Paracoccus denitrificans: Pden_2794
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Entry
Pden_2794 CDS
T00440
Name
(GenBank) UvrD-like DNA helicase, C-terminal domain
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pde
Paracoccus denitrificans
Brite
KEGG Orthology (KO) [BR:
pde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pde03400
]
Pden_2794
Enzymes [BR:
pde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pden_2794
DNA repair and recombination proteins [BR:
pde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pden_2794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABL70878
UniProt:
A1B5T4
LinkDB
All DBs
Position
1:complement(2811921..2815295)
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AA seq
1124 aa
AA seq
DB search
MMDEATLAQVRAADPHRSTWLTANAGSGKTRVLTDRVARLLLAGTAPERILCLTYTKAAA
SEMQNRLLARLGRWAMLPEAELRAELARLGEAGAPDLPAARRLFARAIETPGGLKVQTIH
SFCAGVLRRFPIEAGVPHGFTELDDRSAALIRAEIIEEMARDHAPELQDLLALHSGERLD
AFLAGLRGFEAPADRDALWAACGLAPGEDMQSLLAECFAAGATVIAALVPHLLKSGANDQ
KAAAKLAPGNWVQPGPAELAILESVLLTGASAKEPFTAKYDSFPTKALRNGPCAELLDDL
AILMERVEAARPRRIALAHAERTLALNRFGHAFLNRYRAQKAAHGRLDFDDLIDRTARLL
SENSMAQWVLFRLDGGIDHILVDEAQDTSPAQWQVIERLTDEFTSGQGARDQTRSLFVVG
DPKQSIYSFQGADIAVFEARRTGFAQAFDAVQEPMQVLELRHSFRSSTAILALVDQVFAG
DAARGLGDPPQHRAFRTDMPGRVDLWPAIPKPEKPEPGDWTDPVDLPAENSETVQLARAV
ARAVGEMLGQPIFDAKTGRLRRIRAGDVLILVQRRSELFAEIIAALKAANLPVAGADRLK
LAGEMAVQDIRALLSVLATPEDDLSLAACLRSPLFDLSEEELYRLAAGRKRGQYLWRRLR
ESHHRHAVEVLADLMGQTGFMRPYDLIQRLLIRHGGRERLVARLGPEAQDGIDELLSQAL
SYESSETPSLTGFLVWLTGDDVEVRRQPGSAGDGEGLIRVMTVHGSKGLESPIVIMPDAA
KRKPPREAPVLPGPDGLSLWRGRKGERPDPVEELAAMQTERQLQERKRLLYVGLTRAESW
LIVAAAGETGAGEDSWHAMVEAGMGRADLTETRLPAPWGGEIRRLSFGDWPETAPDAVLA
ERPLPAEPDWLRAPPPPAPGKVRPVAATALGGAKVIGAAGEGDAEAAMLFGTRLHLLLEH
LPGRDPADWPELARDVLADAEGGLPGPNELAALLTEARAVIEAPDLAQVFALSDTAEVLA
EVALAAPVPGIGTMTGAVDRLVVEPGRILAVDYKSNREVPDTPDAVPLGILRQMAAYRAA
LRLIWPAIRVEVAVLWTASRSLMALPDDLLDRVMAGLDPNRPGA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaggccacccttgcgcaggtgcgggcggctgacccgcatcgctcgacctgg
ctgacggccaatgccggctcgggcaagacgcgagtgctgaccgaccgggtggcgcggctg
cttctggccgggacggcgcccgagcgcatcctgtgcctgacctataccaaggcggcggcg
agcgagatgcagaaccgcctgctggcgcggctgggccgatgggccatgctgcccgaggcg
gaactgcgcgccgaactggcgcggctgggcgaggcgggcgcccccgacctgcccgccgcg
cgccggcttttcgcccgcgccatcgagacgccgggcgggctgaaggtccagaccatccac
agcttctgtgccggggtcttgcgccgctttccgatcgaggccggcgtgccgcatggcttt
accgagcttgacgaccgcagcgccgccctgatccgcgccgagatcatcgaggaaatggcc
cgcgaccatgcgcccgagttgcaggacctgctggcgctgcattcgggcgagaggctcgac
gccttcctcgccggtctgcgcgggttcgaggcccctgcggaccgggacgcgctttgggcg
gcctgcgggctggcgccgggcgaggatatgcagtcgctcttggcggaatgctttgccgct
ggcgctacggtgatcgccgcgctggtcccgcatctgctgaaaagcggcgcgaacgaccag
aaggcggcggcgaagcttgcgcccggcaattgggtgcagcctgggccggcggaactggcg
