Pocillopora damicornis (lace coral): 113682748
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Entry
113682748 CDS
T05773
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113682748
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113682748
Complex C
U4/U6.U5 tri-SnRNP related factors
113682748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
113682748
NCBI-ProteinID:
XP_027055725
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAEVERSRIRSVVQTVKHSNSPSTRITRSRSRSRSPVEGRRKANEDKENIRRSDDDDEDE
KEYHGRLQQSDSDNDTRSQRRKERKKYDSERYKERERHDNRRRRSDDDDGDNGGWRADRR
KRQERRSDRRRQDTPSDDERYDNRNPAEKKGKYDERREQPEEEGSTEKTEEPEKVVRKKA
NTNNPLLTRTGGAYIPPARLKMMQEGIEDKSSEAYQRISWEALKKSINGLVNKVNTSNIG
NIVRELFQENIVRGRGVLCQSIIRAQAASPTFTHVYAALVAILNTKFPKNGELLLRRLVL
QFRRAYRRNDKAVCLSSTRFIAHLVNQQVAHEILALEILTLLLHKPTDDSVEVAIGFLKE
VGMKLTEVSSRGVHAVFERLRNILHNAEIDKRVQYMIEVMFAVRKDGFKDHVAVPDELDL
VEEEDQITHLLRLEEASNPEDILNVFKFDPNFLENEEKYKEIRRDILGEGDSDDSSDGDD
DDDDDDDDDDEGEGQDDKKMEIIDHTETNLVALRRTIYLTIQSSLDYEECAHKLLKMQIK
PEQMVSYXRLGEMLEAFELNNSPLTSFSLFHVCSRVFIKILFQELAEYLGLPKLNERLKD
PFLAQYFEGIFPRDNPRNTRFSINFFTSIGLGGITDELREHLKNAPKMIMSQQRPGESDS
DSDSSDDSDSEDSSSSEDSSEESPESSEDSSDDDRKKKRHKKKHSSRKKKKESNSKKKES
DSKRHKKRR
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggttgaaaggtcaagaatacgcagcgtagttcagactgtaaagcattccaat
tctccaagcacgaggataacgagatcgcggtctcgatcgagatcaccggttgaaggaaga
aggaaagctaacgaggataaagagaacatacgcaggagtgatgatgatgatgaggatgaa
aaggaataccacggaagactgcaacaaagtgatagtgacaatgacacaagatctcagcgg
aggaaagaaagaaagaaatatgactcagaacgatataaggagcgagaaagacatgacaat
cgaagacgtcgcagtgatgatgatgatggtgataatggtggctggcgtgcggatcggcga
aaaaggcaagagcgtagatctgacagaagaaggcaagatacaccttcagatgatgagagg
tatgacaatcgcaatccagccgagaaaaaaggtaaatatgatgagagaagagaacagcca
gaagaagaaggatcaacagagaagactgaagagccagaaaaggttgtacgaaagaaggca
aatacaaataatccactcctgacaagaacagggggagcttacattccaccagcaagactc
aaaatgatgcaggaaggcattgaagataagagcagtgaagcctatcagcgtatcagctgg
gaagctctgaagaaaagtatcaatggtcttgttaacaaggttaacacatcaaacattggc
aacattgtacgagagctttttcaagaaaacattgtgagaggaaggggtgtcctttgtcaa
tcaattatcagagcacaggcagcgtcacccacgttcactcatgtttatgctgctcttgta
gccatcttgaacacaaagtttcctaaaaatggtgaacttcttttgcgtcggttggtgctg
cagtttaggagagcttacagaagaaatgacaaggctgtgtgcttatcatccacaaggttc
atagctcatttggtcaaccaacaagtggcccatgagattttagctttggagatcctgaca
ttattgttacacaaacccacagatgatagtgttgaagttgcaattgggttcctgaaagaa
gttggaatgaaattaactgaagtatcttccaggggtgttcatgctgtgtttgagaggctg
cggaacattcttcacaatgcagagattgacaagcgagttcagtacatgattgaagtgatg
tttgctgtaagaaaggatggatttaaggatcatgttgcagtacctgatgaacttgacctt
gttgaagaggaagatcaaatcactcatttattgcggctggaggaagcatcaaatccagag
gacattttaaatgtcttcaagtttgatccaaatttcttggaaaatgaagagaaatacaaa
gaaatcagaagagatattcttggagaaggagactcagatgattcttctgatggagatgat
gatgatgacgatgatgatgacgacgatgatgaaggcgagggccaagatgacaaaaaaatg
gagattattgatcacactgaaacaaatcttgtagctttgagaagaacgatatacctcacc
attcagtccagtttggattacgaggaatgtgcccacaaactgctgaagatgcaaattaaa
ccagaacaaatggtaagttattagaggcttggagaaatgctggaagcttttgagctgaat
aattctccactcacttcgttttctttattccatgtttgcagccgtgtttttatcaagatt
ctgttccaagagttagccgaatacttgggccttccaaaactcaacgagcgcctgaaagat
ccgtttctggcgcaatattttgaaggaatctttccccgcgacaatccacgcaacactcgg
ttttcaatcaatttcttcacctcaattggtcttggtggtatcacagacgaactgagagag
catttgaaaaacgctcctaaaatgatcatgtcccagcagagacctggtgagagtgatagc
gattcggattcttctgacgacagcgacagtgaagatagttcaagttcggaagattcttcc
gaagaatctccggagtcttccgaagactcctcggacgatgatcgtaagaagaaaaggcac
aagaagaagcattcgtctcggaagaagaagaaagaatcgaattccaagaagaaagaatcg
gattccaagagacacaagaaaaggcgatga
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