KEGG   Phoenix dactylifera (date palm): 103706146
Entry
103706146         CDS       T03274                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03082  ATP-dependent chromatin remodeling
pda03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103706146
   03083 Polycomb repressive complex
    103706146
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pda03036]
    103706146
Enzymes [BR:pda01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103706146
Chromosome and associated proteins [BR:pda03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     103706146
   HDAC complexes
    Sin3A-HDAC complex
     103706146
    BRAF-HDAC complex
     103706146
    REST complex
     103706146
    SHIP complex
     103706146
    MiDAC complex
     103706146
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     103706146
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103706146
  Chromatin remodeling factors
   NuRD complex
    103706146
SSDB
Motif
Pfam: Hist_deacetyl Plasmod_MYXSPDY
Other DBs
NCBI-GeneID: 103706146
NCBI-ProteinID: XP_008788384
UniProt: A0A8B7BZ80
LinkDB
Position
14:complement(3096327..3103275)
AA seq 431 aa
MPSKDKIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFADELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKFHARVLYIDIDIHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDIKEIGEREGKYYAINVPLKDGIDDASFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIEGHSECVKFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPDNEYIKYFSPDYTLKTQNGNIENLNSKSYLSTIK
VQVLESLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVGQHTQDKQIQRDDEYYDGD
NDNDHNMDDGL
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgccgtccaaagacaaaatagcatacttctacgatggagatgtgggcaatgtttatttt
ggaccaaatcatccgatgaaaccacatcgactctgtatgacgcaccatcttgtgctctca
tacgagcttcacaagaagatggagatttatcggccgcacaaggcatatccagtggagctt
gcacagttccattcagcagactatgtggaatttttgcatcggattactcctgacacacaa
catttgtttgcagatgaattagctagatataatcttggagaagattgccctgtgtttgag
aatttgtttgagttttgtcaaatttatgctggtggcacaatagatgctgcacgaagactg
aaccatcagctctgtgacattgctataaattgggctggtggtttacaccatgccaaaaaa
tgcggggcatctggcttttgctatattaatgacttagtgttgggcattctagagcttctt
aaatttcatgctcgagttttatatattgatatagatattcaccatggtgatggagttgaa
gaagctttctatttcacggacagggtgatgactgtaagcttccacaagtatggggatatg
ttctttcctggaacaggtgacattaaggaaataggtgaaagggagggaaaatattatgcc
attaatgtcccactcaaggatggaatagatgatgctagtttcactcgactttttaaaaca
attattgccaaggttgttgaaacatatctaccaggtgtgattgttcttcaatgtggagct
gattcattggctggagatcgcttgggttgtttcaatctctccattgaagggcactctgaa
tgtgtcaaatttgtgaagaaattcaatttgcctctattggtaactggaggtggaggttac
acaaaagaaaatgtagctcgctgctggactgttgaaactggggttcttttagacactgaa
cttccaaatgaaattccagataatgagtatatcaaatatttttccccagattacacgctg
aagacacagaatggcaatatagagaacttgaatagcaagtcatatctcagcacaataaaa
gtgcaagttctggaaagtttgcggtgcatacaacatgctcccagtgttcagatgcaagag
gttcctccagatttttatatcccagattttgatgaagatgagcagaatccagatgaaagg
gttggccagcatacccaagataagcaaattcagcgagatgatgaatactatgatggggac
aatgacaatgatcataacatggatgatggtctgtaa

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