Pocillopora damicornis (lace coral): 113673939
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Entry
113673939 CDS
T05773
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113673939
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113673939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
113673939
NCBI-ProteinID:
XP_027046213
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MSGTRLTRKVTVEGSKKLPEGSSQSSSSSSGTRRSVFDRLGPGTSERSRSRESYPPEKCR
NWLRDGRCQFGRNCKFLHGPFSEPKSRTKSVRSIVRTDVDRSEGDDSAITVRTQSLDSLE
PDDDDEKEISVLKKKKHRPLEESSEPSKKSEKLKRRQQIDQDSSQGEGDDGDDHRKRKKK
VRKRQLSGGVVITKPESPEEEERDWGDEDYEEERSDLEWEERGELDYERQLNLEKRRQDL
QRQLALMDEEDAKREKAERKVKDVKKERDEDLKPAIPVVHSKLHPEKSSVSPADEFSPVS
SQSTPKKKKKKADGEGKKVKAKRKISPSTKELKKRKGVKPAAGGSNGGIVEERPQKVTDV
SPEKPKASVRTQPEFEETATEKPRVPKKKQVKPKKKESQVTRSSGDSYLSPTGSSGQIPP
RTLPPEEIPREKRSPTPEEQRVPVEKLRRRTALSSPEGSNSPAPPYGSESRTRRSTDPSD
GSLRKTVREVHNNEPPGEAEHKVKVKGHEKPYREERSPGTPEHGRRVVAIKDTRHLEEGR
SERRKKVVEEEPPRSPSPEDIPARDPITPPGEQRRHRTTPPRGDRRGPQTPPGEPDYDDA
PKQGSSDRGAPRHRGPYTPPTPSNPPVRSRDERNREEFHDGRSESLPYREEASVPRSKER
PERDTRYSRQRGDDGVDDMSRGSRGHASVDEDYPRARLRDEEPGRLRHRNERQDDYHQRN
RPKDDRSDDFYRARDREPDRSDDHYRSRAEEPRGGEPPRRKPEVDEEYLRRREDRDEDHL
RSRNRELERDEERSRRRDDRSDDHQRGRVRDEHEDDMQRPRGGRDFPRRPFEGGDERHWE
GRGERDNREVQFSDRDRRRPDMPRQDISDNRSRERAGERPRDREGRYPPPGPGPDYHRRS
PPIPHGSRRSPPPHGPPRGPHRFEERRRSLSPGGRREEGYRQGPPRDQGGYGMGRESAHG
RGGHSAPFENRGRPVESRRRISPPPRQYAERGRGAPRGRGIRGGRGFPDRSRPPGDRYQD
PPRDRAAPWDPERRRERDHPRDRNRPHDESRDRDRRPRGELSPGRGPRHWEDRRAGSPGR
VVSPSRDRRTHEQEKIPREAEEERRRRSDEEEDEEWEYEEDLGDEKDKIPRQGERKRPRE
TGSSISTIESPAGGKKRRSETPEMEVTPGGEVPEGVVKQDDYEKDVIAAAPVKQTAKPKK
KKVGKKGKGPKPDGEPDVETQKPPEPPAESEESPEGEKPFKVEKKLKKEKGKTKEKVTKK
KKKNIGVVASEPGLGPEKTEEPTSVTEESGVASSENLGEVTQQSEEELIPKVAKKRRHPV
APDGEETKMKGGDKPPKKKKKKKHQPEVIVQPWADLEDEDEEMVQYKSEGNERQGSVKGS
QFGQVGDIDENKSSDTVADGRKETGDAPKDEESVTVFSDWSDDSPIGDDAWSDVNEPEIS
ERKPKINDKERAATMSPVRNEAPTFDDVYDPISDDELDAMLGDDDEDARAGVSDSKGPSS
APMAVEDVDWSALVSAQNTSDKTGEEPGAHLKRFTPGHVFSRIGISSSLAGPRLTKLVQK
AYAEVAKDKPSVTETGDTSDVDDGGDSRVINSIGALVAGAAAKRRERGTLFTDVGPCRRA
LCARMDLAMRKRLRRLTGKVGLFQVPSSAPVDNELYSMSVALYKHEHSAMDSSVTKLIPS
RVGAVLATVNS
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggacacgtttgacaaggaaggttacggtagaaggaagtaagaagcttccagaa
ggaagtagccagagttcgtcatcgagctcaggaaccaggcgaagtgtttttgacagacta
ggtccagggacaagcgaacgttcaagatctagagagtcatatcctcctgaaaaatgtaga
aactggttgcgagatggaagatgtcaatttggaagaaattgtaaatttcttcacggacca
ttttctgaaccaaaatcaagaactaagagtgtcagaagcattgtgagaactgatgttgac
