Pocillopora damicornis (lace coral): 113667305
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Entry
113667305 CDS
T05773
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113667305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113667305
03036 Chromosome and associated proteins [BR:
pdam03036
]
113667305
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113667305
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113667305
PBAF complex
113667305
GBAF(ncBAF) complex
113667305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
SpeFL
Myb_DNA-bind_7
BRCT_2
Motif
Other DBs
NCBI-GeneID:
113667305
NCBI-ProteinID:
XP_027038916
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MAARKKDGAPDWKYYESLDTIALFEPVKQYLLKNCKKYVQVEPPTNKALATLTAQLLQFQ
EDNFGKDVSKQALLTKLPMKMFMDYSSGGSLCVIFANVFKTKMEQGWRRFDFQSPSRMDR
NVELFLNMEKALREAKLLSVPNVFITPEVDPRLAAKLKDIVKRHNGAITEDRSEASHVVY
GPPPPFPEEEWLRPLLRQDKQVLVHWWYYPDSYDTWVPSSDIEDEPQPEPQHQGPWQVNA
RWLTDLDVFNEWMNEEDYELADTDGSGNKRETSPALGKTRRKSLRTGASSDEQPGSPDGG
YVRAVNKPTCKNNPFFWKSKKRKRSPSPDLKKKKKIIYFLDRVGPANPKKKSGKEEENDS
DDATKDLPDPSPIPNVEEVSASSTSGSKGKEADLQPLKGNSLTDISDSGKPEGADVEEME
TESQADTQDQPEDSTEQSAPASPSSSQTKDGIFKEPLVLQDTEAHDENLTEQTHHIIIPS
YASWFDYNSVHAIERRALPEFFNGKNKSKSPEVYLACRNFMLDAYRLNPTEYLTATACRR
NLCGDVCAIVRIHAFLEQWGLINYQVDADGRPAPMGPPSTSHFHVLADTPAGLQPLQPAK
AQIPASQQIIQFKDDLGGKETYKSGVTGANFGLRSDQYLSKKSQKAATATKEWTEQETLL
LLEGLEMFKDDWNKVAEHVGTRTQDECILHFLRLPIEDPYLEDVQLGPLSHQPTPFSQQG
NPIMSTVAFLASVVDPRVASAAAKAALEKFSEMKDEIPQSVIDSHVKNAANARAEKVKQE
NSDESKEETPQPMEVNGSQATVPEGGETRAQDAKAEESSEPSSQAQNGEKTPAINEENIA
KAAASALAAAAVKAKHLAQVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREA
LEYQRQQLLAERQQFHQEQLKAAELRARASAGHLSPSAASPAQLQPQPQTSQPQLQIPPQ
QQQQQQQQQQQQAQAHQQPKLRHSQQAPPTAPHPGATSQAPQVASPAPQVAGNSQPGGSN
PPSASASPAPVMNPGSVPQMGSHPHSGCSTPVSFMGSNAASPASAPSTPSNAPLPHAAAG
QVAHGPADNAVSSPVPPNQSMMD
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacggaaaaaggatggcgctcctgattggaaatactacgaatctctcgatact
attgctctctttgaaccggtcaagcagtatctgctgaaaaactgtaaaaagtatgtgcaa
gtggaaccacctacgaataaagctctcgctacacttacagcacagctgctacaatttcaa
gaagataactttggcaaggatgttagcaagcaggcacttttgactaaactaccaatgaag
atgttcatggattactcttcaggtggcagtctatgtgttatctttgcaaatgtatttaag
accaagatggagcaaggatggaggagatttgacttccagtctccatcacgaatggataga
aatgtggagctcttcttgaacatggaaaaggcattaagagaggctaaacttttgagcgtg
ccaaatgtgttcattacaccagaagtggatccacgacttgctgccaaattaaaggatatt
gtcaagaggcacaatggtgctataacagaagacagatcagaagcaagtcatgttgtttat
ggccctcctccaccttttcccgaagaggagtggctgaggcctctgctaagacaagacaaa
caagttctagtacattggtggtactacccagacagctatgacacctgggtgccatcaagt
gacatcgaagatgagcctcagccagagccccaacaccagggaccctggcaggtgaatgct
cgttggttgacagatcttgatgttttcaatgagtggatgaatgaggaagattatgagtta
