Pocillopora damicornis (lace coral): 113682036
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Entry
113682036 CDS
T05773
Name
(RefSeq) regulator of nonsense transcripts 3B-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
pdam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113682036
03015 mRNA surveillance pathway
113682036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113682036
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113682036
mRNA cycle factors
P-body specific factors
113682036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
STI1-HOP_DP
Motif
Other DBs
NCBI-GeneID:
113682036
NCBI-ProteinID:
XP_027054987
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MGKSEVEKAPSAPKTKREKIYSPTKVIIRRLPPSFTEEQLKEELGEFPEHDFFYFVGSNM
SFGPVSFSRAYINFKNREDIIKFRDQFDGYCFVDSRGVEYPAVVEYAPYQAVPKKKVKKD
PKIGTILEDPDYKVFLESLNKDEEPPPSVEAHLEEIEAKKSSSSAAKKSTPLLEYLKMKR
SPRGRPLSSRNISDKKRRPDREELPKSPKKSSNLSSSKDSGGKSGSHPPKEEKPKDDRKD
ANAKEGTRKKDEQDRKGSKDTKASLSSKEKSDSKSPAKGKEEKGRPESGRFGRRSDSRRS
DERRPEDRRNSNRRDRRDTGDSSGSDRVRDDRSRKESGSDGSGRRDRRPESRRDSRPSRE
PEDKPKGREPLPKASDADKGGKSGGEKEKEQMKTTSKANETEKNRKEEDSSVVGDAKPSR
EEEKGAAKDEKVRSEEETSRQRRLRNKDRPDRAIYQPRSASRGAGSKSDASKGTESSEKE
RGKDSRTKEKNREAERESRKNRDDKPRDRYRDDRRERDRDRDRDRRSDRDRDRERDRPRE
KARERDQDQTEFTKEERDERKKAEANESVSDETKTTTCE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaagtgaagtcgaaaaagcacctagtgcacccaaaaccaagagagaaaaaata
tattcccctactaaggttataatccgccgtctccctccatcgtttaccgaagagcaattg
aaagaagaacttggagagtttcctgagcatgactttttctattttgttggcagtaacatg
agctttggtcctgtttctttttcaagggcatacatcaactttaaaaatagagaggatata
atcaagtttagagatcaatttgatgggtactgctttgtggacagcagaggtgtagaatat
cctgctgttgtggaatatgctccttaccaagctgtacctaaaaagaaagtcaaaaaagat
ccaaagattggaactattttggaagatcctgactacaaggtttttctggaatcactgaac
aaagatgaggagcctcccccaagtgttgaggctcatttggaggagattgaagctaagaaa
tcttcatccagtgcagcaaaaaagagtactccattactggagtacttgaagatgaagaga
agtcctcgtggaaggcctttgtcatctcggaatatttctgacaagaagagaaggcccgac
cgagaggaactaccgaagtcgccgaagaaatcgtcgaatttgtcttccagcaaagattct
ggtggtaaaagtggcagccatccgccaaaggaggaaaagcctaaagacgacaggaaagat
gcaaatgccaaagaaggaactcgaaaaaaagatgagcaggatagaaaaggcagcaaagac
acaaaggcatcattgtcttccaaagagaagtctgattcaaaatctcctgcgaaaggaaaa
gaggaaaagggtcgacctgaatcaggaagattcggaaggaggtccgacagccgacgctcc
gacgaaagacgaccagaagacagacgaaatagcaatcgtagagaccgaagagatactggt
gatagttccggaagcgatcgagtacgtgacgatcgctcccgaaaagaaagcgggagtgac
ggaagcgggcgacgcgatcgaagaccagagagtcgacgggattcgcgaccatctcgagaa
cccgaagataagccgaaaggaagagagcccttacctaaagcaagcgatgctgataagggc
gggaaaagtggtggggagaaagagaaggaacagatgaaaaccacatcaaaggcaaatgaa
acggagaaaaacagaaaggaggaagacagctcagtagttggtgatgcaaaaccctccaga
gaagaagagaagggagcggccaaagacgagaaagtacgaagcgaagaggagacgagtagg
caaagacgattacgaaacaaggatcgtcctgatcgagccatttatcagccaagatcagct
tcacgaggagcaggctctaaaagtgacgcttctaaaggaactgaatcatcagaaaaagaa
agaggcaaggactccaggaccaaggagaagaatcgtgaagcagaacgtgaaagtagaaag
aaccgtgatgataaaccacgcgatcgatatcgtgacgatcgaagagagcgtgacagagac
cgtgacagagatcgacgaagcgatcgtgatagagatcgtgaacgtgatcgtccgcgagaa
aaggcgcgtgagcgtgaccaggaccaaactgaattcacgaaagaagaacgagacgagcgg
aaaaaagctgaagccaacgaaagcgtctccgacgaaactaagacaacaacttgtgaatga
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