Pocillopora damicornis (lace coral): 113685881
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Entry
113685881 CDS
T05773
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113685881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113685881
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113685881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
TACC_C
ZapB
TMF_TATA_bd
HALZ
Motif
Other DBs
NCBI-GeneID:
113685881
NCBI-ProteinID:
XP_027059259
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MSEANESALGDLNKASDEFKRSTEGKLKTAEQEIAQYKSQMATLQASNQDLSAARAKLTR
EAESQTKSLRDVLSKVRGELDEALKKAQTSTAAEMTAKEELKEQAMLAAEAQDKYERELV
LHANDVQALSTAKEQLQEQSSKFKEVEDRALAAEQKLEEYAKSWEDQKKAKASEAKKLEA
RCADLVNQNSMLHGQLEKLSSQLAGSKQMALNIPVTPQEGVAADGGEETNKSIEELWEII
RFVRREKEISETKCELSQSESIRYQQRCEYLEAQVADLQKNMTEERTQSEINTQTAAQHA
EIMEKVERLNEVIESNKVLTNEKETAEKTVKELAEKIKGLEGEMKPLKDGVQSLTSQKDA
LLAEKTALKNEIVRWTAKIKQLTEQYKDVDVDEYKRIKEEKKQFQQQISSLKADNQRIKT
QTESLKSDLSKTQGELAGLRAMSQKSTDQLGSLKEEHQKELSKMQQEVESLKASVEAKTK
EVNEKNATLLQVKRIARRYKTQVDEQTKEMEELKKKTNEAGQSTANGTAEAASSGVTAAE
NVDVAAQENKIKELTEQVKNFDEEVKKLKKIARHYKTQHEEQTKEMEELKKKLEDSGQAT
AEGVSPGDASSGTADLASEENKVKELTEQLKTAMDEVKKLKELDEQNKTSLKEKEDKNRK
VLIQARERLQQLSATKDRLSAENEEFKKKHKSLSDEKEAVTQQLTEFEMRMKVLNSQCEG
KVTRLEKELQDYKTANDTKEKAVEEMKKQIEEYRQKEKVDVEKLQQKLQQYQALIQKQQM
KIKSFAVNTSSSISRPSSGEVTGAETTTTQAETPSSITVTSAPPISLVPPTATIKPTTTP
TTIKRSGPKASVRPIAVAPTQSTPTPTATVLPTVTSTPSEAVSVAGTIRVTGTAISTASS
VSTSVPTTVSVRPITSTVEVQQQQPSQGESEVSSTEVTASEQLQPTPSTAVVSGKRQRDE
SQVTDRSATEVVEGTSTEDEPLPKKIRTVELQVEDEVGTSQEAFEDTAADGTGDDQLEEE
EEGKEEFDFDGYDGEEGEEEEDQETQDSGRQEVIQATTIEPEVVLIESDEDEDVEEENLD
EGEEEEDDEDYVEQDEDYAEGEVGEMEEDDEGEDEEAEYMEGEVVDEDDEDMDENGEDDP
KQEVVEVIDDDEDDMDENVREAAAIEERQMGEEDAGEIVGEEDVAEEIQDQNEIEQAETS
DANVEREISTTEQLTTGAAVDSQLLESAQRSVTPTTSVTITQRLLSARSHLPPFSFPQGQ
PAPGPFNEEEDCMVPSTPTLYVPKRTDGFAEAISSPQINRSSFSFAAPGESSMSSVGVLE
LGMSEEGLRVDDTQVDLMGGSDEASHERPSFVVPTGLPEAVEASTASQSNQRIPSTSSDT
RQLSLESLESETEAGSIATVPAIMVTPVTEASEESSEQNVPVSQAHPEVLDTEVVELLED
VEALKEGEEAEEQEAVEKGSELEMKESQEFASEDISQPSISGEPSRTSSQSASTTGGSAA
KARQDLSRGRGSVVQLRRPATTSTWSTTRGGTQAQRGTSASGRVRRLRRDPVRGPGAHRG
RGTQMPRGRQGGTPRGGGQA
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagccaatgaatcagcccttggtgacttgaacaaggcaagtgatgaatttaaa
cgatctactgagggtaaactcaagacagcagagcaagaaattgcccagtacaaatctcag
atggccactcttcaagcctcaaaccaagatctcagtgcagcaagagccaaattaaccaga
