Pocillopora damicornis (lace coral): 113686465
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Entry
113686465 CDS
T05773
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113686465
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
113686465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_C
Med13_N
Motif
Other DBs
NCBI-GeneID:
113686465
NCBI-ProteinID:
XP_027059889
LinkDB
All DBs
Position
Unknown
AA seq
2127 aa
AA seq
DB search
MTASTPMLHGSDLDECCTNVFALTDLCGLKWRKYVFNFTCQANPSEDPVLKSFSAALSHD
ILCAWRRCPLTGCQSGGDPKSISGAKELWVFWFGDDPNLQGIVSAELKESCHGCWEDGLP
HEPRSLLFKALHNLLERCLLSRKFVRLGKWFTKPCESSLVENSSNHLSFSFSFFIHGESS
VCTAVEIQQQQKMRHLTLEDVAVAATKPEGLPVLLGPYGLSGFLTGQTSHMEEMVSAKLV
EEWKKFYPLDYSSDWSEPASLCQDKGVPVAVMVVVEETQMWYPSMYVVVPYEKNTPVDGS
VPPKTGAVTCSGPTSLTPPASPLDPNSTDVVTGPANLPPAPNLTSGGVIDKKKLTHSLVQ
EVWQEITVTKPAANKNTSLSSISKSTPSFMKADSSGDTTVPTGQWDFEEPFKRTSCSCTS
SSNISRPKAPAQVRSSFGISRPTPSPSYPLPSPQQQQQLQSTQQNQGNTKLKKEKKKPLV
PFHHRQSLDKERPEALKSHVGAMTKGLPTSNVSTSVTQKRHLEVAFPQNSRKYQSTPLVN
TSGISGPKGHAISAKTEDKCLQPPTSLLKVNPSILSSKAIANNQAEMTAKVESNNFEDFV
GNKDSTASEDTVKKCYALPSEVAFTVPLLPSDPLDCRPPGDLMVSKDVPTPSPLETTLWE
SSKRPSIDGGIECIPSPAKRRRESSTSRSRSDSTGGGGRLKGRRNSSQPSPATTPLSDPF
TPQPEELDMEMIQPPMKSPTQVKPPSNKPRRRSSATGGDSPSVPLPGELSKPPSRVKNRR
QSSRKKQQEEKERLSKEMEEIKPCPVVNEKGTFPSFSSSDDEHEPIARLPTNLMTEQDLA
VTVNDLDQLFDTDEEDDEQSKAMKIDFVSNQVAPFDPIMNINTPHTIMSTVGVTNQDLAR
MFPTPPSQETVTHSPPCSVGNDYISPGSVKTIMHNTVLSPESHLMHLAGVDAEREKQHSP
MELGPVFEIPKVQEFPVSYSFEAVVGLPDYQGLPSVMQYSPSWQQASQRNWTSSETKVES
ATEVLSCDITIGAPSPAVGFTNTHPASVNSDVKHLTSAAMSPASPASSVSSFSMPMQFPK
TFHGSSLVVKPIFQTPLPEANSLSKVLNLSDSCANYFSDKCYDSVSLCSCLTSSEGVQAK
GNKGRDSDYCVCGFGALEAVKFTAGTGLFPDDIHSTSAENVKTLKKVNNVPQSAVEVKKE
GSVSHCVRRRASATAVSSQVPFCLLEEIVSQCSSPFSCYNLKLQLMFKGHHGIVKHVSGA
WSQNKGAENGIPQKVPHPTAVGALNFLRQLMQDALQKSTSRKTWEQPNGTVVQGPLSWKQ
LHHLATKGNEETPHAQPIPSVTVGYGGDWMSLSPIALHFWEKLLLEPYSCQRDVAYIVVA
PENELVLNNVKLFFKEFSAVYETCRLGQHVAITKVLRDGILRIGQKSLKLAKEPVDDWFS
HQGCSSDAAKLKLYAQVFKHQLGPYLASLNLDRHLLELEKGDKSDDKGPSKFGSDVGMDS
TPKPGSTSAGTPNSEQAPSAFGEDESEQNSEDPPTVVVYIVNPFSNSSREESFPSYVGLL
RCIADILPDLTESNKKNVVFQVVPIQQILQVDTLNGSRDATLTFVTQLKCLAFSVFSRCR
KSLQLNINAKSLTGFGPAARHEALLRQREMENAKVYAAPYVLCHPIPMPPSDSADENATS
LQALAQNASVLYCGYCLSHDDNYLLAVCTDSVGELIESCVITVEKCLRPDGRPRKTPART
KALIKLWEFCQGVVATSLVPWRLVVSKLGRIGPEELKDWKEILSKTSVMAGDQKFNDTCK
