Pocillopora damicornis (lace coral): 113664230
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Entry
113664230 CDS
T05773
Name
(RefSeq) msx2-interacting protein-like
KO
K25100
Msx2-interacting protein
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113664230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113664230
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
113664230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
113664230
NCBI-ProteinID:
XP_027035626
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MVRETRHLWVGNLPENIREEEIVKHFTRYGRVESVKILPKRSAEGGRAAFVDFVDIRSAT
KAHESVNRIGDREMRTDYNEPGNAGNISRLHGHTDPPSRPTGNTAPGSPAQRRRFERRPE
GSGPDGRYNGRSQAFYQDDYSEDETGSSRVSAKGGGTASRSRPRSSGDHRRQPYSHEPRR
NTHKLPEAYRDQEPSPDRTSGSESGSESSHSGSQSASSSGSSSSEEDSRAGSAHGNTAPP
AEVPQSTNRTSALCLRNISLRSGDSGVRDGLYHEFKKHGDVTRISVNGQGTSRYAIVQFR
RPEDAERSLEACRGKLFLGSEMDLQYWQTERYDSSEHSRHRAHASSLMDEEFDAGCTRTL
FVGNIEKSTTYSDLKEAFERYGEIVDVDIKKQTGNNPYAFIQFVELSSAIQARRRMDREF
VGRNRVKVGFGKVSPINTIWVGMIGDLSEQQIERHFSRYGRVTKVVVNYHREQALVSFDS
VESASIAQGEMKGRSMFGRRVKVDFVSRDSRQLFNDALQRSAPSDSSSSSRRYEPSSPRT
RGRGIGPGYYDNRWDRGRGGRGMMRREMSNHRPWHRSGGNYDYPEGSGYHQKGHARYRSS
YEMGGDESDDYDQELRDYNFSRQREREKEQGRQRHERGTRDRDREDGTYSANERFYQDNQ
ERWPENRSSSGSYEEPRDRKDTRSREFPVEPDRERAGYSEDDERAAVHSKPSSRDIEQEE
KRPKRKDKKRRKPRSPTPETVDGEKETVSGGEGSAEKRGLEEKEPRKGSRDGDTATAVQK
GKEGTRDDVWDERRVDGNGTRALETLVKDGERELAPASPPPEKGVRKKEKRDVKKRRKHR
RFRASLGEEEEERELQEETALTEDAAGKEASDVAVSVNKPRDSVAADLHTPEIRDGHVPE
SKRFGQPEFESKKPVRRHSAEDRPSREEREFPRESGSRSPRKSHRDERRRDWEKTDGVRQ
KRRRMSDGESPPPPPPPPPPPREVSEGYPPTEMLTRVGPSPDGLPAQVSSYDIATAPPVH
YDGTRSVPLGSSPATLSPIPPPGIPLNPAVAAPANVSTPPLTVHSPGLPIGVPVAPDLGS
PQGLPPPPPPHSDYNLSSAVPQPSNTDTLLDLLRRYPVVWQGLLALKNDSAAVQMHYLAG
NGRLAEVSLPQAPTNGVGGVPPPIRIAQRMKLEPSQLEGVIRRMQSDKDHCLLLALPCGR
DPLDVHAQTRALKSGFINYLQQKQAAGIINVARPGSSQPSYVLHIFPPCDFAQEHLARVS
PDLLDSAADSGHLMVVVASV
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgaaacccgccatttgtgggtcggaaaccttccggaaaacatcagagaagaa
gaaatagtcaagcacttcactcgatatggccgggtagaaagcgtcaaaatcttgccaaaa
cgtagcgcagaaggaggaagagcagcttttgtagatttcgtggatattcgaagcgctacc
aaagcgcacgaatctgtgaatcgaatcggtgaccgcgaaatgcgtactgattacaacgag
ccgggcaatgcgggtaatatctcccggctgcacgggcatacggaccctccctcgagacct
acgggtaacacagccccgggatcgcccgcacaaagacggcgatttgagagaagaccggag
ggtagtggacctgatggacgttacaatggtcgatcgcaagctttttaccaagatgattac
agtgaagatgaaactggatcctctagggtttctgctaaaggaggaggcactgcaagccga
tcaagacctcgtagtagtggagatcatcggcgtcaaccctatagtcatgaacctcgccga
aatactcacaagttacctgaagcatatcgtgatcaggagcccagtccagatcgcaccagc
ggcagtgagagtggaagtgagagcagccacagtgggagtcagtctgccagttcaagtggc
agtagcagcagtgaggaagatagcagggctggaagtgcacatgggaatacagcaccacca
gcagaagtacctcagagtacaaacagaacatctgctctttgtttgaggaatatttcattg
agatctggagatagtggtgtccgtgatggtctctaccatgagtttaaaaagcatggggat
gtgacacgtatttctgtaaatgggcaaggaaccagcagatatgctattgtacaatttaga
agacctgaagatgctgaaagaagtcttgaagcttgccgtggcaagctgttccttggttct
gagatggatcttcagtattggcaaactgagcgctatgatagcagtgaacactctcgtcat
