KEGG   Pocillopora damicornis (lace coral): 113678751
Entry
113678751         CDS       T05773                                 
Name
(RefSeq) symplekin-like
  KO
K06100  symplekin
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113678751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdam03021]
    113678751
   03019 Messenger RNA biogenesis [BR:pdam03019]
    113678751
Transcription machinery [BR:pdam03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     113678751
Messenger RNA biogenesis [BR:pdam03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     113678751
    U7-dependent histone pre-mRNA processing factors
     113678751
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N Cnd1
Other DBs
NCBI-GeneID: 113678751
NCBI-ProteinID: XP_027051464
LinkDB
Position
Unknown
AA seq 1087 aa
MAASSRARVRLSEASQAFLNDDADARASGEYSAEDSTSEKVIDLLNQAQLEKENKLNCLK
QVQEFIVNKDPTLLDNFLDEILVFQQDRSADVRKFVVGFIEEACKKDIELLSKVLNNLGF
MLNDDNVAVQKRVMLCFTQLYKYALQYICKQKAISEELERMWELLIQIKEQIIDMLESDN
DGIRTHAIKFMEMLVLVQSLKTQDSESLKKGEADISLEIVPRNHPLIKMTELREEGGSTL
ESLLTLIASHTISSVNLMASLGSLSAIARQRPAFMSIVVQAFESLHANLPTSLSKSQVSS
VRKNLKLHLMSLMKHPSSIEFLPQITTLLTDLGASQAELQRNMPKASAEKRRSEPEAATS
KKPKLDTEEIETMSASDAVDMTAQDIIPRLNKDTVTDLVLVSMLALPDSIPSHFHDTYTP
IAAAGGQAQVVHLARLLATQMNAAKIGKGYERMEALRKAQNDPRMKEESMSIPVIGGPGF
NGPGAEDDPVFMFGVPKPEEDSALQRMLGGHLEATKEKRPMDIKKTPFVPKEPAVPQLRM
RKIKPFKLSDVTRELNPDERQSMMTNAVSRILASEGSAARSGVTQERINLIVGLVTQLGG
DLKMVLQEFIQEEIRSRYDLLMSWLYQEYASSEIEGIDEDSDLRQSYSDCLLNLMDGLYA
KLDPKDKLFTRILLDIPALTDGAVMAVRMYCEDLNLNLLVSTFLVHPRLAKVYTASSQII
KRIILRHLEHPVRAIGMASPELLQLVENCPTGAETLIARILNIITDKAVPTDELVKRVKE
LYHKRVSDVRFLIPVLTGLKKQEIIAVLPKLIKQSPSVVKEVFNRLLGCFHSDSKVSATS
PLSPSELLVALHQIEAKSDMKSVMKASSLCFAEKTIYTQEVLAVVLHQLMEMNPLPTLFM
RTVIQSLSICPRLVGFVMNILAKLITKQVWKQPKVWQGFVKCCQMTKPQSFSVLLQLPSR
QLESVFEICPELKENLVLHVQSFTPHQRAHIPRSLLQILEKDGKKDEKKPKPEKPDKEQI
DPEEEEEEEEEEDSTKGDKSPKWTRSHTREALKDKRKSRRSRSRSRSPRKKREKSAGEES
ASEGEIN
NT seq 3264 nt   +upstreamnt  +downstreamnt
atggccgcaagtagtcgagctcgtgttcgactttcggaagcttcacaagcctttctaaat
gacgatgcagacgcccgagcttctggagaatattctgctgaagattctacatcagaaaag
gtaattgatttgcttaatcaagctcagctggagaaggaaaacaaactgaattgtctgaaa
caggttcaagagttcattgtgaacaaagacccaacccttcttgataattttttggatgaa
atcctggttttccagcaagatcgatcagcagatgtacgtaaatttgtggttggattcatt
gaggaggcatgcaaaaaagacattgagctgttaagcaaagtgctcaacaatctgggtttt
atgttgaatgatgataatgttgctgttcagaagcgagtcatgctgtgttttacacagctg
tacaagtatgctttacagtacatctgcaagcaaaaagcaatatctgaagagctcgaacgc
atgtgggagcttctcatccagataaaggaacagattattgatatgctggaatctgacaat
gatggaataagaactcatgctataaagtttatggagatgcttgttcttgtccagtcactt
aaaactcaggattctgagtcactgaagaaaggtgaggctgacatctcattggagatagtt
cccaggaatcatcctctaatcaagatgacagaactaagggaggaaggaggatcaacactg
