Phoenix dactylifera (date palm): 120110817
Help
Entry
120110817 CDS
T03274
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
pda
Phoenix dactylifera (date palm)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC_4
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120110817
NCBI-ProteinID:
XP_038982504
UniProt:
A0A8B9AGW0
LinkDB
All DBs
Position
1:complement(20862311..20863885)
Genome browser
AA seq
524 aa
AA seq
DB search
MGFARVKVVVDTTKPLLPGVLIQGKTKVRWQPFVFESVPALCSRCGRMGHQAGTCRFPAT
PCATGASGSSPAEANPGAGPAQSSSGGGEEAQGPIYGPWMVASRQRLHRETLPPRPGKTS
EPHSGPGSSSTRPPPPVARPTTPVSPADTDGWQKPAKVARRRSPLAVGGDGHPALSFGPL
QADSADDLLVESGDPGTSLCLGEGPSRADPAPSRAVAARVQTQKRPRPLVGLGPAGESRQ
GAQLALTVVGRGQQHGPAQRTRAHRAGRRGRGRGPVGAAQDGARELGAADAVGAPRAVVE
PRAVGASRPRDAPGAEAAPGAVVAGAQVPLGPREVARGQQAARSAVEPRVVGLPAQPAVV
SLGQAVAGPKAQPASGPGSCAVPAVQGLGDESAGPFRYSPPSRGEHGGHAPLSEVQPWDV
QGGTGPDGVFRFGPMPLVAGEQGEASSSGSRARDHLRPFSEGCQAAPLRPGEGTDHMTTV
QRIRAAVMQTTSDEQGVGPGIVLEAGPAYQGEDGSEADYVDCDP
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgcccgggtgaaggtggtggtcgacaccaccaagcctctgctacctggagtg
ctgatccaggggaagacgaaagtgcgatggcagcctttcgtcttcgaaagtgtcccggcc
ctgtgctcccggtgcgggcgaatgggtcaccaggcagggacttgccgctttccggcgact
ccttgcgctactggggcttcaggttcgtccccggcggaggcaaacccgggggctgggcct
gctcaatcgtcttcgggcggtggggaggaggcacagggaccgatctatggtccctggatg
gtggcgtcacggcagagactccatcgggagactctgccgccgcggccggggaagacgagc
gagccgcactcggggcccggttcgtcttcgactcggccgccgcccccagtggctcgccca
accacgccagtgtccccggcggacaccgacggctggcaaaagccagcgaaggtggcacgc
cgtcggtctccgctcgccgttgggggggatgggcacccggcgctctccttcggccccctc
caagctgactcggccgacgatctcctggtcgagtcgggggacccggggacgagtctgtgt
ctcggcgaaggcccgagtcgggccgatccggcgcccagccgggcagttgcggcccgagtc
caaacccagaagcggccgaggccgctggtgggccttggcccagctggggaatctcggcag
ggggcccaactggccctcaccgttgtgggccggggccaacagcacgggccagcccagcgc
acccgggcccatagggccgggcgccggggtcggggccgtgggccggtgggggcggcccag
gatggggcccgtgagctcggcgcggctgacgccgttggcgcgccgcgcgccgttgtcgag
ccgcgcgccgtcggcgcgtccagacccagggacgcaccgggcgctgaggccgcgcccggt
gctgtggtcgcgggggcccaggttccgctgggcccgcgcgaagttgcgcgcggccagcag
gccgcgcggtctgctgtggagccgcgggtggtgggccttccggcccagcccgcggttgtc
tccttgggccaagctgttgctggcccaaaggcccagccagcttcgggcccggggagttgt
gccgtacccgcggtgcagggcctaggcgacgaatctgctgggccatttcggtatagcccc
ccctctcgaggagagcacggtggccatgcccccctgagtgaggtacagccatgggatgtg
cagggtggtactggccccgatggagtcttccggtttggccctatgcccctggttgcgggt
gagcagggggaagcctcctctagtgggagtagggccagggatcacctcaggcctttttcg
gaggggtgtcaggccgcgccactgagaccaggagagggtacggaccacatgactactgtg
cagcgtatcagggcggcagtcatgcagaccacatctgacgagcagggggtgggcccaggc
atcgtacttgaggctgggcccgcgtaccagggggaggatgggtctgaggccgactacgtg
gactgtgatccatga
DBGET
integrated database retrieval system