Pocillopora damicornis (lace coral): 113671426
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Entry
113671426 CDS
T05773
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein-like isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113671426
03036 Chromosome and associated proteins [BR:
pdam03036
]
113671426
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113671426
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113671426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DnaJ
UBA
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113671426
NCBI-ProteinID:
XP_027043414
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MPKEEEKEYLKILGVDKYSPENEFEIKRAYKKLALRFHPDKNQSDFSASNSKKQFDEISK
AFESLTLDYRNDTNQPDYDQIFFDFLRDIFDWREDAEGAGTSNFLTYFCGSKQHPCSSDG
DFDSRYQDTEDDEDVDGEGDLDSIMEIIKNRKKKGKHVPEEFKEENLMDMKSKLNQHKED
MKRDATKKQSSKKGKMPVPVAKPKPKSKKQLQAEQRRREKEMEKIAVELEEKRKEEVEKE
KQRKQLEVEKQKRLEEERIKAQNEERKRREKEQKERERQQKLEQEKEEKRRRQQEEEKKR
REEEEKRKKAEKEKAEKEKAARKAAQQAAKEKEDKEKAANKNQNMKRLQQQQRTDQQQYP
REIPPRFQKKMKQQQQQSQYQTPSQQMQQQQSLPQQTKPQPKQPPAVNKKKDPNRFGPKE
FADMIEPVDDSGWSQSAPVKGSGWGNSLETWEDADKWGSEDRQWGDKEGTWDKLVVDEGD
KDTWPSVGSKGAIGDKIKTSSLDAGSEKGQYSAESSPKTSVSSMSTALISDNSSSAQGNV
NTSMDKKSLPTSNWHGTSTTSSENWDVIDESIDQAIDAAEAATAKDNGGLGAGWGGVTKG
GFGGLIGNGSNWESSTDAKDSVSLGRSHDPGKGELVNTSYVSETPSWSKTPGKAVKPKVP
TTSTVVTSNLTASWGGTPAETDTKWTEPHSTSDGLTNSKSSKPPILDSNSVAKSSGDIES
EQTVTSTSTTKPSSGWGEVPVSNSSKWGSSVDITGTSCWDNVVSKSDTTSDLKTVSSSKV
SQWLESTGVSLADLEWGQENLDNDEGSEGSLDGWTTASKRNRAPKPANDSNAWMNRSLKQ
LLDMGFKQEDAEKALKANHMNIESAIGDLLAMNMSENREQSVSVPSGKLQEPDPAEAARI
QQQQQQGQGKLNRKQRRKLQQQQQAEQQTLESKTEQRQGQNEVAVSKSVTQVSESVTKPA
SEQQDKTSETQSTSKTDEVQQDSKTKTSTSTTKPEKPPSSVAGAVKPINGQSQLPSNGKR
SGPPVVPPAPGPGVQGPLRPTLAHPLLHPQFVQQIHLQQLRMAQGGLLQPPFTPQQFAML
QQIAQLQLVQQRLAAQSVAQQHLGQKQQVVPQQQLYQQQQQIALMIAQMQQQVLQQQPGL
AGRHPALPFTAVQQQQQQQSLLQQQQQQQSPNAQQKGNKAATNDKPATEAPTSKTADAVK
SQPSEPSAVSPVTSEEQPKQPSPVTQSRLTQWKQPLLHEPSSAPVTQSTVTSSTPASVDS
KAQTISAPSQSSSGVLTSVVSAPSISTSDLSDSSAPNSNNVSPRARIPDPVSSRWGVDAG
PKLSADPPEFKPGVPWRPAPKSDKRDEVRDSVSPNTVESSSRPSSTIDSSSDSWSNLGNQ
TVSAPSSVQLGSNVKVADNVVTTIASSSFSGLLVNNHTFESSQIDFGVGSTPWLGNKAPA
PPAQATSRSAGSSAASLLRPPPGLGSDTTLPESPLFDEEPPAWLKSLIDGSSLGGDKTQP
EFQFSRFGFANSSTPWSPRDSSTQPFSPLTPNPQPWAAVGGPAPTLSSSASSVTMATSEN
RSGSVSTTEPSSLQNSGIIWSTNQPIPSAEEKLSGNLPGTSVPPVSASSGVAPSRTAVNS
MSTWLVLRNLSPRMDPKTLRPMCERHGPLLTFQLNLRHGNSLIRYGSMEEAAKARAALNG
MMLVGSQVAADFATDSDIGSFFEQTMDWSANPFPSNTYGNQWSFQNVLGSAATSDNIQST
TKAPIGKVPPGVSSTEQPIPKVNNTTSGMQWGSTIGTLPSPSQGLVAGEQSKVNAPSPQW
VIGSQGSEQPGAKPNTAAPSVPWGSAHGHAPAPSYLWGTGPSQQTALGGNFSQVPSMWSF
PAGVPRDVEPQSGSGDGLVSPSMTTFLPPGLLNGGGDSV
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagaagaggagaaggaataccttaagatactgggagtggataaatattcacct
gaaaatgaattcgaaatcaaacgagcatataagaaacttgcactccgatttcaccctgac
aagaaccagagcgacttctcggcaagcaactctaaaaagcagttcgatgaaatcagcaaa
