Paracoccus denitrificans: Pden_2145
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Entry
Pden_2145 CDS
T00440
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pde
Paracoccus denitrificans
Pathway
pde03030
DNA replication
pde03430
Mismatch repair
pde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pden_2145
03430 Mismatch repair
Pden_2145
03440 Homologous recombination
Pden_2145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pde03032
]
Pden_2145
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_2145
Enzymes [BR:
pde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pden_2145
DNA replication proteins [BR:
pde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pden_2145
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pden_2145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
AAA_22
AAA_14
nSTAND3
AAA_5
T2SSE
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ABL70237
UniProt:
A1B3Z3
LinkDB
All DBs
Position
1:2145508..2146605
Genome browser
AA seq
365 aa
AA seq
DB search
MRKSEMSDAPLPEPDRVPGAPHPRDAARIIGQDAAVADFLAAAQAHRLHHAWLISGPRGT
GKATLAWNIAKWLLSGAGTPDLTVPPDDPTIRRIRALSEPRLHLVRRPVDEKTLRLRAEI
TVDEIRRLQGFFHMSAAEGGHRVAIIDAADEMNQAAANALLKLLEEPPQASTLLLVAHQP
ARLLPTIRSRCRELRLHPLSPEDMGQVLHDLGLDHDAARLSALSGGSIGEALRLAGQDGL
AVYQRITGLFADYPRMDRRAAAALAEMAAGRAGAEGDPFDLVVTLLDRFLTRAARSGLLG
APLPEAAEGEAEVLSRISPDPAAARLWAAAQAQLSARARAGRAVNLDPSALVLDMLIGLA
NQPAV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatccgagatgagcgacgcgccgcttcccgaacccgaccgcgtccccggtgcc
ccgcacccacgcgatgcggcgcgcatcatcggtcaagacgccgcggtggcggacttcctg
gccgccgcccaggcgcatcgcctgcaccatgcctggctgatctcgggaccgcgcggcacc
ggcaaggccaccctggcgtggaacatcgcgaaatggctgctcagcggcgccggcacgccc
gacctgaccgtgccgcccgacgatccgaccatccgccgcatccgcgccttgtccgaaccg
cggctgcatctggtccgccgccccgtcgatgaaaagaccctgcgcctgcgcgccgagatc
accgtggacgagatccgccgccttcagggctttttccacatgagcgcggccgagggcggg
catcgcgtcgccatcatcgacgccgcagacgagatgaaccaggccgccgccaatgcgctg
ctgaagctgctggaggaaccgccgcaggcctcgaccctgctcttggtcgcgcatcagccg
gcgcggctcttaccgaccatccgttcgcgttgccgcgagttgcggctgcatccgctgagc
cccgaggacatgggccaggtgctgcacgaccttgggctcgaccacgacgcggcacggctc
tcggcactctcgggcggctcgatcggcgaggcgcttcggctcgccggacaggacgggctg
gccgtctatcagcgcatcactgggctttttgccgattatccgcgcatggaccgccgcgcc
gccgccgccttggccgagatggccgccggccgcgcgggggccgagggcgaccccttcgac
ctggtcgtgaccctgctcgaccgcttcctgacccgggccgcgcgcagcggcctgctgggc
gcccccctgcccgaggcggccgagggcgaggccgaggtgctcagccgcatttcccccgac
ccggcggcggcacggctttgggcggccgcccaggcccagctttcggcgcgggcccgcgcc
gggcgggcggtcaaccttgacccttccgcgctggtgttggatatgctgatcgggcttgcg
aaccagcctgccgtctga
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