gaagcagagtcacaaaccaagagtttacgagacgtgttgagtaaggttaggggggagctg
gatgaagctttaaagaaggcgcagacatctactgctgctgagatgacggccaaagaggaa
ctgaaggaacaggctatgttggctgcagaggctcaagataagtatgagagagaacttgtc
ctccatgctaatgatgttcaagctttgtccacagctaaagaacagcttcaagaacagagt
agtaaatttaaagaagtagaggaccgtgcccttgcagcagagcagaaattagaggaatat
gccaagtcttgggaggatcagaaaaaggcaaaagcttcagaagccaaaaaactagaggct
cgctgtgctgaccttgtgaatcagaactctatgcttcatggccagctagaaaaactcagt
tcccaacttgctggtagtaaacagatggcgttgaacatccctgtgacaccccaagagggt
gtggcagcagacggaggggaagagactaacaaaagtattgaagaactctgggaaatcatc
agatttgttcgtcgggaaaaggagatctctgagaccaagtgtgaactatctcagtctgaa
agtattcgctaccagcaacgctgtgaatacttagaggcacaagtggcagatctgcagaag
aacatgactgaggaaagaacacagtcagagatcaacactcagactgcagctcagcatgca
gagatcatggagaaagtggagcgactgaatgaagttattgagagcaataaagtactgaca
aatgaaaaagagacagctgaaaagacagtaaaagagcttgcagaaaagatcaaaggactg
gagggggagatgaaacctctgaaggatggtgtgcagtcacttacatcacagaaagatgct
ttgttggccgagaaaacagctcttaaaaatgagattgtgcgctggacagcaaagatcaaa
cagttgacagaacagtacaaggatgttgatgttgatgagtataagagaattaaagaggaa
aagaaacagtttcagcagcagatatccagcctgaaagctgataatcaaagaataaaaact
cagacagaatccttgaaatctgacttgtcaaaaacacaaggagagttagcaggattaagg
gcaatgtcacaaaaatcaactgatcagctgggaagtttgaaagaagaacatcagaaagaa
ctatctaaaatgcagcaggaagtagaatccctaaaggcatctgtagaagccaagacaaaa
gaagtcaatgaaaagaatgcaaccctgctgcaggtgaaacgaatagctcgtcgttacaag
acccaagttgatgagcaaacaaaggagatggaagagctcaagaaaaagaccaatgaggct
gggcagtccacagctaacggaacagcagaagctgcatcttctggggtgacagctgcagaa
aatgttgatgttgctgcacaggagaacaagatcaaagagctaacagaacaggtaaagaac
tttgatgaggaagtaaaaaaacttaaaaagatagctcgtcattacaagactcaacatgag
gaacaaactaaagaaatggaggaactgaaaaagaaattggaagactctgggcaggccaca
gcagaaggagtatcaccaggtgatgcatctagtggtactgctgatctggcatcagaagag
aacaaggtgaaagagttaacagaacagttgaagactgcaatggatgaggtcaaaaagctg
aaagagttggatgagcagaataagacatccctgaaggagaaagaggataagaacaggaaa
gtgctaatacaagccagagaaaggctgcagcagctttcagctactaaggacagactgagt
gcagaaaatgaagaatttaagaagaaacacaagtcactgagtgatgagaaggaggcagta
acccagcaattgactgaatttgagatgagaatgaaagtcttgaactcacaatgtgaaggg
aaagtaacaaggttggagaaagagctacaagattataaaacagctaatgacacaaaggag
aaggcagttgaagaaatgaagaaacaaatagaggagtacaggcagaaagaaaaagttgat
gtggaaaaacttcaacagaagctgcaacaatatcaagcactgatacagaaacagcagatg
aaaataaagtcttttgcagtcaatacatcaagttccatttcaagaccatcctcaggagaa
gttactggagcagagactacaacaactcaagcagaaacaccgtcaagtatcactgttaca