gcttttgaatctctcactttagattacagaaacgatacaaatcaaccagactacgatcag
attttctttgactttctacgcgatatctttgactggagagaagatgcagaaggagctgga
actagtaactttcttacatatttctgtggttctaagcagcacccatgttcctctgatgga
gacttcgattcaagataccaagatactgaagatgacgaggacgttgatggagagggtgac
ttggatagtatcatggagatcattaagaatcgcaaaaagaaaggaaaacatgttcctgaa
gagttcaaagaagaaaatttgatggatatgaagagtaaattaaatcaacacaaagaagac
atgaagagagatgctactaaaaagcagtcaagcaagaaagggaagatgcctgtacctgtt
gcaaagccaaaacctaagagcaagaaacaactgcaagctgagcaacgacggagagaaaaa
gaaatggagaagattgcagtggaattagaagagaagcgaaaagaggaagtggaaaaagag
aaacaaaggaaacaacttgaggttgagaaacagaaacggctggaagaagagagaattaaa
gcacagaatgaggagaggaaaaggcgggaaaaggaacaaaaggagcgggaaagacagcaa
aaacttgagcaagagaaagaggagaaaagacgtcgtcagcaggaggaggagaaaaaacgc
agagaagaagaagaaaaaaggaagaaagctgaaaaagaaaaggcagagaaggaaaaggca
gcaagaaaggctgcccaacaggctgcaaaagaaaaagaagacaaagagaaggcggcaaac
aaaaatcagaacatgaagagactacaacagcagcagagaacagatcagcaacaatatcca
agagaaataccaccaaggttccaaaagaaaatgaaacaacagcaacaacaatcacagtat
caaacaccttcacaacaaatgcagcaacaacaatcacttccacaacaaaccaaacctcaa
ccaaaacagcctcctgcagttaacaagaagaaggatcctaatcgttttggaccaaaagaa
tttgcagacatgatagaaccagtggatgactcaggctggtcacaatctgcccctgtgaag
gggtcaggctggggtaattcactggaaacttgggaagatgcagacaagtggggaagtgag
gatcgacaatggggagataaggaagggacatgggataaacttgttgtggatgaaggagat
aaagacacttggccatctgtaggatcaaaaggagcaataggtgataagataaagacttcc
tccttggatgctggctctgaaaagggtcagtattcagcagaatcttctcctaaaacttct
gtttcttctatgtctactgcacttatctctgacaattcaagttctgctcaaggaaatgtc
aacactagtatggacaaaaagtctttgccaactagtaattggcatgggacttcaacaaca
tcatctgagaactgggatgtcattgatgagtctattgatcaggctattgatgctgctgaa
gcagcaacggcaaaagataatggaggacttggggcaggctggggcggagtgaccaagggg
ggatttggggggttaatagggaatggttcaaactgggagagtagcacagatgcaaaggac
tcagtgtcgttagggcgcagtcatgacccaggaaaaggagagcttgtgaacacttcatat
gtatctgagactccaagctggagcaaaacacctggaaaggctgtcaagcctaaagtgcca
acaacatcaacagtggttactagtaatctgacagcctcatggggtggtacccctgctgag
actgatactaaatggactgaacctcactctacttcggatggactcacaaattccaagtct
agtaaaccacctattttggactctaattctgtggccaaatcaagtggggacattgaatct
gaacaaactgtaacttcaacctctactactaaaccttcatctggctggggtgaagtacct
gtgtctaattcatctaaatggggatcttctgtagatatcacgggtacctcttgttgggac
aatgtagtgtcaaaatcagacacaacttctgatcttaaaaccgtgagtagcagcaaagtt
tcacagtggttagagagtacaggagtgtcacttgcagatttagaatggggacaagaaaat
ttggataatgatgaaggatctgagggatctctagatgggtggaccacagcatctaaaaga
aatagggctcccaaaccagctaatgactcaaatgcgtggatgaacagatctctcaaacaa
ctgttagacatgggtttcaagcaagaggatgctgaaaaagctttgaaggcaaatcatatg
aacatcgagagtgcaataggggacctactggccatgaacatgagcgaaaacagggaacag
tctgtatcagttccaagtggaaaactccaagagcctgatcctgcagaagcagcaagaatc
caacagcaacagcagcaaggtcaaggtaaactaaaccgcaaacaacgaaggaaacttcaa
cagcaacagcaagccgagcaacaaactcttgaatcaaaaactgaacaaaggcaaggacaa
aatgaggtcgcagtttcaaagtctgtgactcaagtcagtgaatctgttactaaacctgcc
agtgaacaacaagacaagacttcagaaactcaatcaacttctaaaacggatgaagtacaa
caagactctaaaacaaaaacttccacgagcacaacaaaacctgaaaaacctccatcatct
