Pocillopora damicornis (lace coral): 113671870
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Entry
113671870 CDS
T05773
Name
(RefSeq) LOW QUALITY PROTEIN: PH-interacting protein-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113671870
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
113671870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
ANAPC4_WD40
WDR54
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
113671870
NCBI-ProteinID:
XP_027043927
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MVNTEDEDVERELYFLIAKFLSKGPCVRAGLILIHAMLIVDPFLYVLSXLLRRRVDWRGE
EHDQTYEETVTENNHIPDDFLLRLAKRLGPLVEQCVPGSVEGYRSLLGAGRQNLLRISSE
PSKPSVSSLAVCYHGAPLLPPVKRRIPGNIGHVLCSREISGTSSIRNVAQPNLYTKISMH
RRILGHLSAVYCVLFDRSGKCIVTGADDSLVKIWSSEDGRLLATLRGHQAEISDIAISYE
NNLVAAGSCDKVIRVWSIKSTVPVAVLQGHTGMITSLQFCPSPLNESRYLVSTGGDGTVC
FWKWDLATLTFDSKPIRFIEKSRPGTQMVCSSFSPGGTFLVSGSTDHYIRIYQMTPGPPE
KIAELDLHNDHVDSIQFSHKGDRFLSGSRDGTARIWYFHRSAWRPILIDVSKRLPNSSPV
EESVRALKPRVTMVGWDLWDQHVITAVNDNTLKVWEAATGNLSLVLCGHQDEVFVLEAHP
TDPHVLLSAGHDGYVILWDLRTGVKITSFYNSLEGQGHGAVFDCKFSPDGLKFASTDSHG
HLCIFGYGSSDRYSQVPSEQFFHTDYRPLIRDSNNYVLDEQTQTDPHLMPPPFLVDVDGN
PHPLHFQRLVPGHGSNVRDPPRPALQPPPTPREDLPPLLAEIEAAEAQERQMIPAGLHSP
PPHGQGAVPPLQSPGGSRNYGMRQMGDVEGVRLVHGNVPVIQDVSESDTAAWRNRRIVPD
SKPSIAKSDVERRLLLGREEMLNYLREKKRRALPSTSKRVTVHVPEPRVAEERPQQAARR
TSNRRNAGQSSRGTRRQTYSTRATASMDVEESAEEEAAATPSDTEEEDEEDEWSESSSES
SEYSDWTEEVGLRTQQQTENRRPRRVCRVLSTSEEEGTEATQPGPSSPQRQPKVKKESKK
AKKPAKKKRPAKKPKVDEVQELLSLYQPPDWLICTVTRISPYVPQIGDEVYYFRQGHELY
VKEVIALKSYEINPKKQCFYKLRLKAEELCRIVSLHYSAGPPTLCCLKLALINPETGNST
GATFTVKYHDVPDVLDFLVLRQAYDASINQNWRPGNRFRSVIDETWWAGEITDRSPFQTD
FPDSHFQCFTVRWDTGEVERMSPWDLQPVTEHDPGNPDLSADASGAATSNIPLTDDDRLS
LAYDPDEESEWLGEGRETMSQRLVTGLEALSQLNFAGPFVYPVDVQQYPDYWSVVPYPTD
LNTIREKLLNKYYRRVTALLWEVKQLERNARLYNEEESQIVRNSMKLVSVLNAFIRDSTC
NDILSLCEDEEGIEDVEVQVENMSEESAGEGETSQDSTVPGSRKRKRESSSSESHNKHIK
REQAPPVEPWMQSAHELLDFLVSREDATPFRHPVDLNDFPDYTEVVAEPMDFSTVYRRLE
DNLYSDPETFVRDVRLIFSNSRAYNTMPRSRIYGMTIRLAAMFEDRVDSVLRDWYEAASG
GARRTRLRTMRLLESQAPNTNSVSRHRTSHSGHQAASNAAHYSGVNSGVDSLSARESRTR
SFTSDSEHRNGFGHAVTSRTETRTSPRVSSQSRIERDNDSVFDDTGSGRQTRSTRSSARR
ELVMRFSASRIQQNRQEESVSNGPPASRYSTRRSTSLARGSSSVNGEESDDEGEEEDGDE
EEEGSDEEEEEEEEQGEGSDEERGDEEQDEEEEEEEEDDEDDEEEDDEDEDEDEEEEDSD
DSAVQSRQQTRRKAARPTHRPTVTMRPNSKRSAKTGASRSDKRKSNTSSSRRTSDASQRN
ETPAPSRRSLRRNSSARRVHYNENDSDSGSDSPGNEIIGVSSRGRVRKPAIRMQDYVE
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacaccgaggacgaggatgttgaaagagaactttatttcctgatcgcgaagttc
ctctcgaagggcccctgtgtacgtgctggattgattttaattcatgccatgttgatagtt
gatcctttcctgtatgtcctctcttagcttttgcgtcgtcgtgtggattggaggggcgaa
gaacatgaccaaacctacgaggaaacggttaccgagaataaccacataccagatgatttc
