Pocillopora damicornis (lace coral): 113664788
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Entry
113664788 CDS
T05773
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03015
mRNA surveillance pathway
pdam03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113664788
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113664788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113664788
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
113664788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF1509
Motif
Other DBs
NCBI-GeneID:
113664788
NCBI-ProteinID:
XP_027036214
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MAGEGGVDIDLYATVDEFEPEVTGQHLGSEGLDLYDDVLTTGGVEDEALQAHYEDDVVAV
DIAPEPAMPVQQGVYEYKSYTTVHPKSAAGRISHTYYERNKGKPLYVGNLTWWTNDQELT
EYLQECGVTDLLNIKFFENRTNGQSKGFAMIELGSETSALLVTEKLPKMEIHGQYPVVTP
ATKQFLQQFEAQSRKNNPGSGGGSHSEQENQGYQQGGRGFGYNRGGFRGRGGFPVRPGMG
RGFEHGPPPGDMGRGAPWMGPGHMAMPRHPTPGMPPFYGEHPPAYNPMMQPPQVEKPLGP
MPPQMHVPQQPPPPGAGPMVDHRAAGMVPGFPKAPVAPHVNPAFFPEGPPPETFLAAGTT
GVGATQFLPRPGDEFSESMKRNQMLASTAIKRAMSDANAGDYESGIETLVGAISLIKQSP
TAAEERCQVLVQSLQDCLQGLEMQLLERRSTGSKHHYSDKDDYEGETREKRHRRRRSRSR
SRDRDRRSRSRDKRSRSRDRDRRRHR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgaaggtggtgttgacattgatttgtatgcaacagtagatgaatttgagcca
gaagtgacaggacagcatcttggaagtgaaggcttggacctgtatgatgatgtactaaca
actggaggagttgaggatgaagcactacaagcacattatgaagacgacgtcgttgcagtt
gatattgctcctgaaccagccatgccagtacagcaaggagtttatgaatacaaatcatac
acaacagtccatcctaaatcagcagcaggacggatctcacacacctactatgaaagaaac
aaaggaaaacccctatatgttggcaatttgacatggtggacaaatgatcaagaattaaca
gaatatttgcaagagtgtggtgtaacagatctgctgaacattaagttctttgaaaacaga
acaaatggtcaatccaaaggctttgcaatgattgagcttggctctgagacatcagcctta
cttgttacagaaaaattgcccaaaatggagattcatggacaatatccagttgtcacacca
gctactaaacagtttttgcaacagtttgaagctcaatctaggaaaaataatcctggaagt
gggggaggtagccacagtgaacaggaaaaccaaggatatcaacaaggtggtagagggttt
ggttacaaccgcggaggtttcagggggcggggtggattccctgtgcgtccagggatggga
agagggtttgagcatggacctccacccggggatatgggccgtggagcaccttggatggga
ccgggtcatatggcaatgccaagacatcccactcctggaatgccacctttttatggagag
cacccacctgcttacaatccaatgatgcaacctccccaagtggaaaaacctcttggtcca
atgccacctcaaatgcatgttccacagcaaccccctccacccggagctggaccaatggtg
gatcatcgagctgcaggtatggttccaggattccccaaagcacccgttgcaccacatgtg
aatccagcattctttcctgaggggccaccgccagagacattcttggcagctggaactaca
ggtgtcggtgcaacacaatttttgccaaggccaggtgatgagtttagtgagtccatgaaa
agaaatcaaatgcttgcaagcaccgctatcaaacgagctatgtccgatgctaatgctggc
gactatgagagtggaattgaaacactagtgggagccatatcgcttattaaacaatcccca
acggctgcagaagagagatgccaggtcctcgtacagtcgttacaggattgtttgcaagga
ctggaaatgcagctactagaaaggaggtcgactggcagtaaacaccattacagcgacaaa
gatgattacgagggcgaaaccagagaaaaacgccacagacgcagacggtcacggtcaaga
tcgcgtgatagggaccgaaggtcaagatcacgtgacaaacgttcgagatcgcgtgacaga
gatcgccgtcgccatagatga
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