ACFSLKQKNRPAILGTSLTSLEPEPSIRLYMARALPKVNVLFEGNSSTRVSVGAVPKPDV
SRTYIAVMPVASLKCTMGNQSSAKMHALPETTTETVVTDTDILLAGVDDDENDQDPLRHL
FPLLNSSPPSLSPTGCILPSPLDTSPIQGTSPLTRPATLTASPGVSVSSPFQPISRLSPF
QPLHSTPSPSTANAATVEVQEDGDDKLSVPYAQGYIISTVQTGKMPGTFWASSSHSETCD
PVILKASLHIHNPDLMEGMNGFVTAWHPLATKSHCHVLRSILQTYDALSWLTVDPVNRDR
RSCLPVHLYMLCQLHETLTLLLENQSS
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcgactcccatgcttcatggctcagacttggatgaatgctgcaccaacgtg
tttgcactgactgatttatgtgggttaaaatggcgcaagtatgttttcaatttcacgtgc
caagccaatccttcagaggatcctgtgttgaagtcattttcagcagctctcagtcatgat
atcctatgtgcatggcggaggtgccctttgacaggctgtcaatcaggtggagatcctaag
agtatcagtggtgcaaaggaattgtgggttttctggtttggtgacgatcccaatttacaa
gggattgtatctgcagagctaaaagaatcatgccatgggtgttgggaagatggtttgcct
catgaaccaagatcgttattattcaaagctttacataatttattagaaagatgtctactg
tcaagaaaatttgttcgtttgggaaaatggtttacaaaaccatgtgaaagcagtttggtg
gagaattcaagcaatcatctttcattctcattttccttctttatccatggggagagttct
gtttgtacagctgttgaaattcaacagcaacagaagatgcgccatcttacacttgaagat
gtagctgttgcagcaaccaaaccggaagggctcccagttttactgggtccatatggattg
tcaggatttcttactgggcagacaagccacatggaagagatggtgtcagccaaacttgtg
gaagagtggaagaagttttatcctcttgactacagttctgattggagtgagccagcaagc
ttgtgtcaggataagggtgtgcctgtagcagtgatggttgttgtggaagaaacacagatg
tggtatccatccatgtatgttgttgtgccatatgagaagaatacaccagttgatgggtca
gtgccacccaaaactggtgcagtgacctgctctggtccaacatcactaacccctccagca
tctcctcttgatcccaactctacagatgttgttacaggtcctgcaaatctgcctccagca
cctaatttaacctcagggggagtcatagacaagaagaagctgacacattccttggtacaa
gaagtttggcaagagatcacagtcaccaaacctgcagcaaacaaaaacacctccctgagc
agtatttcaaaatcaactccatcttttatgaaggcagacagttcaggtgataccactgta
ccaacaggacaatgggattttgaggagcctttcaagcgcacttcctgttcttgtacctca
agtagtaacattagcagaccaaaggcaccagctcaagtccggtcatcatttggtataagc
agaccaacaccatcccctagctatccactaccttcgcctcagcaacaacaacaactgcaa
tccacacaacaaaatcaggggaatacaaagttgaagaaagaaaagaagaaaccattggtg
ccctttcatcatcgtcagagtcttgataaagagagacctgaagctctgaaaagtcatgtt
ggagcaatgaccaaaggcttacctacgtcaaatgtatcgacaagtgtcactcaaaaacgt
catctggaagttgcttttccacagaactcaaggaaatatcaatcaacacctcttgtgaac
acaagtggaatatcaggacccaaaggtcatgcgataagtgcgaagactgaggataaatgc
ttacaacctccaacttcacttctgaaagtaaacccttcaatattatcctcaaaggctatt
gccaataaccaagcagaaatgacagcgaaggtagaatcaaacaattttgaagattttgta
ggtaacaaagatagtactgcatcagaagatactgtgaagaagtgctatgctttgccttca
gaagttgctttcactgtccctctactgccaagtgatcctcttgactgtcgaccaccaggt
