Pocillopora damicornis (lace coral): 113678751
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Entry
113678751 CDS
T05773
Name
(RefSeq) symplekin-like
KO
K06100
symplekin
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113678751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113678751
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113678751
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113678751
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113678751
U7-dependent histone pre-mRNA processing factors
113678751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
113678751
NCBI-ProteinID:
XP_027051464
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MAASSRARVRLSEASQAFLNDDADARASGEYSAEDSTSEKVIDLLNQAQLEKENKLNCLK
QVQEFIVNKDPTLLDNFLDEILVFQQDRSADVRKFVVGFIEEACKKDIELLSKVLNNLGF
MLNDDNVAVQKRVMLCFTQLYKYALQYICKQKAISEELERMWELLIQIKEQIIDMLESDN
DGIRTHAIKFMEMLVLVQSLKTQDSESLKKGEADISLEIVPRNHPLIKMTELREEGGSTL
ESLLTLIASHTISSVNLMASLGSLSAIARQRPAFMSIVVQAFESLHANLPTSLSKSQVSS
VRKNLKLHLMSLMKHPSSIEFLPQITTLLTDLGASQAELQRNMPKASAEKRRSEPEAATS
KKPKLDTEEIETMSASDAVDMTAQDIIPRLNKDTVTDLVLVSMLALPDSIPSHFHDTYTP
IAAAGGQAQVVHLARLLATQMNAAKIGKGYERMEALRKAQNDPRMKEESMSIPVIGGPGF
NGPGAEDDPVFMFGVPKPEEDSALQRMLGGHLEATKEKRPMDIKKTPFVPKEPAVPQLRM
RKIKPFKLSDVTRELNPDERQSMMTNAVSRILASEGSAARSGVTQERINLIVGLVTQLGG
DLKMVLQEFIQEEIRSRYDLLMSWLYQEYASSEIEGIDEDSDLRQSYSDCLLNLMDGLYA
KLDPKDKLFTRILLDIPALTDGAVMAVRMYCEDLNLNLLVSTFLVHPRLAKVYTASSQII
KRIILRHLEHPVRAIGMASPELLQLVENCPTGAETLIARILNIITDKAVPTDELVKRVKE
LYHKRVSDVRFLIPVLTGLKKQEIIAVLPKLIKQSPSVVKEVFNRLLGCFHSDSKVSATS
PLSPSELLVALHQIEAKSDMKSVMKASSLCFAEKTIYTQEVLAVVLHQLMEMNPLPTLFM
RTVIQSLSICPRLVGFVMNILAKLITKQVWKQPKVWQGFVKCCQMTKPQSFSVLLQLPSR
QLESVFEICPELKENLVLHVQSFTPHQRAHIPRSLLQILEKDGKKDEKKPKPEKPDKEQI
DPEEEEEEEEEEDSTKGDKSPKWTRSHTREALKDKRKSRRSRSRSRSPRKKREKSAGEES
ASEGEIN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaagtagtcgagctcgtgttcgactttcggaagcttcacaagcctttctaaat
gacgatgcagacgcccgagcttctggagaatattctgctgaagattctacatcagaaaag
gtaattgatttgcttaatcaagctcagctggagaaggaaaacaaactgaattgtctgaaa
caggttcaagagttcattgtgaacaaagacccaacccttcttgataattttttggatgaa
atcctggttttccagcaagatcgatcagcagatgtacgtaaatttgtggttggattcatt
gaggaggcatgcaaaaaagacattgagctgttaagcaaagtgctcaacaatctgggtttt
atgttgaatgatgataatgttgctgttcagaagcgagtcatgctgtgttttacacagctg
tacaagtatgctttacagtacatctgcaagcaaaaagcaatatctgaagagctcgaacgc
atgtgggagcttctcatccagataaaggaacagattattgatatgctggaatctgacaat
gatggaataagaactcatgctataaagtttatggagatgcttgttcttgtccagtcactt
aaaactcaggattctgagtcactgaagaaaggtgaggctgacatctcattggagatagtt
cccaggaatcatcctctaatcaagatgacagaactaagggaggaaggaggatcaacactg