agatcagaaggagatgatagtgccattactgttcgaactcaaagtcttgatagtttagag
cctgatgatgatgatgagaaagaaatttcagttctgaaaaagaagaaacatagacctctg
gaggaatcctctgagccaagcaagaaaagtgagaagctaaagagacgacagcagattgat
caagactcatctcaaggtgagggggacgatggggatgaccaccggaaacgaaaaaagaaa
gtgagaaagcgtcaactcagcggtggagttgtcatcaccaagcccgagagtccagaggaa
gaggaaagggactggggagacgaagattacgaggaggaacgtagcgatttggagtgggaa
gagcggggtgagctggactacgagcggcagctaaatttagagaagagacgacaagatctt
caacgccagctggctcttatggacgaagaggacgccaagagggagaaggccgaacggaag
gtgaaagatgtgaagaaagagagagatgaagacctcaaacctgcgattcccgtggttcat
agcaagctgcacccagagaagtcgtccgtatctcctgcagatgagttttcaccagtctcc
tcacagtcgactccgaagaaaaagaagaaaaaggcggatggggaagggaagaaggtgaag
gcgaaacgtaagatctctccgtcaacaaaagagctgaaaaaacggaaaggtgttaaacca
gctgctggaggttcaaatggtgggattgtggaggaaagacctcaaaaagtgacagatgta
tcacccgaaaagcctaaagcatctgttcgaacgcagcctgagtttgaggaaacagctaca
gaaaagccacgggtcccaaagaagaagcaggtgaagcccaaaaaaaaagaaagccaagta
accaggagttctggggatagttatttaagtcccacgggttcctctgggcaaatacctccg
cgaactcttccaccggaggagattccaagggaaaagagatcacctactccggaagagcaa
agggtacctgtggaaaaactgcgtcgtagaacagctctatcgtctccagaaggctctaat
tctccagcccctccctacggcagcgagagcaggactcgcaggagcacggacccttccgac
ggaagtcttcgaaaaactgttcgtgaggtccacaataacgagccgccgggagaagcagaa
cacaaagtaaaagtgaaaggccacgagaagccttacagagaagaaagatcgcctggtaca
ccagaacacggacgaagagtagtggcaataaaagatacacgtcatttggaggagggaagg
agcgagagacgaaagaaagttgttgaggaagaaccaccgcgcagcccatctcccgaagat
atccccgctcgggaccctatcacaccacccggggaacagcgtagacataggaccacaccg
cccaggggagacagacgaggaccacagactcctccgggtgaacctgattacgatgacgca
ccaaagcaaggctcaagtgaccggggtgcccctcggcaccgtggaccctacactccacct
acccctagcaatcccccggtgcgcagtcgagatgaaagaaatcgcgaagaatttcacgac
gggagatctgagtcgctgccttatcgcgaggaggcgtctgtgcctcgaagcaaagagcga
cctgaacgtgataccaggtactcaagacagaggggtgatgatggggtcgacgacatgtcg
cgaggtagccgaggtcatgcttcagtagacgaagattatccgagggcccgacttcgagac
gaagaacctggcagactaagacatcgcaatgaacgtcaggacgactatcaccaacgcaat
cgcccaaaagatgaccgaagcgacgacttttaccgagctcgagatcgtgagccagatcga
agtgacgaccattaccgaagccgggcagaagagccccgaggcggtgaaccaccacgcagg
aaacctgaggtagacgaggaatatcttcgaagacgcgaagatcgcgatgaagatcattta
cgttcccgcaatcgagagttagagagagacgaagaacgttcgcgacggagagacgatcgc
agtgacgaccatcaacgaggccgtgtccgtgacgagcacgaagatgacatgcagaggccc
cgaggtgggcgtgattttcccaggcgtccgttcgaagggggagatgaaagacactgggaa
gggcgcggtgaaagagacaacagagaggtgcagtttagcgaccgggatagaaggagaccg
gatatgcctcggcaagacatatctgataaccgcagccgtgaaagagccggagagagacca
cgtgacagagaaggtcgttatccaccgcctgggcctgggcctgactatcacagacgttcg
