Paracoccus denitrificans: Pden_3082
Help
Entry
Pden_3082 CDS
T00440
Name
(GenBank) outer membrane autotransporter barrel domain
Organism
pde
Paracoccus denitrificans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
ABL71163
UniProt:
A1B6L9
LinkDB
All DBs
Position
2:complement(263530..267024)
Genome browser
AA seq
1164 aa
AA seq
DB search
MVTCNTIGNRKFLLRRLGGSTAGLALLVGLGLASSPALSDPRSVPLDYLYVKDDKGNDEL
SRITIWVSTNDGQRRQMLFDTGSDSANMQLGSDVSGVKPTPGTEPRGYFYGDGTYGYLLQ
QVDVDDIAYHAADGSESFTLPVAGQSTYQVARIVDVIYTADYTGPEKPMLSADPVYVVTN
EDGSKTAYYADLNARKQMAQDKPIDDGGTLWGTFGAGDYLGREWASTSGLIGRATKTGYV
IAANGNTESGKQGLTPGCSPCLIVDVNSAVRAQFTSVMPWGDKNGDDAKGTLPNFPGSGA
PASAEFEGNYTLAFGDDDAAPSLTKVATLLDTGTPGGGQITISTARLNALVASGVRVDID
KDGNKTIPSLNLVAGEGMPVGLSNIDVVEIEGNADTPVQFIAGMDFFVSQSVMYDLENQS
TAYTPYFVSANNFTTDTPAVDEIGLSRVTAEMGSPFPMKDDDGTEYTVGYFGAAGVISGA
GDLTVAKHAQLRLSNANTYTGQTVIETDGKLELAGIGSIETSSRVVADGTLDIGDKGNRI
AFWGVSDAYNDARIRSLSGSGTVLLYDRNLVLTAAQDSFRGTITDLDAENTHHGGGLIVQ
GGVQTLAGNNQYTGATRINTGAGLVLTSKGSLASKVLVSGGFANDGTVNDHTTVQNGGTA
GGTGTFHGLTVADGGAVATGGAVPLKVEGSFTQQAGSTLVFGPVAGGAQPGIAVSDQALI
ENGASVTLDRATAGRLSLGREYLLLDATGGVSGGYNMLAGDLVTDAPFLSFALNNSPANV
VLEVRRSDIAFADVAQSANQASSAFGLESLGSGNPLYDEALYLGASEAASAFDSVSGEIH
ASMQGALIDESHFLRDAVNGRLRAAFGTVGASKSGVMALTADGAVDAVATIDGPVYWGHA
FGARGRTDGDGNAAQLDRRTHGLVLGYDAPVEDWRLGGVLAMSDSSYDVDDRVSSGSGNG
IHLGAYAGTEWGQTALRAGLTYSDYRLKTDRHAAIGEMAAPLSSKYNGHVWQAFAEVGHR
VDHGNMALEPYAGLAHVRLRTDSFAERGGSMALGGAEGVMNTTFTMIGLRAATTIRSAEH
DLAVSGGIGWRHAFGDVDPELAMAFAGGANFDIAGAAIARNAAVLDLGVDMNLGKKAIMR
LDYQGQLASDAREHRLGATFSMRF
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgtgcaatacgattgggaatcgcaagttcctgctcagacggcttggcgggtcg
acggctgggctggctctgcttgtcgggctgggcctggcatcatctccggccttatccgat
ccaaggtcagtcccacttgattacctgtatgttaaggacgacaaggggaatgacgagctc
agtcgcatcaccatctgggtttccacaaatgatggtcagcgacggcagatgctgttcgac
accggttcggatagcgccaatatgcagctcggttccgatgtcagcggggtgaaaccgaca
ccgggcactgagccccgaggctatttctatggtgacggcacctatggctacctgttgcag
caggtcgatgtagatgacatcgcctatcatgcagcagacggctccgagagctttaccctg
ccggttgcggggcaatccacctatcaggtggcgcggatcgtcgatgtcatttacacggcc
gattacacggggccggaaaagccgatgctgagcgcggatcctgtctatgtcgttaccaac
gaggatgggtcgaagacagcctattatgccgacctcaatgcccgcaagcagatggcacag
gacaagcccattgacgatggcggaaccctttggggaaccttcggtgccggcgactacctg
ggccgcgaatgggcaagcacatcggggctgatcgggcgggcgacgaagacgggctatgtc
attgccgccaacggcaataccgagtcgggcaagcagggtcttacaccgggttgttccccc
tgcctgatcgtggatgtgaattctgcggttcgtgcacagttcacctcggtcatgccctgg
ggcgacaagaatggcgacgacgccaagggtaccttgcctaacttccccggatctggcgca
cctgcctctgccgagttcgaggggaattacaccctggcattcggtgacgatgatgccgcc
cccagcctcaccaaggttgccacgttgctggacaccggaacaccaggcggtgggcagatc
