146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Plasmod_MYXSPDY
Motif
Other DBs
NCBI-GeneID:
103706146
NCBI-ProteinID:
XP_008788384
UniProt:
A0A8B7BZ80
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All DBs
Position
14:complement(3096327..3103275)
Genome browser
AA seq
431 aa
AA seq
DB search
MPSKDKIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFADELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKFHARVLYIDIDIHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDIKEIGEREGKYYAINVPLKDGIDDASFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIEGHSECVKFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDYTLKTQNGNIENLNSKSYLSTIK
VQVLESLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVGQHTQDKQIQRDDEYYDGD
NDNDHNMDDGL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaaagacaaaatagcatacttctacgatggagatgtgggcaatgtttatttt
ggaccaaatcatccgatgaaaccacatcgactctgtatgacgcaccatcttgtgctctca
tacgagcttcacaagaagatggagatttatcggccgcacaaggcatatccagtggagctt
gcacagttccattcagcagactatgtggaatttttgcatcggattactcctgacacacaa
catttgtttgcagatgaattagctagatataatcttggagaagattgccctgtgtttgag
aatttgtttgagttttgtcaaatttatgctggtggcacaatagatgctgcacgaagactg
aaccatcagctctgtgacattgctataaattgggctggtggtttacaccatgccaaaaaa
tgcggggcatctggcttttgctatattaatgacttagtgttgggcattctagagcttctt
aaatttcatgctcgagttttatatattgatatagatattcaccatggtgatggagttgaa
gaagctttctatttcacggacagggtgatgactgtaagcttccacaagtatggggatatg
ttctttcctggaacaggtgacattaaggaaataggtgaaagggagggaaaatattatgcc
attaatgtcccactcaaggatggaatagatgatgctagtttcactcgactttttaaaaca
attattgccaaggttgttgaaacatatctaccaggtgtgattgttcttcaatgtggagct
gattcattggctggagatcgcttgggttgtttcaatctctccattgaagggcactctgaa
tgtgtcaaatttgtgaagaaattcaatttgcctctattggtaactggaggtggaggttac
acaaaagaaaatgtagctcgctgctggactgttgaaactggggttcttttagacactgaa
cttccaaatgaaattccagataatgagtatatcaaatatttttccccagattacacgctg
aagacacagaatggcaatatagagaacttgaatagcaagtcatatctcagcacaataaaa
gtgcaagttctggaaagtttgcggtgcatacaacatgctcccagtgttcagatgcaagag
gttcctccagatttttatatcccagattttgatgaagatgagcagaatccagatgaaagg
gttggccagcatacccaagataagcaaattcagcgagatgatgaatactatgatggggac
aatgacaatgatcataacatggatgatggtctgtaa
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