ttactgcgattagctaaacggctcggacctttggtcgagcaatgtgtaccagggagtgta
gagggctatcgttccttgctcggagctggaaggcagaatttgttgcggatatcttcagaa
ccaagcaaaccaagtgtgagctcattagctgtttgttatcatggagcaccattattacca
ccagtaaaaagaaggattccgggaaatattggtcatgtgttatgcagcagagagatcagt
ggaacatccagtatcagaaatgtggcacaaccaaatctttacacaaaaatatctatgcat
cgcagaatacttggtcatctttctgctgtatattgtgtgctctttgacagaagtggcaaa
tgcattgttacaggtgctgatgacagcttggttaaaatctggtccagtgaagatggtaga
cttcttgccactttgagaggacatcaagctgagatatctgatattgcaattagctatgaa
aacaaccttgttgcagctggaagttgtgataaggtgattcgggtgtggtctataaaatcc
acagttccagtagcagtgctccagggacatacaggcatgataacttctcttcagttttgc
ccttcaccattaaatgaatcaaggtatctggtgtccactggtggagatggaacagtttgc
ttttggaaatgggatttagcaaccttaacttttgactccaagcctattagattcattgag
aagtcgcgacctggaacacagatggtgtgctcctccttcagtccaggaggaacattctta
gtgtcaggaagtacagatcattatattagaatataccaaatgactccagggccaccagag
aaaattgctgagttagatttacacaatgatcatgtggacagtattcaatttagtcacaaa
ggagacagatttctcagtggatcaagagatggcacagctaggatttggtattttcataga
tcagcatggagacccatcttgattgatgtcagcaagagacttccaaattcatcaccagta
gaagagtcagtcagagctctgaagccaagagttaccatggtcgggtgggatctgtgggat
cagcatgtgattacagctgtcaatgacaatacactgaaagtgtgggaagcagctacagga
aatctctcacttgttctctgtggacatcaagatgaagtgtttgtcttagaggctcatcca
acagacccccatgttcttctaagtgcaggtcatgatggatatgttattttgtgggatctc
cgaactggcgttaaaatcacgagtttctataattcacttgaaggtcaaggccacggggct
gtgttcgattgcaagttttcaccggatggcctcaaattcgcctcaacagacagtcacggc
catctgtgtatctttggttatggttcaagtgatcgttacagccaggttcctagtgaacag
tttttccacacggattacagaccacttataagagattccaacaactacgttcttgatgaa
cagacccagacggacccacatctcatgcctcctccatttctggtcgatgtagacggcaat
cctcatccactgcactttcagcgtctggtgccaggtcacggaagcaatgtccgcgaccca
cccaggcctgcccttcaaccccctcccacaccaagggaagatcttcctcccctactggca
gagatcgaagctgctgaggcgcaggaaaggcaaatgattccagcaggtcttcattcccct
ccacctcatggtcagggagcagtacctcccctccagagccccggaggaagccgtaactat
ggcatgcgtcagatgggtgacgtggaaggagttcggctggttcacggtaacgtgcctgtg
attcaggacgtgtctgagtctgacactgcagcgtggagaaatagacgaattgtgcctgat
agcaagccaagcatcgctaagagtgatgtggagagacggctgttactgggaagagaagaa
atgttgaactatcttagagagaaaaaaagacgagccttgccctcgacatccaaaagagtg
acggttcatgtaccagaaccacgagttgccgaagaaagacctcagcaggctgctcgtcgc
acctcaaatcggcggaatgccggacagagctctcgtggaacaaggagacaaacttactcc
accagagctactgcctctatggacgtagaggaatcagctgaagaggaggcagcagctaca
cctagcgatactgaagaagaagacgaggaagatgaatggtctgagagtagtagtgaatca
agtgagtactcggattggacggaagaagttggacttagaacacagcaacagactgagaac
cgccgtccaaggcgggtgtgtagagtactgagtacatcagaggaggaagggactgaagcg
actcagccaggtcccagctcccctcagcggcaacccaaggttaaaaaagaaagtaaaaaa
gccaagaaacctgctaagaaaaagagaccggccaaaaaacctaaagtagacgaagttcag
gagttactcagcttatatcagccaccagactggctgatctgcacagtcacgcgcatctca
