Phoenix dactylifera (date palm): 103712335 Help Entry 103712335         CDS       T03274                                  Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism pda  Phoenix dactylifera (date palm) Pathway pda03030   DNA replication pda03410   Base excision repair pda03420   Nucleotide excision repair pda03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pda00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     103712335    03410 Base excision repair     103712335    03420 Nucleotide excision repair     103712335    03430 Mismatch repair     103712335  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pda03032]     103712335    03400 DNA repair and recombination proteins [BR:pda03400]     103712335 Enzymes [BR:pda01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      103712335     6.5.1.6  DNA ligase (ATP or NAD+)      103712335     6.5.1.7  DNA ligase (ATP, ADP or GTP)      103712335 DNA replication proteins [BR:pda03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     103712335  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      103712335 DNA repair and recombination proteins [BR:pda03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      103712335    NER (nucleotide excision repair)     Other NER factors      103712335    MMR (mismatch excision repair)     Other MMR factors      103712335 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  103712335 NCBI-ProteinID:  XP_008797049 UniProt:  A0A8B7CDT8 LinkDB All DBs Position Unknown AA seq 747 aa AA seqDB search MLLRAPSLSFLNFFPPPPPPFLSRLLFSKSKTLNPSALLRLSSMSARRTVAEALMGSARA AAAAARKKAKHDKPPSPSPSPPPEPSPPRPKPAKTLRTQPDEKKKNAALELRKKCTDFNP GAAAYWKDGEPVPFSFLVHAWELIGNESGRIAMTEILCNAFRTVIATTPGDLLATVYLTA NKIAPPHVGLELGIGEASLIKALAEAYGRKEEHVKKQNSELGDLGLVAKASRSTQKLMFQ PKPLTINKVFNTFLAIAKESGANSQDKKKNHIKGLLVAATECEPLYITRLLQSKMRIGLA EKTVLVALGHAAAYSETCPRPPLQTQSPLEKAAKIIKQVYSVLPSYDKIVPALLQVGVWK LPEACNFTLGVPIGPMLAKPTKAVSEIIDKFQGMEFTCEYKYDGERAQIHYMEDGSVEIY SRNAERNTGKYPDVVSSISRFKKETVKSFVLDCEIVAYDHEKQKILPFQVLSTRARKGVI LSDIKVTVCTFGFDILYKNGQPLLQEQLKVRRQHLYSSFEEVPGVFQFATAIITNDVEEI QKFLEAAVNSSCEGLIIKTLDKDATYEPSKRSNNWLKLKKDYMDSIGDSLDLVPIAAFHG RGKRTGVYGSFLLACYDEHNEEYQTICNIGTGFSESQLEERSASLRNKAIPTPKPYYRYA DTVNPDVWFEPAEVWEVKAADLSISPVHRAASGIVDPNKGISLRFPRLVRVRDDKSPEQA TTSDQVADMYRAQKINHTNNHEEEGDD NT seq 2244 nt NT seq  +upstreamnt  +downstreamnt atgctgttgagagctccgagtctatcattcctcaattttttccctcccccaccgcctccc ttccttagccgcctccttttctccaaatccaaaaccctcaacccctccgccctcctccgc ctctcctccatgtccgcccgccggaccgttgccgaggccctcatgggcagcgcccgcgcc gccgccgccgccgcccgaaagaaggccaagcatgacaaacccccatccccatccccatcc ccgcccccggaaccctcccctcctcgcccgaagcccgccaaaaccctacgcacccaaccg gacgagaagaagaagaacgccgccctcgagctccggaagaagtgcaccgatttcaacccc ggagccgccgcttactggaaggacggcgagccagtcccgttctcgttcctcgtgcacgcc tgggagctgatcggaaatgagtcgggccggattgccatgacggagatcctctgcaatgcc tttcggacggtgatcgccaccacacccggggatcttcttgccaccgtttacctcacggcg aacaagattgctccgccccacgtgggtcttgagcttggaattggagaagcatccctcatc aaggcgcttgccgaggcttatggtcggaaggaggagcatgtgaagaagcaaaacagcgaa ttgggtgacttgggtcttgttgcaaaagcaagccgttcaactcaaaagttgatgttccag cctaaacctttgacaattaacaaggttttcaatacattcctggctattgcaaaggaatct ggggcaaatagtcaggacaagaaaaagaatcatataaagggacttctggttgcagcaact gaatgtgaacctctgtatataactcgtcttctacagtcaaaaatgcgtattggtttggcg gagaaaactgtccttgttgctcttgggcatgcagctgcatattctgaaacatgtccaagg ccgcctctgcaaactcaatctccccttgagaaggctgcaaaaattatcaaacaagtatat tctgtacttccgagctatgacaaaattgtccctgctcttcttcaagttggggtatggaaa cttccagaggcatgcaattttactttaggtgtgcctattggacctatgttagcaaaacca acgaaggccgtatcggagatcattgacaaattccagggaatggagttcacctgtgagtac aaatatgatggtgaacgtgcccagatacactacatggaggatggatcagtcgagatatac agtcgtaatgcggaacggaatactgggaagtacccggatgttgtcagttctatctcaaga ttcaaaaaggaaactgtaaaatcatttgtgctggattgtgaaattgttgcttatgaccat gagaagcagaagatcttacctttccaggtcctcagcactcgtgctcgtaagggtgtgatc ttaagtgatataaaagtcacagtctgcacctttggctttgatattctgtataaaaatggc caacctcttctccaggagcaactcaaagttcgtcgacagcatctctacagttcttttgag gaagtgccaggagtattccagtttgcaactgccataataacaaatgacgtcgaggaaata cagaaattccttgaagcagctgtcaactccagttgtgaaggattgattatcaaaacattg gataaagatgccacatatgagccttctaagcggtctaacaactggctgaagttaaagaaa gattacatggacagcattggtgactcactagatttggtgcctattgctgcattccatggt cgtggaaaacgtacaggggtttatggttcgtttcttcttgcttgctatgatgaacacaat gaagaataccaaaccatctgtaatataggtactggattttctgagtcacaacttgaagag cggtctgcaagtcttcgcaataaagcgattcctacaccaaagccatattatcgatatgct gatacagtgaatccggatgtatggtttgagccagcagaggtttgggaggtgaaagcggca gatttgagcatcagtcctgttcatcgtgctgctagtggcatagttgatccaaataagggt atttctcttcgatttcctcgtttagtccgtgttcgagatgacaaaagccctgaacaagcc acaacgtctgatcaggttgctgacatgtatcgtgctcaaaagattaaccacacaaataac catgaggaagagggtgatgactaa

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