Pocillopora damicornis (lace coral): 113672246
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Entry
113672246 CDS
T05773
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113672246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113672246
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113672246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113672246
NCBI-ProteinID:
XP_027044360
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MADEAMDLNIPRFSSELRSLRCEQSLLNKTDGSASFFQGNTHVMAAAYGPAEVRSSKELI
DKATLEVVFRPKVGLPGCAEKLLERVIRNSCEPVVLTSRHPRSSLTIVVQLVQDSGSLLA
CAINAACMAMIDAGFPMKCLVCAVSCALNESGDIQLDPSLEKEKSACAVMTFAFDSANKN
VMTSSTTGSFTVQEYDRCLEACRSAATKLFDFFRLSVERKLSKDAKFMDINIA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaggcaatggatttgaatattccacgattttcatcggagttgaggtctctg
cgatgtgaacagagcctcttgaacaaaacagatggatcagcaagcttttttcaagggaat
acccacgtgatggcggcagcttatggtccggcagaagtcagatcaagtaaagaactcatt
gacaaggctactctagaagttgttttcagacccaaagttggcttaccaggctgcgctgaa
aaacttttagagagagttatccgcaacagttgtgagccagttgtgcttacctccagacat
ccccggtcatccctcacaattgttgttcagcttgttcaggatagtggatcattactggca
tgtgcaatcaatgctgcttgcatggcaatgattgatgctggttttccaatgaaatgttta
gtttgtgctgtatcatgtgcattaaatgagtctggtgacattcagctggatccttccctg
gagaaagaaaagtcagcttgtgcagtgatgacatttgcgtttgatagtgccaacaaaaat
gtgatgacctcatcaacaacagggagttttacagtacaggagtacgacaggtgtctggaa
gcatgtcgctctgctgctactaagctatttgacttcttcagactatctgtggaaaggaag
ctttccaaggatgctaagtttatggacataaacattgcatag
DBGET
integrated database retrieval system
