Pocillopora damicornis (lace coral): 113672002
Help
Entry
113672002 CDS
T05773
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdam03037
]
113672002
Cilium and associated proteins [BR:
pdam03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113672002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_6
TPR_14
TPR_8
TPR_16
TPR_19
TPR_7
TPR_11
TPR_17
ANAPC3
TPR_21
TPR_9
TPR-S
TPR_10
TPR_20
TPR_15
SHNi-TPR
RhlB
Motif
Other DBs
NCBI-GeneID:
113672002
NCBI-ProteinID:
XP_027044072
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MLQGVHLVGEDEDDVYGGFNDYNPAFDTENLEEDEEFQQALKTSHGQRPGLKTGMKISTS
AGRGKVPGSSMGRPTTGIADTGMARPMTAVRAVGYTSSEKTSMTGGAQFDPFNQARLPAP
PLEGKAEESPEEKIKQMEKKVNELVEESCFANDRGEYPLALEKAKEAGRKERALCRQREQ
SSLGEQVNLDMTYSVLFNLANQYHANKLYAEALNTYQVIVKNKMFSNAGRLRVNMGNIYC
EQKKYPQAVKQYRMALDQVPNTHKDMRIKIMQNIGVAFVKIGQFSDAVTSFEHIMGEKAS
FQTGFNLLLCYYALGDKEKMKKTFQKLLTVSLGFDDEDKYTLTGDDPQQALILEVIRNDR
LRQIERQKKSQADKCIMSAAKLISPAIESSFAAGFDWCIECVKASPYLDLANELEITKAI
TYLKEKDLAKAIETLKGFEKKDSKVQSTAATNLSFLYFLENEVSQADKYAELAITADRYN
PAALVNKGNCLFANGEYEKAREYYQEAYNVEASCTEALFNLGLAEKKLNRLGVALDCFYK
LQAILKNHPQVLYQIASIHEMLEDKSQAIEWYMQLVSVVPTDPSVLSKLGELYDSEQDKS
QAFQYHFESYRYFPSNIDIISWLGAYYIDSQFCEKAIHYFEKAAVIQPNEVKWQLMIASC
YRRSGNYQQALETYKTIHKRFPENVECLKFLVRICTDLGLKDVQDYAQKLKKAEKAREMK
QQRSNSGSRKGSGRAGSANMPGSGGSRNNSAGSESGRVDSGGSDRRRSANRSAGRTKPFI
PDNDDSFSFSGSKEVDATYADPLGEAPARPKTAGRQRPQQVEDEFGDEEIGDDLLPD
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaggagtgcatctcgttggtgaggatgaagacgacgtctacggtggttttaac
gattacaatccagcctttgatacagagaatcttgaggaagatgaagaatttcaacaagcc
ctgaaaacaagtcatggacagagacctggtttgaaaactggcatgaaaatatccacatca
gctgggcgagggaaagtgccaggatcttcaatgggacgaccaacaactggaattgcagat
acaggaatggctcgtcctatgactgcagtgcgtgcagtgggttacacatcatcagaaaaa
acatccatgactgggggtgcccagtttgaccctttcaaccaagcacgtttacctgcccct
ccccttgaaggaaaggcagaggaaagtccggaagagaaaattaagcaaatggaaaagaaa
gtaaatgaactggttgaagagagctgctttgctaatgatagaggagaatatcctctggcc
cttgagaaagccaaagaggcaggcaggaaagaacgtgccttatgtcgtcagagggaacag
tcatctcttggagaacaggtcaatctggatatgacttactcggtgttgttcaatctggcc
aatcagtatcatgccaacaaactgtatgcagaggcactgaacacttaccaggttattgtc
aaaaacaagatgtttagcaatgcaggacggttaagagtgaatatgggtaatatctactgt
gaacaaaagaaatatccccaggcagtgaaacagtatagaatggccttggatcaggtgccc
aacacacacaaggacatgaggataaagatcatgcaaaacattggtgtggcatttgttaag
attggacagttttcagatgctgttacttcttttgagcacattatgggtgagaaagcaagt
ttccaaacaggattcaacttgcttttgtgctactatgcattgggagacaaagaaaaaatg
aagaagacttttcaaaaattgctaacagttagccttgggtttgatgacgaggacaagtac
actttgacaggggatgatcctcagcaagcattgattttggaagtaataagaaatgacagg
ctgcgacaaattgaacgtcaaaagaaatcccaagcagataaatgcattatgagtgctgct
aaactcatatctcctgcaatagagagtagttttgctgcaggatttgactggtgtattgaa
tgtgtaaaggcatctccttacttggatttagccaatgaattagaaatcaccaaggcaatc
acttacttgaaagagaaggatcttgctaaggccatcgaaactctcaaaggatttgagaag
aaagactccaaagtacaatccactgctgccaccaacttgtccttcctatactttctggaa
aatgaagtgtcacaggctgacaagtatgcagaacttgccataacagcggatcgatataac
cctgctgcattggttaacaaagggaattgtttgtttgccaatggggaatatgagaaagca
cgagaatattaccaggaggcttacaatgtagaggcttcttgtactgaagctctgtttaat
ttaggtcttgcagagaaaaagttaaacagactgggtgttgctctggactgtttttacaag
ctgcaggccatacttaaaaatcatcctcaagttctttatcaaattgcaagcatacatgaa
atgttagaagacaaatctcaagccattgagtggtacatgcagcttgtctctgttgtgcct
actgacccatcagtcctgtccaagctaggtgaactgtatgacagtgaacaagacaagtca
caagcattccaatatcactttgagtcatacagatattttccatcaaatattgatattatt
tcatggcttggagcttactacatagactctcagttttgtgaaaaggcaatacattacttt
gaaaaagcagcagtcatacagccaaatgaagtcaagtggcagcttatgatagcaagttgt
tatagaagaagtggtaattatcaacaggctttggaaacatacaaaaccatacataaaagg
tttccagaaaatgtggaatgtcttaaattcttggtgagaatttgcacagatcttggttta
aaggatgttcaagactatgctcaaaaactgaagaaagcagaaaaagccagagagatgaag
caacagcgttctaacagtggatctagaaaaggaagtgggcgagctggaagtgctaacatg
cctggttctggtggttcacgcaataacagtgcagggagtgagtcaggacgagtagacagt
ggaggatcggacaggaggagaagtgccaaccgctcagctggacgaacaaaaccattcatt
ccagataatgatgactcatttagttttagtggatcaaaagaagttgatgccacttatgca
gatcctcttggagaagctccagcaaggccaaagactgctggcaggcaaaggccacagcaa
gttgaggatgaatttggtgatgaagagattggagatgaccttcttcctgactag
DBGET
integrated database retrieval system
