Phoenix dactylifera (date palm): 103712459
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Entry
103712459 CDS
T03274
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103712459
03036 Chromosome and associated proteins [BR:
pda03036
]
103712459
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
103712459
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103712459
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103712459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Chitin_synth_2
DUF2584
Motif
Other DBs
NCBI-GeneID:
103712459
NCBI-ProteinID:
XP_008797208
UniProt:
A0A8B7CDX1
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All DBs
Position
5:16974117..16978475
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AA seq
540 aa
AA seq
DB search
MDESGKKNKPSVRSLWVVKSVKKPQDQVSAAGQVSWKAVGKSPEPVSKESPEISASVAEE
APEVAGTSPANSLISVPLPSGSSSGESDSEKDDVPPVADRQRKKKEKKLAVYAIPEHLKR
QIEMDAVPEVLHETLSPSNYGAYFAVLLYAEDFYIEKWTNFQLYRVPLELDNKRWKKVTK
KKNSCKSAWNDKKTYVSFEITSIPERRPYLLSRDYVFVRRSGKKTRFEGRVIGVVKSTHV
LTEFGNDLLLQYSPSYKYDVKFSFNRTCLKRSHQAVEAALAPSFHHVLFPSCHPRTAEIS
LPSATFLNQRLGVHQISAIHKIIRLKGPPPYLINGPPSVTQNNSLSKAGTTITEAILEIY
FHMDTSRILVCSPKNHTCDTLISCLNKRIPDSDLFRANASFREVEDVPDDVFPLCSHDGE
CFSSPPLSVLQKFRVIVSTLMTCFRLRDNGISPGYFSHIFMVDASSATEPDAMVALANFV
TDETAVVIAGSRTKYADRVRSDMARRNGLKRSYFRRLMESEPYSSNDPLCVCNLDEESEN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatctggcaagaaaaacaaaccttcggttcgatccctgtgggtggtcaaatcc
gtgaagaaaccacaggatcaagtttctgcggccggtcaggtttcgtggaaagctgtagga
aaatcgccagaaccggtttccaaagaatcgccggaaatatcagcttcagttgccgaggaa
gcgccagaagtggctgggacatcgccggcaaactctttgatcagtgttccactgccttcc
ggttcgtcttcgggcgaatcggattcagagaaagatgatgtaccgcctgtggctgatcgg
cagaggaagaagaaggagaaaaagctggcggtatatgcgattcccgagcatctgaaacgg
cagatcgagatggatgcagtgcctgaagttcttcatgaaactctctcgccatcaaattat
ggtgcctattttgccgttctgctctacgcagaggacttctacattgagaaatggaccaat
ttccagttgtatagagtacctctggagctggataacaaaaggtggaagaaggtaacgaag
aagaagaatagctgcaagagtgcttggaatgataagaaaacatatgtgtcattcgaaatc
acttccattcctgagagacgaccatatctattatcaagggactatgtctttgtgcgacga
tcaggaaagaagaccagatttgagggaagagtgattggggtggtaaagagtactcacgta
ttgaccgagtttggaaatgatcttctcttacagtattctccatcatacaagtatgatgtt
aagttttccttcaatagaacctgtttaaagagatctcaccaggctgtggaagctgcacta
gctccttcgtttcatcatgtgcttttcccaagttgccacccaagaaccgcagagatctct
ctaccatctgcaacttttttgaatcaacgccttggtgttcatcaaatctcagcaatccac
aaaattatacggctcaaagggcctcccccttatctcataaatggaccaccttctgtaaca
cagaataattctctctccaaagctggcactaccattacagaagcaatcctcgaaatttac
ttccacatggataccagccgcatattggtgtgctctcctaaaaaccacacctgcgataca
ctcatcagttgcttgaacaaaagaatcccagattcggatctgtttcgggccaatgctagt
tttcgggaggttgaagatgtgccagatgatgtcttcccgctgtgctcgcatgatggcgaa
tgcttctccagtcctccactctctgttctccagaagttcagagtgatagtttcaactctt
atgacttgtttcaggcttcgagacaatggcatcagccctggctatttctctcatattttc
atggtggatgcttcttcagccaccgaacctgatgcaatggtggcactggcaaactttgta
acagatgagacagcagttgtgatagcaggttcgcgaaccaagtatgcagatagagtgcgt
tccgacatggctcgaagaaatggtttgaagagatcatacttccgtagactgatggagagc
gagccatactcgagcaatgatccgctatgtgtttgcaacttggatgaggagagcgagaac
taa
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