gatctgatggtatcaaaagatgttccaactccaagtccattagagacaactttgtgggaa
agcagtaagagaccttcaattgatggagggattgagtgcataccttcgcctgctaaaaga
agaagggaatcttccacaagcagatccaggtcagatagcacaggaggagggggtcgacta
aaggggcggaggaacagctcccaaccatctccagcaaccactcctctttctgatccattt
actcctcaacctgaggaactggacatggaaatgattcagccacccatgaaatcacccaca
caggtgaagcctccctcaaataagcctcggcggagaagtagtgccactggtggtgacagt
ccatcagtgccactaccaggagagctcagcaaaccaccttcacgggtgaaaaacagacgg
cagagctctcgcaaaaaacaacaagaggaaaaggaacgcttgtcaaaagagatggaagaa
atcaaaccttgcccagttgtgaatgagaaaggaacatttcctagtttttcatcttccgat
gatgaacatgaacccattgcccgcttgccaaccaatcttatgacagagcaagatcttgct
gtgactgtaaatgaccttgatcagttgtttgacacagatgaggaagatgatgaacaatca
aaagcaatgaagatagattttgtttcaaatcaggttgccccctttgatcctatcatgaac
ataaacactcctcatactattatgagcacagttggagtaacaaatcaagacttggcacgc
atgttccccacgcctccctcccaggaaacagtgacgcactcgccaccttgttctgttggc
aatgactacatcagcccgggaagtgttaagaccatcatgcacaatacagtgctttctcca
gaatcacatctgatgcatcttgctggtgttgatgctgaaagagagaaacagcacagtcca
atggaacttggcccagtgtttgagatcccaaaagtccaagagtttccagtctcctactcc
tttgaagctgtagttggtttgcctgattaccaggggctgccatctgtgatgcagtactca
ccttcatggcagcaggcatcccagaggaattggacatcgtcagaaaccaaagtggagagt
gctaccgaggtgttaagttgtgatattaccattggtgctccctcaccagcagttggattc
acaaacacccatcctgcaagtgttaacagtgatgtcaaacacttgacctctgcagcaatg
tctccagcttctccagcatcatcagtgtcatcattttctatgccgatgcaatttccaaag
acttttcatggaagtagccttgtggtgaaacccatatttcaaacacctctgccagaagca
aattctttatcaaaggttttgaacttgtcagactcatgcgcaaactactttagtgacaaa
tgctatgacagtgtaagtctctgttcttgtttgacatcctcagagggtgtgcaagccaaa
gggaacaaaggtagagactctgattactgcgtctgtggctttggtgctcttgaggcagta
aaattcactgctggcacaggtctatttcctgatgatatccactcaacctctgctgaaaat
gtgaaaactctgaaaaaggttaataatgttccacaatctgcagttgaagtgaaaaaggaa
ggttcagtgtcacactgtgtgaggagacgggcttcagctactgctgtttcctcacaagta
ccattttgtttgctagaggagattgtgagtcagtgttcttcgcctttttcttgttacaac
ttgaagttacaactcatgtttaagggtcatcatggaattgtcaaacatgtctcaggtgca
tggtcacaaaataaaggtgcagagaatggtataccacagaaagttcctcatccaactgca
gttggtgcgctcaacttccttcgtcaactaatgcaggatgctctgcaaaaatcaacaagc
agaaaaacttgggagcagcccaatggaacagtggttcagggacctttgtcttggaaacaa
cttcatcatctggcaactaaaggtaatgaggaaacaccacatgctcagccaattccatca
gtgacagtaggctatggaggagactggatgtccctttcgcctattgcattacatttctgg
gagaagctcttgcttgaaccttactcctgtcaacgtgatgttgcatacattgttgtagca
ccagagaacgagctagtgttgaataatgtgaagttgttctttaaggaattcagtgcagtg