cctcccatcccccacggctcacgtcgatcacctccaccccatggacctccgcgcgggccg
catcggtttgaagagcgaagacgtagtttatctccaggaggacgcagggaggagggttat
cgccagggtcctccacgagaccaaggcggttatggtatgggacgtgagtcagcgcatggg
agaggggggcactccgcgcctttcgaaaaccgcggtcgacccgtcgagagtagaagaaga
atttcaccccctcctagacagtatgcagagcgtggccgaggtgccccgcgaggcagagga
atcagagggggccgaggttttcccgacagaagtcggccgccaggggaccggtaccaagac
cctcctcgtgatagagcggcgccatgggatcccgagcgccgacgtgaaagagatcatcca
cgcgaccggaatcgtccgcacgacgaatcgcgtgatcgggacagacgtccgagaggtgaa
ctgtctccaggccgaggtccaagacactgggaggataggagagctgggagcccgggacga
gtcgttagcccatcgcgcgaccgccgtacgcatgagcaagagaagataccgcgtgaagca
gaggaagagcgcaggcgtcgttcggacgaagaagaagatgaagaatgggaatacgaagaa
gatttaggagacgaaaaagataagataccacgacaaggagaaagaaaaagacctagagaa
acaggctcgtccatatcaaccatcgagtcgcctgcgggagggaaaaagcgccgaagtgaa
acccctgagatggaagtaacgccaggaggggaggtgcccgaaggagtcgtaaaacaggat
gattatgagaaggacgtcattgccgcagctcccgtcaagcaaaccgcaaaacctaagaaa
aagaaggtggggaaaaaagggaaaggtccaaaacctgacggtgaacctgatgttgaaact
caaaaaccaccagagccgcctgcagagtcagaggaatcgccggaaggtgagaagcctttt
aaggttgagaaaaagctgaagaaagaaaaaggaaagacaaaagagaaggtgacgaaaaag
aagaagaagaacatcggtgtggtggcatcagagcccggactgggcccagaaaaaaccgaa
gagccaacgagcgtgacggaagaaagtggggtagcgtcgtcggaaaatcttggagaagta
acacaacagtccgaagaggaactgattccaaaggtggctaaaaaacgccggcatccagtt
gctcctgatggggaggaaacgaagatgaagggtggtgataaaccaccaaagaaaaagaaa
aagaagaaacatcagcccgaggttatcgttcaaccttgggctgaccttgaagacgaggat
gaagaaatggttcaatacaagtccgaaggtaacgagcgccagggtagtgtcaagggtagt
cagtttggacaggttggggacatcgacgagaataaatcgtcagacacagttgcagatgga
aggaaggaaactggagatgctcccaaagatgaggaatccgtgacagtgttcagtgattgg
agcgacgatagtcctatcggagacgacgcgtggtcagatgttaacgaaccggagatttct
gagaggaaaccgaaaatcaacgataaggaacgcgcagctacaatgtcaccagttcggaat
gaggcgccaacattcgacgatgtttacgacccaataagcgacgatgaacttgacgccatg
ttaggggacgacgatgaggatgccagagctggggtttctgatagtaaaggtccatctagt
gctcctatggcggttgaagacgttgattggagcgcgttggtctctgcgcaaaacacctca
gacaaaacaggagaagaacccggagctcacttaaagcgctttacaccaggtcacgtgttc
tcacgcattggaatctcttcgtcgcttgctggtccgcggttaaccaaattggtgcaaaaa
gcgtacgctgaggtggcaaaagataaaccttcagtgacggagacaggtgacacgagtgat
gtcgacgatgggggtgattcaagagtcataaacagtattggtgcgctggtggcaggtgcg
gctgccaaaaggcgcgaaagagggacgttattcacggacgttggaccttgcagacgtgca
ctgtgcgcccgtatggatctggcgatgagaaagcgactgaggaggctgactggcaaggtc
ggtcttttccaagtgccatcatccgccccagtcgacaacgaactttattccatgagcgtg
gccttgtacaaacacgaacattctgccatggactcttctgtgacgaagttaatcccctcc
agggtgggagcggtgcttgccacagtgaattcttaa
DBGET
integrated database retrieval system
