Clostridioides difficile 630Derm: CD630DERM_32560
Help
Entry
CD630DERM_32560 CDS
T03785
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CD630DERM_32560 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdf01007
]
CD630DERM_32560 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdf03016
]
CD630DERM_32560 (valS)
Enzymes [BR:
pdf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CD630DERM_32560 (valS)
Amino acid related enzymes [BR:
pdf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CD630DERM_32560 (valS)
Transfer RNA biogenesis [BR:
pdf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CD630DERM_32560 (valS)
Prokaryotic type
CD630DERM_32560 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
RUBY_RBDX
CCDC138_cc
DUF1664
tRNA-synt_1f
GapR_DNA-bd
Zn-ribbon_8
zf-C2HC5
DUF6487
HypA
tRNA-synt_1b
DZR
DUF3450
Uds1
TF_Zn_Ribbon
Spt4
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
CEJ99908
LinkDB
All DBs
Position
1:complement(3768481..3771147)
Genome browser
AA seq
888 aa
AA seq
DB search
MENTNLSKTYNPKDFEARLYKKWMDEGYFKSKPNPDKKPFTIMMPPPNITGQLHMGHALD
HTLQDILIRWKRMDGYEAFWLPGTDHASIATEVKVVERIKKQEGKTKYEIGREEFLKRAW
EWKDEFGGKISNQLKQLGDSCDWDKERFTMDEGCNEAVIEFFVSLYEKGHIYRGNRIINW
CPDCKTTLSDAEVEHEEHDGNFYHIKYPLKDSEDFLEIATTRPETMIGDTGIAVNPEDDR
YKHLIGKTAILPLVGRELPIVADSYVDLEFGTGAVKMTPAHDPNDFEVGLRHNLEQLNTM
NEDGTMNEVCGKYEGMDRFECRKAIVADLKEQGYLIKIKEHNHNVGTCYRCHTVVEPRLS
EQWFVKMEELAKPAIDILKKGELEFVPDKFDKTYLQWLENIRDWCISRQLWWGHQIPAYY
CQECGEIVVARKMPDKCPKCGSTHFKQDEDALDTWFSSALWPFSTLGWPNKTEALDYYYP
TSVLVTGYDIIFFWVVRMAFAGMFCMNEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLE
IIEQYGADALRFTLTTGNSPENDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNM
TRESVKEDLTLADKWIISRANNIVKEATNNMDKFDLGIALQKIYDFTWSEYCDWYIEMVK
PRLYGEDANAKSAALYTLTYVLEKILKLLHPYMPFITEEIYTHLPTVEGCIIVSEWPKYN
EEDNMAEEEDMMNLLMEGIRSIRNVRAEMNVPPSKKAKLIIIPSEEKIEAIELGKDYFIT
LASASNVEIAKDKSNVPEDAVGVVIDGVEIFIPLNELVDFEKEIERLSKEKKKLEGEIKR
VNGKLANQGFLAKAPESLIEEEKAKKEKFEEMIKSVEERLTNLESKIK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacgaatttatcaaaaacttataacccaaaagattttgaggctaggctatat
aaaaaatggatggatgaagggtattttaaatctaaaccaaatccagataaaaaaccattt
acaataatgatgccaccaccaaatataacagggcaattgcatatgggacacgctcttgac
catacacttcaagatatattaatcagatggaaacgtatggatggatatgaagctttttgg
cttccaggaactgaccatgcttctatagcaacagaagttaaagttgttgaaagaataaaa
aaacaagaaggcaagacaaagtatgaaataggtagagaagaatttttaaagagagcctgg
gaatggaaagatgaatttggaggaaaaatatctaatcagcttaaacaactaggtgattct
tgtgattgggataaagaaagatttactatggatgaagggtgtaatgaagcagttatagaa
ttttttgtaagcctatatgaaaaaggtcacatatacagaggaaatagaataataaactgg
tgcccagattgcaaaactactttatcagatgcagaagttgaacatgaagaacacgacgga
aacttttatcatataaagtacccactaaaagatagtgaagactttttagaaatagctaca
actagacctgagacaatgataggagatactggtatagcagtaaatccagaagatgataga
tataaacatttaataggaaaaacagcaatacttccattagtaggaagagaacttccaata
gttgcagatagttatgttgatttagagtttggaactggtgcagttaagatgactccagca
catgaccctaatgattttgaagtaggattaagacataatcttgagcagttaaatactatg
aatgaagatggaactatgaatgaagtttgtggaaaatatgaaggtatggatagatttgag
tgtagaaaagctatcgtagcagacttaaaagaacaaggttacctaattaagataaaagag
cataatcataatgtaggaacttgttatagatgccatacagtagttgagcctagattatca
gagcaatggtttgttaagatggaagaacttgcaaaaccagctatagatattcttaaaaaa
ggagaattagaatttgttccagataaatttgataaaacttatttacaatggctagaaaat
ataagagattggtgtatatcaagacaattatggtggggtcatcaaataccagcttattat
tgtcaagagtgtggagaaatagtagttgctagaaaaatgccagataagtgtcctaaatgt
ggaagcactcattttaaacaagatgaagatgccttagatacttggttcagttctgcatta
tggcctttctctactctaggatggccaaataagactgaagctttagattattattatcca
acaagtgtacttgttacaggatacgatataatattcttctgggtagttagaatggcattt
gcaggtatgttctgtatgaatgaaaagccatttgaccatgttttggttcatggattagta
agagattctcaaggtagaaaaatgagtaaatctttaggaaatggtatcgacccattggag
ataatcgagcaatatggagctgatgccctaagatttacattaacaactggaaattcccca
gaaaatgatatgagattctatatggaaagagtagaatttgctagaaactttgcaaataag
ttgtggaatgcatcaagatttgtatttatgaatattgatgaagatataattaaaaacatg
actagagaaagtgttaaagaggacttaactctagctgataaatggataatatcaagagca
aataatattgtaaaagaagcaactaataacatggataagtttgatttaggaatagcactt
caaaagatatacgattttacttggtcagaatactgtgactggtatattgaaatggttaaa
cctagattatatggagaagatgcaaatgctaaatctgcagcattatatacattaacttat
gttcttgaaaaaatattaaaattattacatccatacatgccatttataacagaggaaata
tatactcatcttcctactgttgaaggatgtataatagtatctgaatggccaaaatataat
gaagaagataacatggctgaagaagaagatatgatgaacttattgatggaaggtataaga
agtataagaaatgtgagagcagaaatgaatgtaccaccttctaagaaagctaaattgata
ataatcccaagtgaagaaaaaatagaagctattgagcttggtaaagactattttataact
ttagcatctgcttcaaatgtagagatagcaaaagataaatctaatgttccagaagatgca
gttggagtagttattgatggtgttgaaatatttatacctcttaatgaattagttgatttt
gaaaaagaaattgagagattgtctaaagaaaagaaaaagttagaaggcgaaataaagaga
gttaatggaaagcttgcaaatcaaggtttcttagcaaaagctcctgaaagtttaattgaa
gaagaaaaagcaaaaaaagaaaaatttgaagagatgattaaatctgttgaggaaagatta
acaaatttagaatctaaaataaaataa
DBGET
integrated database retrieval system
