Pocillopora damicornis (lace coral): 113680136
Help
Entry
113680136 CDS
T05773
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113680136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113680136
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113680136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
113680136
NCBI-ProteinID:
XP_027052934
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MADVEDDEKFLYGGGDAQEKDQTLSTEIKQEPKEEEEITENGQVKDEDDAKEAGELSNED
DEEDDDDDDDDDDDDVQVTIGEINTSAAPYGAPYAAPVNWNFKSGSGSAAVKDTKDNKHI
DVDAVGTVNGVSVHEFDLDSVDDKPWRKPGADITDYFNYGFTEDTWKQYCEKQRRMRMEL
QMPKKIFMHPPATVDPTLLPDGRPRKAGPPPERKLEGSIDVIGGEGSRVESRRRREDDVM
MPMMEEGMNPDVAARQGMMNKRHFPPGPPGGPHGMPPVSGAPPFIPPHPDPSMGPPNSGA
PHGIPMHMPPGGPIPPGMPPPFRPMGPDGRHHPEGAPPGMPPPGMPPMPGMAGPPPHGFP
PEMGLPPDGMPPPFDPGFPGRPGAMSMRGRGRGRMPVGGPPGVPPGMPPPGEFPQGIDER
GPRPFEEGAAFFPGGDPTQAFHPMMGHPPGMPWDAGMGRGFPPGFREGFPGAMGRQGSES
PGDDDSEFGSSDEDRKRDRDSHRRRDRDRDRSREHRERNRDRDRSPRKERDRDRDRDRRD
RERRHRDRDKGDRERREERSSRKDKDREKSKEQREKKRHSKTTGSETSGGPEEGELVSSK
KKSRRTREAKETKSENSEPREEGQRTPTP
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttgaagatgatgagaagtttttgtatggaggtggtgatgcacaggaaaag
gaccaaacattgagcactgaaattaaacaagaaccaaaagaagaagaagaaattacagaa
aatggacaagtcaaagatgaagatgatgccaaggaagctggagagctaagcaatgaagat
gatgaggaggatgatgatgatgatgatgatgacgatgatgatgatgtccaggtcactatt
ggggaaataaatacgtcagcagcaccatatggagctccatatgcagcacctgtaaactgg
aatttcaagtcaggaagtggatctgctgcagtaaaggatacaaaagacaataaacacatt
gatgtggatgcagttggtacagtcaatggtgtgtctgtgcatgaattcgatttggactca
gttgatgacaaaccttggagaaagcctggtgctgacatcactgattacttcaactatggc
ttcacggaagacacatggaaacaatactgtgaaaagcagagaagaatgagaatggaatta
caaatgccgaagaaaatatttatgcacccaccagccacagtggacccaaccttgctgcct
gatgggagacccagaaaggcaggcccaccccctgagagaaaactggaaggaagcattgat
gttatcggcggagagggctccagagtggaaagtcgccggagacgtgaagatgacgtcatg
atgccgatgatggaggaaggtatgaacccggatgtggcggctcgccaagggatgatgaac
aaaagacattttcctccaggtccaccaggaggtccccatgggatgccaccggtgtcggga
gccccaccattcattccccctcacccagacccctcaatgggccctccaaattcaggagca
ccacatggtatacctatgcatatgccacctggtggtcccattccacccggaatgccccct
cccttcagacccatgggtccagatggacgacaccaccccgagggggcacctccgggtatg
ccgcccccgggtatgccccctatgcctggcatggcaggtccgccaccccacggatttccg
cctgagatgggattacctccggatggaatgccaccgccatttgacccagggtttccaggt
cgcccgggtgcaatgagcatgcgtggtagaggtcgtgggcgaatgccggtaggagggccc
ccaggggttccgcctggaatgcctccacccggggaatttccgcaaggaatagacgaaaga
ggaccaagaccgtttgaagaaggagcggcgtttttcccaggaggagatccaacccaagct
tttcacccaatgatgggacatcctcccggcatgccgtgggacgctggcatgggtcgcggg
tttccccctggattccgcgagggattcccgggtgccatgggcaggcaaggcagcgagagt
ccgggagacgacgatagcgagtttggcagtagtgatgaagataggaaacgcgatcgtgat
tcacatagacgtcgagacagagatagggacagaagccgtgaacacagagaaagaaatcgt
gaccgagatcgttctccacgtaaagagcgtgatcgtgatcgtgaccgagataggcgtgat
cgagaaagaagacaccgtgaccgtgacaaaggagacagagaaagacgtgaggaacgttca
tcgcgaaaagataaagacagagaaaagtcaaaagaacaacgagaaaaaaaaagacatagt
aaaacgacagggtctgaaacttccggcggcccggaagagggagaactggtgtcgagcaag
aagaagagtagaagaacccgggaggcgaaagaaactaagagcgaaaattctgagccgcga
gaagaaggtcagcggacaccaacaccatga
DBGET
integrated database retrieval system