accatcagcacggcgcgtctgaatgcccttgtcgcgtccggggtcagggtcgacatcgac
aaggatggcaacaagacgatcccttcgctgaatcttgtggcgggggagggtatgccggtc
ggtctttccaacattgatgtcgtcgagatcgaggggaacgcagacacgccggtgcagttc
atagctggtatggacttctttgtgagccagtcggtcatgtatgacctggaaaaccagtcc
accgcctatacgccatattttgtcagcgccaacaatttcaccacggatacccctgctgtg
gacgaaatcgggctgtcgcgggtaacggcagagatgggcagcccgtttcccatgaaggat
gatgacgggaccgaatacaccgttggctatttcggcgcggccggggtgatctcgggcgct
ggcgatctgacggtggcaaaacacgcccagttgcggctttccaatgccaacacctatacc
ggtcagaccgtgattgagacggatggcaagctcgaactggccggcatcggcagcatcgaa
acctcgtcgcgggtggtggcggatggcacgctggacatcggcgacaagggtaatcgcatc
gcattctggggggtgtcagatgcgtataatgatgcgcggattcgcagcctgtccggctct
ggcacggtgctgctttacgaccgcaatctggtgctgacggcggcgcaggacagtttcaga
gggacgatcaccgaccttgacgcggaaaacacgcatcacggcggcggcctgatcgttcag
ggtggcgtgcagacgctggccggcaacaatcagtataccggtgcgaccaggatcaatacc
ggtgcaggattggtcctgacctcgaaagggtcgcttgccagtaaggttcttgtttccggc
ggttttgccaatgacggcaccgtgaatgatcatacgaccgtgcagaatggcggcacggca
ggcggcacgggcaccttccacggcttgacggtagccgatggcggcgcggtagccacaggc
ggcgcggtaccgttgaaggttgaaggaagctttacccagcaggcaggctcgaccctcgta
ttcggtccggtggctgggggtgcccaacccggtatcgctgtctcggatcaggcgttgatc
gaaaatggcgcaagcgtaacacttgaccgcgccacggctgggcgactgtcgctgggacgc
gagtatctgttgctggacgcaactggcggcgtctctggtggttataacatgctggcgggg
gatctggtgacggatgcaccgttcctcagctttgcgctgaacaattctcctgccaatgtt
gtgctggaggtgaggcgttcggatatcgccttcgccgatgtggcacaaagcgcgaaccag
gcttcttcggctttcgggctggagtcactgggcagcggcaacccgctttatgatgaggca
ctttatctaggtgcctctgaggcggcgagcgccttcgactcggtctcgggcgagatccat
gcatcaatgcagggggcgttgatcgacgaaagccactttctgcgcgatgcggtaaacgga
cgtctgcgcgcagcattcgggacggtcggcgcctcgaagagtggcgtaatggccttgacc
gccgacggggcggtcgatgccgtcgccacgattgatgggccggtctattggggccatgcc
tttggcgcccggggtcggacagatggcgatggcaatgctgcgcagcttgaccgcagaacc
cacggccttgtccttggctatgatgcgccagtcgaggattggcggctgggcggcgtgctg
gcgatgagcgacagctcgtatgacgtggatgatcgagtttcctcaggatcaggaaacggg
atccatctcggggcctatgccggcacggaatgggggcagactgccctgcgtgccgggttg
acctattcggattaccgcttgaagacagatcgccacgccgccatcggtgaaatggccgcg
ccgctctcgtcgaaatataatgggcatgtctggcaagcgtttgcggaggtcggccaccgt
gtcgatcacggcaacatggcactggagccctatgccgggctggcccatgtccggttgcgc
acagacagcttcgccgaacgtggcggcagcatggcgcttgggggtgcagaaggggtgatg
aacacgaccttcaccatgatcgggttgcgcgcggctacgacgatcagatctgctgagcat
gacctcgcggtcagcggcggaatcggctggcgccatgccttcggtgacgttgacccggaa
ctggcaatggcctttgccgggggcgcaaacttcgacatcgccggcgcggcaattgcccgc
aacgcggctgtgctggacctgggcgtcgacatgaaccttggaaagaaggcaatcatgcga
ctggactatcagggccagcttgcctcggacgcgcgcgagcaccgccttggcgccaccttc
agtatgcgtttctag
DBGET
integrated database retrieval system