gagtctctactcaccctcattgcatctcacaccatctccagtgttaacctcatggcttcc
cttggatccctgtcagcaattgctcgtcaaaggcctgcgttcatgtccattgtcgttcag
gcatttgagtctctccatgctaatcttccaacctctctgagtaaatcgcaagtcagcagt
gttaggaaaaatctgaagcttcatctgatgagtttgatgaaacatccatcttcaattgag
ttccttccccagattaccacacttttaacagatcttggggcttctcaggctgagcttcaa
aggaatatgccaaaagccagtgccgagaaaagaaggtctgaaccagaagcggcgacttca
aagaagccgaagcttgatactgaagagatagagacgatgtctgcatcagatgcggtagac
atgacagcacaggatattatccccagactcaacaaagacactgtaacagaccttgtactg
gtcagcatgttggctcttcctgacagcattccttcccacttccacgacacctacaccccc
atcgccgccgcaggtggacaggcgcaggttgttcatcttgctcgactgttagccacccag
atgaatgctgccaagattggaaaaggctatgagagaatggaagctttgcgaaaggctcag
aatgacccacgaatgaaggaggagagtatgtcgatccccgtgattggtggaccaggcttt
aacgggcctggcgctgaggacgatcctgtgtttatgtttggtgtacctaaacccgaggag
gattcagcattgcaaaggatgttaggtggacaccttgaggcaactaaagaaaagagaccg
atggatataaaaaagacgccatttgtacctaaagaacctgctgtccctcagctgcgcatg
aggaagatcaagccattcaagttatctgatgtgacaagggaattgaatccggacgaacga
caaagtatgatgacgaacgctgtcagtagaatacttgcctccgaaggtagtgctgcaagg
agcggagttacacaggaacgcatcaatctcattgtcggacttgttacacaattgggaggg
gatcttaaaatggttctccaagaatttattcaggaggagatccgatcccgatatgatctg
ttgatgtcctggctatatcaagaatacgcatcatcagaaattgaaggaatagatgaggat
tctgacctgcgccaatcgtacagtgattgtcttctaaatcttatggacggactttacgct
aaactggatcctaaggataaattgtttactcgtattcttcttgacatcccggcattaacg
gacggagcagtaatggcagtgagaatgtattgtgaagacttgaaccttaacttacttgtt
tctacttttcttgtccatccaaggttggccaaagtatacacagcttcctcgcaaatcata
aaaagaatcattctcagacaccttgaacatcctgttcgcgcaattggcatggcttctcct
gagctcttgcagttggtggagaactgtcctacaggcgctgaaactcttattgccagaatc
ttgaacattattaccgacaaagcggtgcccacggatgaactggtgaagcgagtcaaagag
ctttaccacaagcgtgtgtctgatgtgcgattcctgattcctgtacttactggactgaaa
aaacaagagattatcgctgtgctgcccaaactgatcaaacagtcgcccagcgtggtcaaa
gaagtgtttaacaggctgctaggatgcttccatagtgattctaaagtatccgccaccagc
cccctcagtccgtccgagctcctggttgctcttcatcagatcgaggctaaaagtgacatg
aagtctgttatgaaagccagcagcttgtgtttcgcggagaagaccatttacactcaagag
gtgctagcagtggttctgcatcagttgatggaaatgaatcctctccctaccctatttatg
agaacggtgatccagtctctcagtatttgtcctcggttggtcggttttgtcatgaatatt
ctcgcaaaacttatcacaaaacaggtatggaaacagccaaaagtgtggcagggatttgtg
aagtgttgtcagatgaccaagcctcagtccttctcggtccttcttcaactcccttcccga
cagttagagagtgtatttgagatttgcccagagctcaaagaaaatctggttttgcatgtt
cagtcgttcactcctcaccagcgagctcacataccaagatccctgttgcaaatcttagaa
aaggacggaaagaaagacgaaaagaaaccgaaaccagaaaaaccagataaggaacaaatc
gaccctgaggaggaggaggaggaagaggaagaagaagactcgacgaagggcgacaaatct
ccgaagtggacacgatcacacacgagggaggcgctgaaagataaacggaaatcacgaaga
tcgcgctctcgctccaggtcaccgcggaagaaacgggagaaaagtgctggcgaagaaagt
gcaagcgaaggggaaatcaactaa
DBGET
integrated database retrieval system