Phoenix dactylifera (date palm): 103715431
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Entry
103715431 CDS
T03274
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103715431
Spliceosome [BR:
pda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103715431
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
TPR_14
NRDE-2
Motif
Other DBs
NCBI-GeneID:
103715431
NCBI-ProteinID:
XP_008801264
UniProt:
A0A8B8ZG70
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Position
2:2647386..2670026
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AA seq
905 aa
AA seq
DB search
MHRRCRLLIINTLTGYPYFSLPRSTTPLPSLSTPLPPLLSATAVSRRPVSLSPVSLSTGP
AGTVPVPSSPLPCESLWLVCRMDDSQSAVSQASNVAEYSSTGLVPAEYPMTNSGGEGLVS
CVPTAATDYALSDSSNPGNGNMYSQDTNSVAQNAGMAYESKPDDGAAVASEIAIGHETVA
GISTHTTGYDSMNGAASEVAIYQSTGVIENGGLSNDVGGTVVQQPYEDVAYTAEEERLWN
MVRANCLDFNSWTALIEETEKVAENDIIKIRKVYDAFLAEFPLCYGYWKKYADHEGRLDS
VDKVVEVYERAVLAVTYSVEIWLQYCQFAISTYEDPDTIRRLFERGLAYVGTDYGSHNLW
DEYIRYEESQQAWSHLAMIYTRILEHPIQQLDRYYNCFKELAASRSLSEIRTSEEAAMAV
ANAETGGQSLESEVHPDGVEQSPKPVSAGLTEAEELEKYIAIREEMYKKAKEYESKIIGF
ETAIRRPYFHVRPLDEPELENWHNYLDFIERGDDFNKVVKLYERCLIACANYPEFWTRYV
LCMEASGSMELANNALARATQVFVKKQPEIHLFAARFKELSGDVLGARTEYQLLYSEISP
GLLEAVVKHANMENRLGDKDAAFAIYEKAITAEQEKEQSLILPMLLAQYSRFVYLVAGNA
EKAREILAGSLEHIQLSKPLLEAVIHLESIQPSPKRADYLDSLVEKFIMPNPDNSNMAST
TDREEISSIFLEFLDLFGDAQSIKRAESRHTMLFLRQKSVLISKKRHAEDFLTSDKAKIA
KTYPEPGQSIMGAYPNAQNQWSAGYGQKAPAWPQTSQSQGQQWNPGYAPQAGYTAYGGYA
NYGQPQMPTSAQGASYGAYPPTYPVQAYPQQTYAQPAPAAAAAAGAATVYPQQPAPAQPY
YGSYY
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggaggtgccgattactgatcattaataccctaaccggctacccctacttttcc
ctcccacgaagcactactcctctcccctccctctccacccccctcccccctctgctctcc
gccaccgctgtgtcgcgccggcccgtctctctctcccccgtctctctctccactggcccc
gccggtacggtgcctgtgccttcttcccctcttccctgtgaatctctttggttggtttgt
aggatggatgatagtcaatcagcagtctctcaagcatccaacgttgcagagtattcatcc
acaggtcttgttcctgccgagtaccccatgaccaattcaggtggtgaaggccttgtttct
tgtgtacctactgcagctacagattacgctttgtcagattcttcaaatcctggcaacggg
aatatgtacagccaggataccaattctgttgcacagaatgctggcatggcatatgaatct
aagcctgatgatggggctgctgtagctagtgaaattgccattggtcatgaaaccgtggca
ggtatttctactcatacaactggttatgattccatgaatggagctgcaagtgaagtggcc
atttatcaatctacaggggttattgagaatggaggtttatcaaatgatgtgggtggtact
gttgttcagcaaccatatgaagatgtggcgtatactgctgaggaggaaagattatggaat
atggtaagagcaaattgtttagacttcaattcttggacagccctcattgaagaaaccgag
aaggtcgcagagaacgacattataaaaattcgaaaagtttatgacgcattcttggccgag
tttcctctgtgttatggctactggaagaaatatgcagatcatgagggacgtctggacagt
gttgacaaggttgtggaggtgtatgaacgggctgtcctggcagttacttattctgtggaa
atttggttgcagtactgtcaatttgcaatctcaacatatgaagatccagatactattcga
aggctgtttgaacgtggattggcatatgttggaacagattatgggtcacacaatttgtgg
gatgagtacatcagatatgaagaatcacaacaagcatggagtcatctggccatgatttat
acaagaatactggagcatcctatacaacaactggatcgttattataattgttttaaggag
ttggctgctagtcgatctttatctgaaatacggacttctgaagaagctgctatggcagtt
gccaatgccgagactggtggccaaagtcttgagagcgaggttcatcctgatggtgtagag
caatctccaaaacccgtaagtgcaggtttaacagaagcagaggagttggagaagtatatt
gcaattagggaagagatgtataagaaagctaaagaatacgaatctaagatcattggtttt
gaaacagctattagaaggccatacttccatgtcaggcctcttgatgaaccagagcttgaa
aactggcacaactatcttgattttattgagagaggagatgactttaacaaggttgttaag
ttgtatgaaagatgtctaattgcttgtgccaattatccggagttctggacccgttatgtg
ttatgcatggaagcgagtggaagcatggagcttgcaaataatgctcttgctcgggctact
caagtatttgtgaaaaaacaaccggaaattcaccttttcgctgctagatttaaggaacta
agtggagatgttttgggagctcgtacagagtatcagctcttgtattctgaaatttcacct
ggtctgttggaagccgttgttaaacatgcaaacatggaaaatcgactgggagataaagat
gctgcctttgctatatatgagaaggctatcactgctgaacaggaaaaggagcagtctctg
atattgccaatgttgcttgctcagtattcacgttttgtgtatctggttgctggtaatgca
gaaaaggctagggaaattttagctggatctcttgagcatattcaactgtcaaaacctctt
ctggaggctgttatccatctcgagtcgatccagccatctccaaagcgtgctgattatttg
gattcactggtggagaagttcattatgcccaaccctgacaattctaacatggctagcacc
actgacagagaagagatatccagcatatttttggagtttttggatctctttggagatgca
cagtcaataaaaagggctgaaagtaggcacactatgctctttcttcgtcagaagagtgtg
ttgatatcaaaaaaacgacatgctgaagatttccttacctccgacaaggctaaaatagca
aagacttatccagagccaggtcagtcaattatgggggcatacccaaatgcacaaaaccag
tggtctgctggttatggacaaaaagcgccagcttggcctcagacttcccaatcacaaggg
cagcagtggaatccaggatatgcgccacaggctgggtatactgcatatggaggttatgct
aattatggccagccacagatgccaacatcagctcagggtgcttcttatggtgcatatcct
cccacatatccagtccaggcttatccacaacaaacgtatgcccaacctgcaccagcagca
gcagcagcagcaggggcagcaacggtgtatccccagcaaccagcacctgctcaaccatat
tatggcagttattattga
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