Pocillopora damicornis (lace coral): 113685817
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Entry
113685817 CDS
T05773
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113685817
Enzymes [BR:
pdam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
113685817
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113685817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
PCMT
FtsJ
Nop14
Motif
Other DBs
NCBI-GeneID:
113685817
NCBI-ProteinID:
XP_027059183
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MGRRKLSSKGSTQENPPKKGPGRKAKKQPAPKLPKQLDGSNVQNSRKRKLKHQSGSVSGK
SKSEVKSSKKARMKRSLPDAEETQEAEESSGEEFVKLNIKSNPFSDSNANWLKLAKKDGE
GSDDQDDFMQDDDFISDDYSTSKQNDSNTDDDENVNEEDDDDDDGDDKDDDDEDEDDEEM
LPIERKAKKLDEKKAKDKALAEEELMTNITETEVFVLPSGQEIEKEANEHTDLALINQRI
RDNIQALNNFNTTREPGRSRQEYVELLLSDLCKYYSYGKFLMEKFMDLFPINELVEFLEA
NEVQRPITIRTNTLKSRRRDLAQALINRGVNLDPIGKWSKVGLVVYDSSVPIGATPEYLA
GHYMLQGASSMLPVMALAPQEKERILDMCAAPGGKTTYIASLLKNTGLVVANDAKKERTK
ALVANIHRLGISNTLVCHYDGRAFPKVMAGFDRVLLDAPCSGTGVISKDQSVKINKTEKD
IHRCSHIQKELILSAIDATDAKSSSGGYIVYSTCSVLVEENEAVIDYALSKRHVKLVSTG
LDFGQEGFSKFRGKHFHPSLKLSKRFFPHTHNMDGFYVAKLKKYSNKISPQGEISSKVGN
KKD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagaaaactttcgagtaagggatctactcaagaaaacccaccgaaaaagggt
cctgggaggaaggcaaagaagcaaccagcgccaaagttaccgaaacagttagatgggagc
aatgttcagaattcgaggaaaagaaagttgaaacatcagagtggaagtgtgtcagggaaa
agcaagtctgaggtgaagagctctaagaaggcaagaatgaaacgatctttacctgatgct
gaagagacacaggaagctgaagaatcaagtggtgaagaatttgttaagttaaatatcaag
tcaaatccttttagtgatagcaatgccaactggctaaaacttgctaagaaggatggggaa
ggtagtgatgaccaggatgatttcatgcaagatgatgattttataagtgatgattacagc
actagtaagcaaaatgacagtaatactgatgatgatgaaaatgttaatgaagaggatgat
gatgatgatgatggtgatgacaaggatgatgatgatgaagatgaagatgatgaggagatg
ttacccatagagaggaaagctaaaaagctcgatgagaaaaaagccaaagacaaggcctta
gctgaagaagagcttatgactaacatcactgaaactgaagtgtttgtgctgccaagtgga
caggaaatagagaaagaagcaaatgaacatacagatttagctttgatcaatcaaagaatc
agggataacatacaagcactcaacaactttaatacaacacgtgaacctggcaggtcacga
caggaatatgtggaactacttcttagtgacctttgtaaatactatagttatggaaaattt
ctgatggagaaatttatggaccttttccccataaatgagttggtagaattccttgaggca
aatgaagttcagaggcccatcactattagaacaaatacattgaagtcgagaagaagagat
cttgcacaggcccttataaaccgtggggtaaatttagacccaattggcaaatggtctaag
gttggacttgttgtctatgactcttctgtaccaattggagccaccccagaatatctagca
ggacactacatgttgcaaggggcatcatcaatgctcccagttatggccttggctcctcag
gagaaagaacggatattagacatgtgtgcagctcctggtggcaaaactacatacatagca
tcactcctaaagaacactggactggtggttgcaaatgatgctaaaaaggaaagaacaaaa
gctttagttgctaatattcatagattaggaataagtaacaccttggtttgtcattatgat
ggtcgagcatttccaaaggtaatggcaggttttgaccgtgttcttcttgatgccccatgc
agtggaacaggagtcatatcaaaggatcagtctgttaaaatcaataagactgagaaagat
attcatcggtgttctcatattcagaaagaactcattctgtctgctattgatgctacagat
gctaagtcatcaagtggtggatatattgtttactccacctgttctgttttggtagaagaa
aatgaggctgtgattgattatgctctcagcaaaagacacgtaaaactggtatccactggg
ttggactttggccaagaaggattttcaaagttcaggggaaaacatttccatccttcctta
aaattgagcaagagatttttccctcacactcacaacatggatggattttatgttgccaag
ttgaaaaaatattccaacaaaatttctcctcaaggagaaatttccagcaaagtagggaat
aagaaagattaa
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