KEGG   Pocillopora damicornis (lace coral): 113686726
Entry
113686726         CDS       T05773                                 
Name
(RefSeq) THO complex subunit 2-like
  KO
K12879  THO complex subunit 2
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03013  Nucleocytoplasmic transport
pdam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113686726
  09122 Translation
   03013 Nucleocytoplasmic transport
    113686726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdam03019]
    113686726
   03041 Spliceosome [BR:pdam03041]
    113686726
Messenger RNA biogenesis [BR:pdam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113686726
Spliceosome [BR:pdam03041]
 Complex C
  Other components
   EJC/TREX
    113686726
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113686726
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 113686726
NCBI-ProteinID: XP_027060189
LinkDB
Position
Unknown
AA seq 1635 aa
MAAIVVPSNLVKNWEKSGKDEVFRLCKNCVRGKDGELLELNFQCGENDLKRVIYEVFNHV
IQGDLRQEDAIPLLSDVTEVHSGCSSLLADLICILDVESQCTEDKPSRERFLSLVGACVG
LVPEVLLKERLEVETLDSLGIIQSTKAFNQKYVRTKTKLFYKQQKFNLVREESEGYAKLV
TELGQEISGHVTSERVLENIKSLIGRFNLDPNKTLDVLLDSFECRIDVEDFFLPLLKSYM
EKCEFTALCHIIGFKFQFYKEQPDLPTPPSLFHLTALLIKHGLLNLDDLYLYLSPSDADI
VTSNTTRMDEAKQEARKMNMAVLAEIAAANNEEGNKENKENDKPTIVPDNQKFGLCEALL
MVGAWNNACSILDRLPQFAAVSHPPIAKGLCKLIHTTIEPLYRRHASKAARGRPYAPVPG
GPPQCKVFTDLPDYVFSMLLHLGPHLSTDPILMAKILRISKGFMKDHPNVFEEKEQNSAQ
VEKVWCGFLTLMDEVLLPSISLLECNSSLAEELWAMLCRFPYELRYRLYGQWKNESYSNH
PKMVVAKAATIKRAKYITKRLTKENVKPSGRQIGKLSHSNPGILFEYLLSQIQKYDNFIG
PVVDSLKYLTPLAYDVLAYCIIEALANPERERLKHEDTNISEWLKSLAVFCGTVFRKYSI
ELTGLLQYVANQLKAGKSFDLLVLKEVVQKMSGIEISEEVTAAQLEALSGGELLRAEGGY
FGQIRNTKKSSQRLRDTLIEGKLDLPLCLLMAQQRNGIVFFEDPDRHLKLVGKLYDQCQD
TLVQFGGFLASQLTAEEYESHVPSLDVLGQSYHLTPDVAFFLSRPMFVHQIDIKYEEAKK
AIAAKGKQLQQKQILQCYIEAVNSAMEPVFQSARLLQAPRVWNSISPQLYVTFWALSMFD
LYVPSERYEQELNKLKQQQAQLDDNKDMPVSKKKKEKERCSLLVEKLKEEFKQQEEHNQR
VMASLKHERDSWLPAKATKSETITQFLQLCMFPRCVFTASDAVYCAKFVHMLHNLKTPNF
STLLCFDRVFSDISYTVASCTENEASRYGRFLCSMLEIVMRWHGDKKTYDKECGTYPGFV
TVLRATNNDKADHLDYENYRHVCHKWQYKLTKALVVCLESKDYTQIRNTIMVLTKILPYY
PKVLNLGQALERRIDKICEEEKEKRQDIYTLAVGYAGRLKVKKRDMVIESEFHHKEKPLA
TTAPSSTQSEPVAVKQEKTEAQPTSTATSDSSKSAKNDTDVKPKLSVNIKKEPENSKSSS
PNSTKTDNTPTSQEKSAGKSSAGSSSAKSSGTSTPSGQTDSPGKNTPSNKSSSTSGNSNQ
PGSKTVASNSTSKGTKTPTSAKNSEGNTNGSDVSTGKKTESSKQKLKDKEKEKATEKEQN
DKPKEKLKGEKAEKAKEQKTKDKEKERSKSLEKEGKDKVKERLKDKEKERSGSKSKHSSP
AVPESPRDGEYEKEAKRRRLEGISSPSSQENSPSQVAGDSESFKSPENQERKSKLMDHEK
EKTLKSDRKRTSLEQGEGKEAKRRKEDGENTVTVSKTSNSHGSDAKVKVKGEEKSKMVKL
ARKPPADGSPPGKKEKEKAKDKEKDKDREKEKEVKPTASKKKESRHLEVKDSEPKEEQER