gctgatacagatggctctggcaacaaaagagaaacatccccagcattaggaaaaacaaga
agaaaaagcttaagaacaggtgccagttctgatgagcaaccaggcagtcctgatggaggt
tatgtgagggcagttaataaacccacttgtaagaataatccatttttctggaaatctaag
aaaagaaagagatccccatcacctgatctaaagaagaaaaagaaaataatatattttctt
gatagagtgggaccagcaaatccgaagaaaaaatctggaaaagaggaggaaaatgacagt
gacgatgctactaaagatcttcctgatccatcacccattcccaatgttgaagaagtctct
gcttcgagtacctcaggctccaagggaaaagaagctgatctacaacctttgaaaggaaat
tcattgacggacatttcagattcaggaaagccagagggtgccgatgtggaagaaatggag
accgaaagtcaagcggatacacaagatcaacccgaagacagtacagagcagtctgcgcct
gcctcaccttcatccagccagacgaaagatggaatcttcaaagaaccgcttgtcctgcaa
gacacagaagctcacgatgagaaccttacggagcagacgcatcacatcatcatacccagt
tacgcctcttggtttgactacaacagtgtccacgccattgaaagaagagccctgccggag
tttttcaacggaaaaaacaaatccaagtctcctgaagtgtatctggcttgccgaaacttt
atgctcgatgcttatcgactgaatccaacggaatatctgactgctacagcttgccggcga
aatctatgcggtgatgtgtgtgcgattgtgaggatccatgccttcttggagcagtggggt
ctgatcaattatcaagtagacgcagatggccgtccggcgcctatggggccaccttctaca
tctcacttccatgtgttagcagatactcctgcgggtttacagcctttgcaacctgcgaaa
gcacagattcctgcctcccaacaaatcatccaattcaaagatgacctgggaggaaaagag
acttataagagcggtgtgacaggagcaaactttggccttcgttcagaccagtacctatct
aaaaagagtcaaaaggctgcaacagccacaaaggagtggacggaacaagagacactcctc
cttttagagggcctggaaatgttcaaagacgactggaacaaggtggctgaacatgtcgga
acacgaactcaagatgaatgtatcttgcacttccttaggcttccgatagaagacccgtac
cttgaggatgtacagttgggtcccttatcacaccagcccacgccgttcagtcagcagggt
aaccctatcatgtctactgtagcttttcttgcttctgttgtggatcctcgggtcgccagt
gctgctgctaaagctgctctagagaagttctctgagatgaaggacgagataccgcagtca
gttattgacagccatgttaagaatgctgcaaatgcacgagcggagaaagtgaagcaagaa
aactcagacgaaagcaaagaagaaacaccacaacccatggaagtgaatggaagccaggca
actgtccccgagggaggagagacacgagctcaagatgcaaaggcggaagagtcttccgag
ccaagtagccaagcgcagaacggcgagaaaacaccggctataaacgaagaaaacatcgcg
aaggcggcggcttcagccctagcagccgctgcagtcaaagcaaagcatctggcgcaggtt
gaggagcggaagatcaagagtcttgtagcgcttcttgtggagactcagatgaagaaactg
gaaattaaactgcgccactttgaagaacttgaaaccatcatggaccgtgaacgagaagcg
ttggaatatcagcgtcaacagctacttgctgaacgacaacaattccatcaagaacaactg
aaggccgccgagctgcgcgctcgagcttctgccggtcacctttccccgtcagctgcctct
cctgcgcagctgcaaccacaaccacagacatcccaacctcagctgcagatcccaccacag
cagcaacaacagcaacaacaacaacagcagcagcaggcacaggcacatcaacagccaaag
cttaggcattcgcagcaagccccgcccacggctcctcatccaggtgccaccagccaagcg
ccacaagtcgccagccccgcgccacaagttgcaggtaacagtcagcctggcggatccaat
ccaccgtccgcctctgcctcaccagctccagtaatgaatcctggctctgttcctcagatg
ggctcccatcctcattctggatgcagtaccccggtgtcattcatgggatcgaatgctgcc
tcccctgcatcagccccgagtacccccagtaacgcccccttacctcatgctgccgctggc
caggtcgctcacgggcccgcggacaatgcggtttcgagcccagttcccccgaaccaaagc
atgatggattaa
DBGET
integrated database retrieval system