tatgagacttgtcgtcttggtcaacatgttgccattaccaaggtgctcagagatggaata
ctgcggattggtcaaaagtcacttaaactcgcaaaagaacctgttgatgattggttctca
catcaaggttgttcatctgatgcagcaaaactaaaactgtatgcccaagtcttcaaacac
cagctgggaccatatctggcttcactaaatctagatagacaccttttggagttggagaag
ggagacaaatcagatgataaagggccttccaagtttggatcagatgttggcatggatagc
acacccaaacctggtagtaccagtgctggcacaccaaattcagagcaggctccatcagca
tttggagaagatgaaagtgaacagaacagtgaggacccacccactgtcgtagtttatatt
gtcaaccccttcagtaacagttccagagaggagagttttccttcatatgtggggctattg
cgatgcattgctgacattttgccagacctgacagaatccaacaaaaagaatgttgttttt
caggttgtccctatccaacagattctccaggtggataccttgaatggcagtcgagatgca
acattgacatttgtgacacagcttaagtgcttggccttctctgtgttctctaggtgccgg
aagagcctgcagttgaatataaatgctaaatctttgacaggatttgggcctgctgcaagg
catgaggctctattacgtcagagagagatggagaatgcaaaagtgtatgctgcaccgtat
gtcctctgccatcccatacctatgccaccaagtgactctgcagatgagaatgcaacaagt
ttgcaagcacttgcgcaaaatgcctcagtgttatactgtggttactgtctctcccatgat
gacaactatctcctcgctgtctgtactgatagtgttggagaactcatagaatcatgtgtc
ataacagttgaaaaatgcctgagacctgatggaaggccacgcaagactcctgcacgtaca
aaggcacttatcaagttgtgggaattctgtcaaggtgttgttgcaacatctcttgtacca
tggaggttggtggtcagtaagctcggaaggattggacctgaagaactgaaggactggaag
gaaatactgagtaagacgtctgttatggctggggaccagaagtttaatgacacctgcaaa
gcttgtttctctctgaaacagaaaaatcgccctgcaattcttggaaccagtctcacatca
ttggaacctgaaccctcaatcaggctttacatggcaagagccttaccaaaagttaatgtc
ctgtttgaaggcaatagcagtacacgtgtttcggttggtgctgttcccaaaccagatgta
tcacgaacatacattgccgtaatgccagttgcttctctgaaatgcaccatgggaaaccaa
tccagtgctaaaatgcatgctctaccagaaactaccacggaaacagttgtaacagacact
gacattttgttggctggtgttgatgatgacgagaatgatcaggatcctttacgtcacttg
tttccattgttgaactcatcaccacctagtctgtcaccaactggctgtattctgccgtct
cccctggacacctcaccaattcaggggacatcccccttgacacgtccagcaacgctgaca
gcatcccctggagtgtctgtatcgtctccattccaaccgatttcaaggctgtcaccattt
cagcccttacactctactccatccccatcaactgcaaatgcagctacagtagaagttcag
gaggatggagatgacaaactatctgtcccttatgctcagggttacattatttcaactgtg
caaactggcaagatgccaggaacattttgggcaagttcatcacactctgaaacttgtgat
cctgttattctgaaggcctctcttcatatacataacccagacttgatggagggaatgaat
ggttttgtcactgcatggcatccccttgccacaaagtcacactgtcatgtgttaaggtca
atcctacagacctatgatgctctgtcatggttaactgtggaccctgttaaccgagacaga
cgctcatgtttaccagttcatttgtatatgctatgccaacttcatgagacactcactctc
ctattggaaaaccagtcttcttaa
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integrated database retrieval system