ccatacgtacctcagattggtgacgaggtgtattatttccgtcaaggccatgaactgtac
gtaaaggaagtgattgcgctgaaaagttacgaaatcaatccaaagaagcagtgtttctat
aaactgagattaaaggctgaagagctgtgtcgcattgtaagtctgcattactcagctggt
ccaccaactctttgctgcttaaaactagctctaataaatccagagacaggcaacagcaca
ggagcaacgttcactgtcaaatatcacgacgtcccagatgtgttagacttccttgtattg
cggcaagcttatgacgcgtccataaaccaaaactggagacctggcaatcgctttcgcagt
gtcattgacgagacgtggtgggcgggcgagatcacggatagaagtcctttccaaaccgac
tttcctgactctcactttcagtgcttcactgtcagatgggacacaggagaggtcgagcga
atgagcccctgggaccttcagcccgtcactgaacatgatcctggcaacccagatctttcc
gccgacgcctcaggagcagcaactagtaacataccgctgaccgatgacgatcgactgtca
ctggcgtatgacccggatgaagagtccgaatggcttggtgagggacgggagaccatgtct
cagagattagtaacaggtctggaagcgctgagtcagctgaattttgcggggccgttcgta
tacccagtggacgtgcaacaatacccggattactggtctgtagtgccttaccctaccgac
ttgaacaccattcgggagaagctcttgaacaagtattacaggcgagttactgctcttctt
tgggaagtaaaacaactggaaagaaatgctcgtctttacaacgaggaagaaagtcagatt
gttagaaattctatgaaactcgtgtctgtgttgaatgcgtttattagggactccacgtgc
aacgatatcctttcactgtgtgaagacgaagaaggaatcgaggacgttgaggttcaggtt
gaaaatatgtccgaagagtctgcaggagagggagaaacgtcacaggattctactgtgcca
ggttctcggaaaagaaaacgagaatcatccagttccgaaagtcacaacaaacatattaag
agagagcaggcccctcctgttgagccgtggatgcagtctgctcatgagctgttagacttc
ttggtgtctcgtgaagatgccacgcccttccgacaccctgtagatctgaatgatttcccg
gactacaccgaggtagtggccgaaccgatggatttcagcaccgtttatcgccgattggaa
gacaacttgtatagcgacccggagactttcgtccgagatgtgcgcttgattttctcgaat
tcaagagcatacaacaccatgccgcgttcacggatctatggaatgactattcgtctggcc
gccatgtttgaggatcgtgtggacagtgtattgagagactggtacgaggctgcgtcaggt
ggtgcccgacgcaccaggttacggaccatgcggttgctagaatcacaagcaccaaacacc
aatagtgtgtcacgacatcgtacatcccattcgggacaccaggctgcctccaatgcagca
cattactcaggcgttaattccggcgtagattctcttagcgcacgagagagcagaactcgt
tcttttacgtcagattcagaacacagaaacggtttcggtcacgccgttacttcaaggaca
gaaacccgaacaagccctcgggtcagctcccaatcccgtattgaacgggataacgatagc
gtttttgatgatacaggaagtggtagacagactagatcaacaaggtcaagtgcacggcgc
gagcttgttatgcgtttctctgcttcaaggatacaacagaatagacaggaggaaagtgtt
tcgaatgggccgccggcgagtaggtattcaacgcgcagaagtacgtccttagcgcggggt
tcttctagtgtaaacggagaagagagtgacgacgaaggagaagaagaagatggagacgaa
gaggaagagggtagcgacgaagaagaagaagaagaagaagaacaaggtgaaggaagcgat
gaagaaagaggagatgaagaacaagatgaggaagaagaagaagaggaggaggacgacgaa
gacgatgaagaggaagatgatgaagatgaagatgaagatgaagaagaagaagacagtgac
gacagcgctgtgcagtcacgacagcaaactcgtcgaaaggcagctcgacctactcaccgg
cccactgttacaatgcggccaaattcaaagcgctctgctaagactggtgcgtctcgctca
gacaaacgaaaatcgaatacgagttcttctcgtaggactagcgacgcgtcgcaaagaaat
gaaactcctgcgccttcgcgacgaagtttacggagaaattcgtctgcgcgtcgcgtgcat
tacaacgaaaatgactcggacagcggaagtgattcgcctggaaacgaaattattggagtt
tccagtcgtggtagggtgaggaaaccagctataagaatgcaggattatgttgagtaa
DBGET
integrated database retrieval system
