Pocillopora damicornis (lace coral): 113668859
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Entry
113668859 CDS
T05773
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113668859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113668859
Spliceosome [BR:
pdam03041
]
Complex A
U1 snRNP components
U1 related factors
113668859
Complex B
113668859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Glyco_hyd_101C
LUD_dom
Motif
Other DBs
NCBI-GeneID:
113668859
NCBI-ProteinID:
XP_027040615
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MASGGYPSSSGSGQGYSGNPPPVMMPGGYPVAGIPMMPPGYGPPGMPPFQPVAMPTGQPM
AYPPGGMPGMPYPQQLPQQTMGQQVTGTFQPIPSSGSPVVMMPAVVRPMQVAAESGGTSS
PSVVKQIQEQENKPADSPTQTNKSEQQQNEKEEVKKEKKKVKKPKPPKKKTPWTEHKAPD
GRTYFYNTDTKVSTWQKPAELKTPGEVQLDSCPWKEHKSDTGRIYYHNNETKESTWTIPK
ELAELKEIIKQEQEQEEEEEVSEEEDEDENKESDEKDGKKADEGTAQDYPMASAVNVSET
PAVATVEKKEYVYETKEEAKQAFKELLREKEVPSNSTWDNAMRMIVNDPRYGALKKMNEK
KQAFNEYKTKRANEEKEEQRQKAKQAREDLRSFLEKHPKMHSSVRWRRAGELFDGEPMWE
AVHERDRKDVFEDVVFFLTKKEKEEEKEQRAHNRKLMLTVYNSMPGITYRTTWAEVLLDE
LHKRGKLHSMSLWIDLYPTISADVRFTNMLGQPGSTPLDLFKFYVEDLKARFSEEKKIIK
EILKDLDFTVDINTGFSEFNDLVKRDLRSDTLDPGNIKMSFNHLIEKAEAREKERMKKEE
REQRRRESSFKQLLKSCTPVIEANSTWDKVRERLEEDPAFAAVTVESERIRLFNEHVGSL
EACTHNHSKSHKKTKKAKKHRKRSRSRSPSGESSQSEEEFPKEKTSSHKKKRHKRSRSKS
PESSASESEQEKEPSSSKKKKHKKKSKKKKQRSPDEESEGERYNREKEDREKERDKGRRE
RDKVREKEADRSREGEREREREREKERDYKEKDRDRDRERDKDRDRDREKDLDKDKEADK
GKDKSKKSQDKTAWDTTSSESESELECRRRALLKQLGADGDDQ
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggaggatacccttcttcctcaggaagtggacaaggttactctggaaaccca
ccgcctgtaatgatgcccggtggttatccggtagcaggaataccaatgatgccacctgga
tatggtccccccggaatgcctccttttcagcctgttgccatgccaactggtcagccaatg
gcttatcccccaggtggcatgcctggaatgccttatcctcaacaacttccccagcagact
atggggcagcaagtgactggaacatttcaaccaataccaagtagtggttcaccagtagtg
atgatgcctgctgttgtgagacctatgcaagtggcagctgagtctgggggcaccagctcc
ccttcagtagtcaaacaaatccaagaacaagaaaataaacctgcagacagcccaacacaa
accaacaaatctgagcaacaacagaatgagaaggaagaggtcaagaaagagaagaagaag
gtcaagaaaccaaaacctccaaagaaaaagaccccatggacagaacacaaggctcctgat
ggaagaacatacttctacaatacagacaccaaagtgtccacatggcaaaagccagcagaa
ctcaagactccaggagaggttcaacttgactcctgtccttggaaagagcacaagtcagac
actggtagaatttattatcacaacaatgaaaccaaagaatcaacttggacaatcccaaag
gaactggcagaacttaaggaaataataaaacaagaacaagaacaagaagaggaagaggaa
gtttcagaagaagaagatgaagatgagaacaaggaaagtgatgaaaaagatggcaaaaaa
gctgatgagggaactgcccaagattaccccatggcaagtgcagtgaatgtaagtgaaact
ccagctgttgccactgtggagaagaaagagtatgtttatgaaacaaaggaagaagctaaa
caagctttcaaagaactcctgagagaaaaggaggttccatctaattccacttgggataat
gccatgagaatgattgttaatgatcccagatatggagccctgaagaaaatgaatgagaaa
aaacaagcattcaatgagtataaaacaaaaagagccaatgaggaaaaggaggaacaaaga
caaaaagcaaaacaggctcgtgaagacttgcgtagcttcttggaaaagcatcctaagatg
cactcttcagtgcgatggcgcagggcaggggaattgtttgatggtgaaccaatgtgggag
gctgtacatgaaagagacaggaaagatgtgtttgaggatgtagttttcttcctgacaaag
aaggaaaaggaagaggagaaggaacaacgagcacacaacagaaagctgatgttaacagtg
tacaattccatgcctggtattacttacaggaccacttgggctgaggttttgttagatgag
ttgcacaagagaggcaaacttcactccatgtcgttatggattgacttgtatccaacaatc
agtgcagatgttcgctttacaaacatgttaggtcaacctgggtcaactcctttagacctt
ttcaagttttatgtggaagacttgaaagccagattcagtgaagaaaagaaaattataaaa
gaaattttgaaggatcttgactttacagttgatattaacactggttttagtgagtttaat
gaccttgtcaaacgagatctcaggagtgatacactggatcctggaaacatcaaaatgtca
ttcaatcatctaattgaaaaagctgaagcaagagagaaagaacgaatgaaaaaggaagaa
agagagcaaagaagacgagaaagttccttcaagcagctcctcaagtcatgtactccagtg
attgaggcgaattctacttgggacaaggtgagggaaagactcgaggaagatcctgcattt
gcagcagtcacagtggaatctgaacgaataaggctttttaatgaacacgttggttcactt
gaggcatgtacccataatcattcaaaatcacacaaaaaaacaaagaaagccaagaaacat
aggaaaaggtcaagatctcgatcgcccagtggggagtcgtctcaatctgaagaagaattt
cccaaagaaaaaacatcgtcacacaaaaagaaacgtcacaagcgatcacgctctaagtca
ccagaatcctctgcttccgaatcagaacaagaaaaagaaccaagttcgtcaaaaaagaaa
aagcataagaagaaatcaaagaagaagaaacaacgatcgcccgacgaagaatctgagggt
gaaaggtacaacagagagaaagaggacagggagaaggagagggacaagggccgccgagag
cgtgacaaagttcgagaaaaggaggcggaccgtagcagggaaggagaaagagaacgagaa
cgtgagagggagaaagaaagagactacaaagagaaagaccgagacagggacagagaaaga
gacaaagatagggatagggacagagaaaaagatctggataaggataaagaagctgacaaa
ggaaaggacaagtccaagaaatcacaggataagaccgcgtgggatactacctcgagtgag
agcgaaagtgaactggaatgcagacgaagagccctgctgaagcaacttggcgctgatggg
gacgaccaatag
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