gtagctggggcagtaaagcccataaatgggcaatcgcaattgcctagcaacggcaaaaga
tctggtccaccagtagtacctcctgccccaggcccaggggtacagggcccattgagacca
acacttgctcatccattacttcatcctcagtttgtacaacagatacatctgcagcagctg
agaatggctcagggaggtcttcttcagcctccattcacccctcagcagtttgctatgctg
cagcagatagctcaacttcagctcgttcaacagcgcctggctgcacagtctgttgctcag
caacacttaggacagaaacaacaggtagtgcctcaacaacaattgtatcaacagcaacag
cagattgcactcatgattgctcagatgcaacagcaagttctgcagcagcagcctgggctg
gccgggagacatcctgcattgccgtttactgcagtacaacaacaacaacagcagcaatct
ctactgcaacagcagcagcaacagcagtcacctaatgcacaacagaagggcaataaagcc
gcaactaatgacaaaccagcaacagaggcaccaacgagcaagacagcagacgctgttaag
tctcagcccagcgaaccatctgctgtttctcctgtgacatcagaagaacaacccaagcaa
ccttctcctgttactcagtctaggctcacacagtggaagcagccattgttacatgaacct
tcatcagcaccagtcactcagtccaccgtcactagcagcacaccagcctcagtggactcc
aaagctcagacaatatcagctccttcacaatcatcttcaggtgtgctaaccagtgtcgta
tcagctccatccatttcaaccagtgacctatctgattcctcagctccaaacagcaacaat
gtttctccacgggcacgaattcctgatccagtttcaagcaggtggggtgtggacgctggt
cccaagctgtctgctgacccacctgaatttaaaccaggtgtaccatggcgccctgctcca
aaatctgacaaaagagatgaagtgagagatagtgtttctcccaacaccgtggaaagctcc
agtcgtccatcttccactattgactcctcatcagatagctggtcgaatttgggaaaccaa
actgtcagtgcgcccagcagcgtacaacttggaagcaatgtaaaggtagcagacaatgtt
gtcactaccattgcaagttcttccttctcaggactgttggtcaataaccatacatttgag
tcaagtcaaatcgactttggcgtaggctcaaccccatggctaggcaataaagcccctgcc
ccacctgcgcaagcgacaagtagatctgcaggatccagtgctgcatcactgttgagacct
ccccctgggttgggatctgacaccactttacctgaatcccctctctttgacgaagagcct
cctgcttggttgaaaagcttaatagatggttccagtcttggaggcgataaaacccagcct
gagtttcagttcagtcgctttgggtttgcgaacagttcaacaccatggagtccaagagat
agcagtacgcagccgtttagtcctttgacacccaaccctcaaccttgggctgctgtcggg
ggtcctgctcctactctgtcatcgtcggcatcatctgtaactatggcaacaagtgaaaac
cgtagtggaagtgtgagcacaaccgagccatcatctttgcaaaactcagggatcatctgg
tcaacgaatcaacccataccgagtgctgaggagaagctctcagggaatttacctgggact
tctgtcccccctgtatctgcatctagcggtgttgctccttctagaactgctgtcaattcc
atgtcaacttggctggtactgcgcaatttgtcaccaaggatggatcccaagaccctccgt
cctatgtgcgagaggcatgggccactgctcacatttcagttgaatcttcgccatgggaac
agcttgatccgttacggcagcatggaagaagcggcaaaagcgagggcagcgttgaatggc
atgatgctggttggctcccaggtggcagcagacttcgctacagacagtgacatcggtagc
ttctttgagcaaaccatggattggagtgcaaacccatttcccagcaacacgtacggtaat
cagtggtcctttcagaacgtgcttggttctgcggcaacttcggacaatattcaatctaca
accaaagcaccgattggcaaggttccacccggagtatcaagcactgaacagcccatccca
aaagtaaataacaccacatctggaatgcagtggggatctacgatagggacactgccctcg
ccctcgcaaggccttgttgctggcgaacagtccaaggtcaatgcccccagccctcagtgg
gtaatcggctcacagggaagcgaacagcctggggcaaagcctaacactgcagctcccagt
gtaccatggggtagtgcacatggacacgcaccagcaccgtcctacttgtggggtacaggc
ccttcacagcaaacagcccttggtggaaacttttcccaagtacccagtatgtggtccttt
ccagctggagtcccacgtgatgtggagcctcagtcaggatcaggagacgggcttgtaagc
ccttccatgacgacattccttccccctggcctgttgaacggagggggagattcagtctga
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integrated database retrieval system