tcagcaccaccaatatctctagtgccaccaacagcaacaataaaaccaaccaccaccccc
acaacaattaaacgctctggacctaaagctagtgtgcggcctatagcagttgcaccaaca
caaagcacacccacccccactgcaactgtcttaccaacagtcacttccaccccctcagag
gctgtaagtgttgctggaaccataagggtgacaggaacggcaatttctacagcaagcagt
gtgtcaacctctgtaccaaccacagtgtccgttcgtccaatcaccagtactgtagaagtg
cagcagcaacagccttctcaaggagagtctgaggtgtcatccactgaggtgacagccagt
gaacagctgcagcctactccatctacagctgtggtatcaggaaagagacagagagatgaa
tctcaagttactgacagaagtgcaactgaagtcgtggaaggtacaagtacagaagatgaa
cctctgccgaagaaaatcaggactgtagagcttcaagtggaagatgaagttggaacatca
caagaagcatttgaagacacagctgcagatggcacaggtgatgatcaacttgaagaagag
gaagaaggaaaggaagagtttgatttcgatggttatgatggggaagagggtgaggaggaa
gaagaccaggagacacaagattctggaagacaagaggtgattcaagctacaaccatagaa
ccagaggtagttttgattgaaagtgatgaagatgaagatgttgaggaagagaaccttgat
gaaggagaagaggaggaggatgatgaagattatgttgagcaggacgaggattatgctgag
ggagaggtgggtgagatggaggaagatgatgaaggtgaagatgaagaagcagagtacatg
gaaggagaggttgttgatgaagatgatgaagatatggacgaaaatggagaggatgatcca
aagcaagaggtggtggaagtgatcgatgatgatgaagatgacatggatgaaaatgttcgg
gaagcagcagcaattgaagaaaggcagatgggagaagaggatgctggagagatagtagga
gaagaagatgttgctgaagaaatacaggatcagaatgagattgaacaagctgagacttct
gacgcaaatgtagaaagagagatttccacaacagagcagcttacaacaggagctgctgtt
gatagtcagttattggaaagcgcacagagatctgttacaccaacaacatcagtcacaatt
acacaacgtctcctgtctgctaggtcccatttgccaccgttttcatttcctcagggccaa
ccagctccaggtccatttaacgaagaagaagactgtatggtgcccagcacccctacactg
tatgtaccaaagagaactgatggttttgctgaggctataagctctccacaaataaatcgt
tcatcattctcatttgctgcacctggagagagctctatgtcatctgtaggtgttttggaa
cttggcatgtcagaagaagggctccgtgtagatgacacacaagtggaccttatggggggc
tcagatgaagcttctcatgagagaccttcctttgtagtgcctacaggcttaccagaagca
gtggaagcaagtacagccagccagtccaaccaacgaatcccaagcactagctcagacaca
aggcagctctcattagaaagtttggagagtgagacagaagctggcagtattgccactgtc
cctgccatcatggtcacacctgttacggaggcatcggaggaatcatctgagcagaatgtt
cctgtttctcaagctcatcctgaggttcttgacacagaagtggtggagctgttggaagat
gtggaggcactgaaagaaggagaggaagctgaagaacaagaagcagtagaaaaaggaagt
gagttagaaatgaaagaatcacaagaatttgcatcagaagacatttcccagccaagtatt
tcaggagaaccttctaggactagttctcagtctgcctcaacaacagggggatctgcagct
aaagctagacaagatctaagtaggggcagaggttcagttgtgcagttaaggaggccagcc
acaacatctacttggtccactacaaggggaggtacccaagctcaaagaggtacttcagca
tcaggaagagttcgtcgtctaagaagggatcctgtgagaggtcctggtgctcatcgtggt
cgtgggacacaaatgccccgtggcaggcagggcgggactccaagaggaggaggacaggca
taa
DBGET
integrated database retrieval system
