KEGG   Pocillopora damicornis (lace coral): 113672454
Entry
113672454         CDS       T05773                                 
Name
(RefSeq) collagen alpha-5(IV) chain-like
  KO
K19719  collagen type II alpha
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113672454
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pdam00536]
    113672454
Glycosaminoglycan binding proteins [BR:pdam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113672454
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 113672454
NCBI-ProteinID: XP_027044538
LinkDB
Position
Unknown
AA seq 768 aa
MKTQLVWCFAVIFVGSVTAKSIHSVARRCGCTSAVCPPPDAPCPPPPAPPAPVPPGPPGP
PGLPGSNGCQGPPGMAGCPGLKGPPGSGGPLGPPGPIGLPGKPALPGPPGPPGCMGLPGL
PGCAGMKGPAGPVGPPGPVGPAGPPALPGPPGLPGKIGCAGAPGCPGFKGEPGAMGPIGP
PGAPGKPALPGPPGQPGSMGPPGLPGCSGMKGCNGSPGAPGFVGPAGPPGPPGSPGPPGP
PAEPPCAPCGGGCCGKMNSKIIFLFVLAFVCYAHARSTKGTKRCCPCCPPPPPPPPPVQQ
VAGPQGPPGQSGCSGPPGAPGCPGWKGCPGPVGLPGPPGAPGPLGPIGPMGPKGCAGSPG
LPGCPGLKGCPGCAGPPGPPGAPGPQGVPGAAAPVPCPPPPPTPCCPAPACCKTDRTTKG
AILAETFGTLLFLGSTNDCFLFPLIGRSNKMDFKIIVLVVLISVVYVSEGKPYEEFLNKV
LRSNPLPCSRSCCEKCCTNVCRRDCIFSCCAARPLGPYPPPPAPPPPYPAPTPQLIPGPP
GFAGICGLPGPHGPRGCPGCVGPPGPPGPPGPPGRSKRAAFPCGAGCLPQCAPNCLADCC
GSPPPAPPDPPLPAVSDMMKPQPAPIVGPQGHPGSQGSPGVMGPVGPPGIGGAPGPPGPP
GPPGPPAPPAPPAPACCAVPPPGKLNMNIRILLLIAIGLVLCAADPIKTKRDAQYNYMYP
GSEGSQGPQGPIGNAGRRGPTGDPGPPGPPGPPGPPGPPAPPGPAGRR
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgaaaactcagctggtatggtgtttcgcagtcatcttcgttggctccgtgaccgccaag
tcaattcatagtgtcgccaggcgatgtggttgcacatctgctgtttgtccacccccagat
gcaccttgtcctcctccacctgcccctccagcaccagtaccacctggccctccagggcct
cccggactaccaggctctaacggatgtcaaggtcctccagggatggccggttgtcctggg
cttaaagggccaccaggcagtggagggccactcgggccaccggggcctattggacttccc
ggtaaacccgctcttcccggtccacccgggccacctggctgcatgggattacctggcctc
cctggatgtgcgggaatgaaaggaccagcaggaccagttgggccgccaggcccggtagga
ccagcaggaccacctgccctcccaggccctcctggactacctggaaaaataggctgtgct
ggtgctcccggatgccccggtttcaaaggcgagcccggagcgatgggaccaataggacct
ccaggagctccaggaaaacccgctcttcctggccctcctggccaacccggaagtatggga
ccgccaggtctccccggttgcagcggcatgaaaggatgcaacggcagtcccggagcccca
ggatttgttggccctgctggtcctccaggacccccaggatctccgggtccaccaggacca
cctgctgagccaccgtgcgccccttgcggtggtggctgctgcggtaagatgaattccaag
ataatatttttatttgttcttgccttcgtctgctacgcacatgctaggtcgacaaaaggc
accaaacgttgttgtccctgttgtccacctcctccaccaccaccaccaccagttcaacag
gtcgctggaccacagggaccacccggacaatctggatgttctggtcccccaggagctccc
ggatgcccaggatggaaaggatgcccaggaccagtcggtctcccaggacctcctggtgcc
cctggacctctcggaccaataggaccaatgggacctaaaggatgcgctggaagcccaggc
ctccccggttgccccggactcaaaggatgcccaggatgtgccggtccaccaggacctcca
ggagctcctggacctcagggagttcccggagccgctgccccagtcccatgcccacctcca
ccacctactccatgctgccctgctcccgcatgctgcaaaacagacagaaccacaaaaggt
gcaatcctggccgaaacgttcggaacactgctattccttggtagtactaatgattgtttc
ctatttcctttaataggtcgctcaaacaaaatggactttaaaattatagttttggtggtg
ctgatatctgtggtttatgtctccgaagggaaaccatatgaagaattcctcaacaaggtc
ttaagaagtaatccactgccttgttctcggtcctgttgtgaaaagtgttgcacaaacgtt
tgtagaagagactgtatattttcgtgttgtgcagcccgtccactcggcccatacccacct
ccccctgcaccgcctcccccatacccagccccaacaccacagctcatccccggaccgcca
ggattcgcaggaatttgtggattgccaggacctcatggacctagaggatgccccggctgc
gttggaccaccaggaccacccggacctccgggacccccgggacgctcaaagcgtgcagcc
ttcccatgcggagctggctgtcttccgcagtgtgccccaaactgccttgcagactgctgc
ggtagtcctccaccagcaccacccgacccacctctcccagctgtgtcagacatgatgaag
cctcagccagcacctatcgttggaccacagggacatcctgggtcacagggttccccagga
gtgatgggacctgtaggacccccgggaattggcggagcccccggacctccgggaccaccc
ggaccaccaggacctcctgcaccccctgctccacctgctcctgcgtgttgtgcggtgccg
cccccagggaaactaaacatgaatatccggattctgctgttgattgccattggactggta
ctctgtgccgctgatccaatcaagaccaaaagggatgcgcaatacaattacatgtatcct
ggttccgaaggatcccaaggcccccaaggccctattggtaacgcgggaagacgaggacca
accggagatcccggaccaccaggaccacccggacctcctggaccacccggaccacccgct
ccaccaggccccgccggaagaagataa

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