PRKHHSKSGSRNRRT
NT seq 4908 nt   +upstreamnt  +downstreamnt
atggcggctatcgttgtcccatccaatttagtaaagaattgggaaaaatcggggaaagat
gaagtgtttcgtttgtgcaagaactgcgtgcgaggcaaagatggagagcttctggaacta
aactttcaatgcggagagaatgatcttaaacgcgtgatctatgaagtatttaaccatgtt
attcaaggggatctaagacaggaagatgctataccgctcctgtcagatgtcacggaagtc
cattcaggatgttcatcactgctagctgacctgatatgtatcttggatgtggagagtcag
tgcacagaggacaagcccagcagggagaggttcttgtctctggtcggagcttgcgtggga
ttggttccagaagttctgctcaaggagaggcttgaagtggagacattggactcactagga
atcatacagtcaacaaaggcttttaatcagaaatatgtcaggaccaagactaaactattc
tataagcagcagaaatttaatcttgtgagagaggagagtgagggctatgccaaactggtg
acagaactgggacaagaaatcagtggacatgtcaccagtgagagagttctggagaacatc
aagtctctaatagggcggttcaatcttgatccaaacaaaactcttgatgtgttactggac
tcgtttgaatgccgcattgatgtagaggacttctttcttcctcttttgaaatcatacatg
gagaaatgtgaattcactgccctctgtcacatcataggctttaaattccagttttataag
gagcagcctgacttgcccacccctccatcacttttccatttgacagctctgcttataaag
catggtctactcaacttggatgacctttatctttatctcagtccctcagatgcagacatt
gtcaccagcaacacaacaagaatggatgaagccaaacaggaagcaaggaagatgaacatg
gctgtcttagcagaaattgctgcagcaaataatgaagaaggcaacaaggaaaataaagaa
aatgataaacctacaattgttccagataatcagaagtttggtttgtgtgaagcactgttg
atggtaggtgcgtggaataatgcttgttcaattctggacagattacctcagtttgctgct
gtgtcccatccccccatagccaagggattatgcaagcttattcatacaaccattgaacct
ctgtatcgaagacatgcttccaaggcagctagaggacgaccttatgcgcctgttccaggg
gggcctccacaatgcaaagtgttcactgatcttccagactatgtgttttccatgttgctt
catctgggccctcatttgtccactgatccaatcctaatggcaaaaatcctgaggatcagt
aaagggttcatgaaagatcatccaaatgtgtttgaggaaaaggagcagaattcagctcag
gttgagaaagtctggtgtggatttttgaccctaatggatgaagtcctgttgccatcaatt
tcattattggaatgtaactccagtttggctgaagaactttgggccatgttgtgtcgtttt
ccgtatgagctcaggtatcgcctctatggccagtggaaaaatgaatcttacagcaaccat
cctaaaatggttgtagcaaaagcagccacaataaagagagcaaaatacatcactaagagg
ttaactaaagaaaatgtcaagccctctggaaggcagattggcaaattgagtcacagcaat
ccaggcatattgtttgaatatctcttgtcacaaattcagaagtatgataactttattggg
cctgtggtggattcactgaagtacctcactcctttggcgtatgatgttttagcttattgt
atcattgaggctttggcaaatcctgaaagagaaaggctaaaacatgaagacactaacatc
tctgagtggctcaaaagtctagctgtattttgcggtactgtattccgcaagtattccatc
gagcttactggtcttctgcagtatgtggccaatcagctcaaagctggaaaaagttttgat
ttgcttgtgttgaaggaagttgttcagaaaatgtctggaatagaaatatcagaggaggtg
acagcagcgcaacttgaagctttgtctggtggcgaacttctgagggctgagggtggatac
tttggccagattagaaacaccaagaaatcttcccagaggttgagagacactctcatcgag
ggaaagttagatttgccgctctgcttgctcatggctcaacagaggaatggcattgtgttt
tttgaagatcctgatagacatctgaagcttgttggaaagctctatgaccagtgtcaagac
accttagtacagttcggtggctttctcgcctcgcagttaactgctgaagagtacgaatca
catgtaccgtccttggatgttttaggccaaagttatcatctaacacctgacgtggcattc
