Phoenix dactylifera (date palm): 103717373
Help
Entry
103717373 CDS
T03274
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103717373
09122 Translation
03013 Nucleocytoplasmic transport
103717373
03015 mRNA surveillance pathway
103717373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103717373
03041 Spliceosome [BR:
pda03041
]
103717373
03009 Ribosome biogenesis [BR:
pda03009
]
103717373
03012 Translation factors [BR:
pda03012
]
103717373
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103717373
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103717373
mRNA cycle factors
Stress granule specific factors
103717373
Spliceosome [BR:
pda03041
]
Complex C
Other components
EJC/TREX
103717373
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
Helicases
103717373
Translation factors [BR:
pda03012
]
Eukaryotic type
Initiation factors
eIF-4
103717373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
103717373
NCBI-ProteinID:
XP_008803953
UniProt:
A0A8B7CQE5
LinkDB
All DBs
Position
17:12995431..13005778
Genome browser
AA seq
409 aa
AA seq
DB search
MAAAATAAPRGRQPQGRGVDDENLVFETSAGVEAITSFDQMGIRDDLLRGIYAYGFEKPS
AIQQRAVIPIIQGRDVIAQAQSGTGKTSMIALSVCQMVDTTSREVQALILSPTRELAAQT
EKVILAIGDYINVQAHACIGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIK
LLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEITSKFMTDPVRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNF
TVSAMHGDMPQKERDAIMAEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgcaacggcggcccctcggggccggcaaccgcagggccggggggtcgac
gatgagaacctggtcttcgagacgagcgccggggtggaggccatcacgagcttcgaccag
atggggatccgcgacgacctcctccgggggatctacgcctacggcttcgagaaaccctcc
gccattcagcagcgggccgtgattcctattatccagggccgcgacgtcatcgcccaggca
cagtccggtacgggaaagacctccatgatcgccctctccgtctgccagatggtcgacacc
acctcgagagaagttcaggcattgatcctgtcaccaacaagagaacttgctgcccagact
gagaaagttatattggctattggtgattacataaatgtacaagcccatgcatgcattggt
gggaagagtataggtgaggatatcagaaaactagagtatggagttcacgtggtttcaggg
acaccaggcagagtctgtgatatgatcaagcgaaggaccttacgcacaagagctatcaag
ctcttagtccttgatgagtctgatgagatgttgagcagaggtttcaaggaccagatatat
gatgtatacagatatctacctccagaacttcaggttgttctgatttctgcaacacttcct
catgaaatattggagattaccagcaagtttatgactgatcccgttagaatacttgtcaag
cgtgatgagctgacgctggagggtatcaaacaattctttgttgctgttgagagagaggag
tggaagttcgatacattgtgtgatttatatgacaccctcacaattacccaagctgttatt
ttctgcaacacaaaaagaaaggttgattggttgactgaaaaaatgcgcagcaataacttc
acagtatctgctatgcatggggacatgcctcaaaaggagcgagatgccatcatggcagag
ttcaggtcaggtgcgacccgtgtgctgattacaacagatgtatgggctcgcgggcttgat
gttcagcaggtttctctagtgataaattacgaccttccaaacaatcgagaactttacata
catcggatcggtcgctcagggcgttttgggcgtaagggtgtggcgataaactttgtgcgc
aaggatgacatcaggatattaagagacatcgaacagtattatagtactcagattgatgaa
atgccaatgaatgttgctgatcttatttga
DBGET
integrated database retrieval system