atcctggaatccgtgctgctgaccggggcaagcgccaaggaaccctttaccgcgaaatac
gacagcttccccaccaaggcgctgcgcaacggtccttgcgcggaactgctggacgacctc
gccatcctgatggagcgggtcgaggccgcccgcccgcgtcgcatcgcactggcccatgcc
gaacggacgctggcgctgaatcgcttcggccatgccttcctgaaccgctatcgcgcgcag
aaggcggcgcatggccggctggatttcgacgacctgatcgaccgcaccgcgcggcttctg
tcggaaaacagcatggcgcaatgggtgctgttccgcctggacggcggcatcgaccatatc
ctggtcgacgaggcgcaggacaccagccccgcgcaatggcaggtgatcgagcggttgacc
gacgagttcacctcgggccagggcgcgcgcgaccagacccgcagcctgttcgtggtgggc
gacccgaaacagtcgatctacagcttccagggcgccgacatcgcggttttcgaggctcgc
cggaccggctttgcgcaagccttcgacgctgtgcaagagccgatgcaggtgctggagctg
cggcattccttccgcagctcgaccgcgatccttgcgctggtcgatcaggtctttgccggc
gatgcggcgcgcggcctgggcgatccgccgcagcatcgcgcctttcgcaccgacatgccg
gggcgcgtggacctgtggccggcgatccccaagcccgaaaagcccgagccgggcgattgg
accgacccggtggacctgccggccgagaactccgagacggtgcaactggcccgcgccgtc
gcccgcgccgtcggcgagatgctgggccagccgatcttcgacgccaagaccggcaggcta
cgccgcatccgcgccggcgacgtgctgatcctggtccagcgccgctcggaactgttcgcc
gagatcatcgccgcgctgaaagccgcgaacctgcccgtcgccggcgccgaccggctgaag
ttggccggagagatggcggtgcaggacatccgcgccctgctgtcggtgctggccacgccc
gaggacgacctgtcgctggccgcttgcctgcgctcgccgctgttcgacctgtccgaggag
gagctttaccgccttgctgccgggcgcaagcgcggccaatacctgtggcggcgtctgcgc
gagtcgcatcatcgccatgcggtcgaggtgctggccgacctgatgggccagaccggcttc
atgcgcccttatgacctgatccagcgcctgctgatccggcatggcgggcgcgagcgtctg
gtcgcccggcttggccccgaggcgcaggacggcatcgacgaactgctgtcgcaggcgctg
agctatgaaagctcggaaacgccctcgctgaccggcttcctggtctggctgaccggcgac
gatgtcgaggtgcgccgccagccgggctcggccggggatggcgaggggctgatccgggtg
atgaccgtgcatggctcgaagggcctggaaagccccatcgtcatcatgcccgacgcggcc
aagcgcaaacccccgcgcgaggcgccggtgctgcccggcccggacgggctgtccctgtgg
cgcggcaggaagggcgaacggcccgatccggtcgaggaactggcggcgatgcagaccgag
cggcagttgcaggaacgcaagcggctgctctatgtcggcctgacccgtgccgaaagctgg
ctgatcgtcgcggcggcgggcgagaccggcgcgggcgaggacagctggcacgccatggtc
gaggccggcatgggccgcgccgatttgaccgagacgcgcctgcccgccccatggggtggc
gagatccgacggctgtcctttggcgactggcctgaaaccgcgccggatgcggtgctggcg
gaaagacccctgccggccgagccggactggctgcgcgccccgccgccgcccgcgcccggg
aaggtccgacccgtcgctgcgacggccttgggcggtgccaaggtgatcggtgcggcgggc
gagggcgatgccgaggcggcgatgctgttcggcaccaggctgcatctgctgctggagcat
ctgccgggccgcgaccctgcggattggcccgaactggcccgcgacgtgctggccgatgcc
gagggcggcttgcccggccccaacgaactggccgcgctgctgaccgaggcccgcgcggtg
atcgaggcgccggatctggcacaggtctttgcgctctccgacacggccgaggtgctggcc
gaggtggcgctggctgcgcccgttccgggcatcggcaccatgacgggggcggtggaccgg
ctggtggtggaaccggggcggatcctggcggtggactacaagtcgaaccgcgaggtgccg
gatacacccgacgcggtgccgctgggcatcctgcggcagatggcggcctatcgcgcggcg
ctgcggctgatctggccggccatccgggtcgaggtcgcggtgctgtggacggcctcgcgc
agcctgatggcgctgcccgacgacctgctggatcgggtgatggcgggccttgaccccaac
cgccccggtgcctag
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