tttctgtctagacctatgtttgtccatcagatagatattaagtacgaggaagcaaagaaa
gcaatagctgccaaaggaaaacagcttcaacaaaaacaaattctgcagtgctacattgaa
gccgtgaattctgcgatggagcctgtgttccagagtgcacggctcttgcaggcaccaaga
gtctggaatagtatcagtcctcaattgtatgtgactttctgggcgctgtccatgtttgat
ctgtatgtaccatccgagagatacgaacaggaactgaataaattgaaacaacaacaagcg
cagctggatgataacaaggatatgccggtcagcaaaaagaagaaggaaaaagagaggtgt
tctcttttagtggaaaaattgaaagaagagtttaaacaacaggaagaacataaccaaaga
gtgatggcatcgcttaaacacgagagagactcatggctgccagctaaagcgacaaagagt
gagaccattacacagtttcttcagctctgtatgttcccgagatgtgtgtttactgcgagc
gatgctgtgtactgcgccaagtttgtccacatgctgcataatctcaaaacgccaaacttc
tcaacactgctctgctttgatagagtattttcagatatttcctacacagtggccagctgt
acagaaaatgaagccagtagatatggtcggtttttatgttcaatgcttgaaatagttatg
aggtggcacggtgacaagaaaacatacgataaggaatgtggaacttatccgggatttgtt
acagttttaagagctaccaacaacgataaagctgatcatttggactacgagaattacaga
cacgtttgccacaagtggcagtacaaactcacaaaggctcttgtggtgtgcttagaatct
aaggattatactcaaataaggaacacgattatggtgttaaccaagattttgccctattac
cctaaagtgttaaatcttggtcaagcgctggaaagaagaattgataagatctgtgaggag
gagaaggagaaacgacaggatatttacacgttagctgtagggtatgcaggtcgtttgaaa
gttaagaaaagagatatggtgatagagagcgaattccatcacaaggaaaagcctcttgca
accactgctccgtcgtcaactcagagtgaacctgttgctgtcaaacaggaaaaaaccgaa
gctcaaccaacttccacggcgacctcggactcatcaaaatctgcaaagaacgatacagat
gtgaagccgaagctctcagtgaacatcaaaaaagagccggagaactcaaaatcgtcgagt
cccaactcgaccaaaaccgacaacacgcccacatctcaagaaaaatcagctggcaaatca
agtgcaggctcatctagtgcgaaatcatctggcaccagtaccccaagtggtcaaactgac
tcgcctggaaaaaatacgcctagtaacaaatccagctctactagtggtaactcaaatcag
ccaggatccaaaactgttgcgtcaaattcaacctcaaaaggaacgaaaacacccaccagc
gctaaaaactcagaaggaaatacgaacggaagtgacgtgtctactggcaaaaagaccgag
tccagtaaacaaaagctcaaggacaaagaaaaagaaaaagctacggaaaaagaacaaaat
gacaaacccaaagaaaagttgaaaggagaaaaagcagagaaggctaaggaacagaaaacg
aaggacaaagagaaagagcgaagtaagagtcttgaaaaggaaggaaaagacaaagtgaaa
gaacgactgaaagataaggaaaaagaacggtcgggaagtaaaagtaaacattcctccccg
gctgtgcctgagtcgccgcgtgatggagagtacgaaaaagaagcgaagcgtcgccgactt
gaaggcatctcttcgccatcttcacaggagaactctccgtcgcaggttgctggtgattct
gagtcatttaagagtcctgaaaatcaggaacggaaatcaaaactgatggatcacgaaaag
gaaaagaccttaaaatcggacaggaaacggacttcgttagaacaaggtgaaggaaaagaa
gccaaaaggaggaaagaagacggagaaaatacagttactgtatccaagacatccaattcg
cacggatcagacgcaaaagtcaaagtgaaaggcgaggagaaatcaaaaatggtgaaactt
gctaggaaaccaccagcagatggttcacctcctggaaaaaaggagaaggaaaaagccaaa
gataaagaaaaagataaagaccgggaaaaggaaaaggaagttaaaccaactgcgagtaaa
aagaaagagtctcgtcaccttgaagtcaaagactctgaacccaaggaagaacaggaacgg
ccaaggaaacatcattccaagtcaggatcgagaaatcgcagaacatga

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