cgcgcacatgctagttccttgatggacgaagagtttgatgctggttgtactcgcactctg
tttgttgggaacattgaaaagtcaacaacatactctgatcttaaggaagcatttgagaga
tatggtgaaattgtggatgttgatatcaagaaacagactggaaacaatccttatgccttt
attcaatttgttgagctcagcagtgccatacaggcacgtagacgaatggacagagaattt
gtcggcaggaatagagtcaaggttggttttggtaaggtgtccccaattaacaccatctgg
gtggggatgattggggatctaagtgagcagcagatcgagagacacttcagtcgatatggg
cgtgtcaccaaggtggtagtgaattatcatcgagagcaggccctggtgagttttgacagc
gtggagtctgccagcattgctcaaggagagatgaagggtagatctatgtttggaaggcgt
gtgaaggttgattttgttagtcgcgatagccgacaactttttaacgacgccttgcaacgt
tcggccccgtctgacagcagcagcagtagccggagatacgaaccatcatcccccagaaca
cgaggcagaggcatcggccctggatattacgataatcggtgggatagaggtcgaggagga
cgtgggatgatgaggcgcgagatgtccaatcaccgaccttggcatagaagcggcggcaac
tatgactatcctgagggcagcggttaccaccagaaaggccatgctcgttaccgctcgtcg
tatgagatgggtggagacgagtcagatgactatgatcaggaactgcgggattataacttc
agtcgacagagagagagagaaaaagaacagggccggcagagacatgagagaggcacacga
gacagggacagggaagatggcacctacagtgcaaatgaacgcttttatcaagacaatcaa
gaacgctggccggagaacagaagtagctcgggctcctacgaagaaccacgagatcgtaaa
gacacacgttcgcgggaattcccggtcgaacctgaccgagaaagagctgggtatagtgaa
gatgatgagcgggccgccgtgcacagtaagccgtcaagtcgtgacattgagcaggaagaa
aagcgaccgaagaggaaggataaaaagagaaggaaacctcgctcgcctactcctgaaacg
gtggatggagagaaagaaactgtaagtggaggtgaggggtctgcggagaagcgaggtctc
gaggagaaggagccgaggaaaggaagtagggacggtgataccgcgactgctgtacaaaag
ggtaaagaggggacgcgggacgatgtctgggacgagcgacgggtggacggtaatggtacc
agggctttagaaacacttgttaaagacggcgagagggaacttgctccagcatctcctccg
cctgaaaagggcgtcagaaaaaaggagaaaagggatgtaaagaaaagaaggaaacacagg
cgttttcgagcttcgctgggcgaagaagaggaagagcgagagctgcaggaagaaactgcg
ctcaccgaggatgcagctggtaaggaggcctctgatgtggcggtgtctgtcaataaacca
agagacagtgttgctgctgacttgcacacacctgaaatcagggatggccatgttcctgaa
agtaagaggtttggtcaacccgaatttgaaagtaagaaacctgttcgaaggcattctgcg
gaggacaggccgtctagggaagaaagggaatttccacgcgaatctgggagccgctcacct
cggaagtcgcacagagacgagcgaaggcgtgactgggagaagacggatggtgtgagacaa
aaacgacgacggatgtcggacggtgaatcgccaccacctccccctccacccccacctccg
ccccgagaggtttcagaaggctacccacccaccgaaatgttaacaagagtaggcccatct
ccagacgggcttcccgcacaggtgtcatcatatgacatagctacagcaccgccagtacat
tatgatggaactcggtcggtgcccttgggatcttcccctgctactcttagtcccattccc
cctcctggtataccgctgaacccagcggtcgcggccccagcgaacgtttccacacctcca
ttaacagtgcactctcccgggttacctattggggtacctgtggcaccagatttgggatct
ccccaagggttaccccctcctcccccaccacactctgactacaacctttcgtcagctgtc
ccacagccgtcgaacacggacacgttgttagacctattgcggcggtatccagtcgtctgg
caggggctactggctctgaaaaacgactctgcagccgtgcaaatgcattatctggccggt
aacggtcgcttggcggaggtatccttaccacaggcacctaccaatggggtaggaggtgtc
cctcctccaattcgaatcgctcagcgtatgaagttggaaccgtcacagttggaaggtgtc
ataaggaggatgcagtcggacaaagatcactgtcttctgttggcgctgccttgtggccga
gatcctttggatgtccacgcccaaacacgcgcgctgaagagtggttttatcaactatttg
caacaaaaacaagcggcagggatcatcaatgtagcacggccaggcagctctcagcctagc
tatgttcttcacattttcccgccgtgcgatttcgcccaggagcacttggctcgagtttct
ccagacctcttggacagcgctgccgacagtgggcacttaatggttgtggtagcctctgta
tag
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