gagtctctactcaccctcattgcatctcacaccatctccagtgttaacctcatggcttcc
cttggatccctgtcagcaattgctcgtcaaaggcctgcgttcatgtccattgtcgttcag
gcatttgagtctctccatgctaatcttccaacctctctgagtaaatcgcaagtcagcagt
gttaggaaaaatctgaagcttcatctgatgagtttgatgaaacatccatcttcaattgag
ttccttccccagattaccacacttttaacagatcttggggcttctcaggctgagcttcaa
aggaatatgccaaaagccagtgccgagaaaagaaggtctgaaccagaagcggcgacttca
aagaagccgaagcttgatactgaagagatagagacgatgtctgcatcagatgcggtagac
atgacagcacaggatattatccccagactcaacaaagacactgtaacagaccttgtactg
gtcagcatgttggctcttcctgacagcattccttcccacttccacgacacctacaccccc
atcgccgccgcaggtggacaggcgcaggttgttcatcttgctcgactgttagccacccag
atgaatgctgccaagattggaaaaggctatgagagaatggaagctttgcgaaaggctcag
aatgacccacgaatgaaggaggagagtatgtcgatccccgtgattggtggaccaggcttt
aacgggcctggcgctgaggacgatcctgtgtttatgtttggtgtacctaaacccgaggag
gattcagcattgcaaaggatgttaggtggacaccttgaggcaactaaagaaaagagaccg
atggatataaaaaagacgccatttgtacctaaagaacctgctgtccctcagctgcgcatg
aggaagatcaagccattcaagttatctgatgtgacaagggaattgaatccggacgaacga
caaagtatgatgacgaacgctgtcagtagaatacttgcctccgaaggtagtgctgcaagg
agcggagttacacaggaacgcatcaatctcattgtcggacttgttacacaattgggaggg
gatcttaaaatggttctccaagaatttattcaggaggagatccgatcccgatatgatctg
ttgatgtcctggctatatcaagaatacgcatcatcagaaattgaaggaatagatgaggat
tctgacctgcgccaatcgtacagtgattgtcttctaaatcttatggacggactttacgct
aaactggatcctaaggataaattgtttactcgtattcttcttgacatcccggcattaacg
gacggagcagtaatggcagtgagaatgtattgtgaagacttgaaccttaacttacttgtt
tctacttttcttgtccatccaaggttggccaaagtatacacagcttcctcgcaaatcata
aaaagaatcattctcagacaccttgaacatcctgttcgcgcaattggcatggcttctcct
gagctcttgcagttggtggagaactgtcctacaggcgctgaaactcttattgccagaatc
ttgaacattattaccgacaaagcggtgcccacggatgaactggtgaagcgagtcaaagag
ctttaccacaagcgtgtgtctgatgtgcgattcctgattcctgtacttactggactgaaa
aaacaagagattatcgctgtgctgcccaaactgatcaaacagtcgcccagcgtggtcaaa
gaagtgtttaacaggctgctaggatgcttccatagtgattctaaagtatccgccaccagc
cccctcagtccgtccgagctcctggttgctcttcatcagatcgaggctaaaagtgacatg
aagtctgttatgaaagccagcagcttgtgtttcgcggagaagaccatttacactcaagag
gtgctagcagtggttctgcatcagttgatggaaatgaatcctctccctaccctatttatg
agaacggtgatccagtctctcagtatttgtcctcggttggtcggttttgtcatgaatatt
ctcgcaaaacttatcacaaaacaggtatggaaacagccaaaagtgtggcagggatttgtg
aagtgttgtcagatgaccaagcctcagtccttctcggtccttcttcaactcccttcccga
cagttagagagtgtatttgagatttgcccagagctcaaagaaaatctggttttgcatgtt
cagtcgttcactcctcaccagcgagctcacataccaagatccctgttgcaaatcttagaa
aaggacggaaagaaagacgaaaagaaaccgaaaccagaaaaaccagataaggaacaaatc
gaccctgaggaggaggaggaggaagaggaagaagaagactcgacgaagggcgacaaatct
ccgaagtggacacgatcacacacgagggaggcgctgaaagataaacggaaatcacgaaga
tcgcgctctcgctccaggtcaccgcggaagaaacgggagaaaagtgctggcgaagaaagt
gcaagcgaaggggaaatcaactaa

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