Clostridioides difficile 630Derm: CD630DERM_34110
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Entry
CD630DERM_34110 CDS
T03785
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pdf
Clostridioides difficile 630Derm
Pathway
pdf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD630DERM_34110 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdf03400
]
CD630DERM_34110 (uvrA)
DNA repair and recombination proteins [BR:
pdf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD630DERM_34110 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CD630DERM_34110 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_21
AAA_22
AAA_16
nSTAND3
nSTAND1
DnaJ_CXXCXGXG
AAA_23
APS_kinase
ATPase
Viral_helicase1
MMR_HSR1
cobW
NACHT
AAA_15
Motif
Other DBs
NCBI-ProteinID:
CEK00120
LinkDB
All DBs
Position
1:complement(3996142..3998967)
Genome browser
AA seq
941 aa
AA seq
DB search
MEDKIIIRGAKEHNLKNIDLELPRDKFIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGQMEKPNVEYIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGDVY
CPTCGEKISQMTIQEIVDKMLDFPDRTKLQILSPIVRGQKGTHKKVFDNIKKEGFVRVRV
NGENYEVSDDIILNKNQKHNIEVVVDRIVIKDGIESRLADSIETAVKLSDGLVIAQIIDG
EEILFSTKFACPEHGIGIEELSPRMFSFNAPFGACDVCNGLGESKEVDPELVVPNKDLSI
KQGAVAAWGSTGVNDDTYYSKMIKSLAEHFNVSLTTPFKDLPDDFVEELLYGKDNIIVEF
TYESKFGGTRNYKSYFEGVIVNLERRYRETNSDYMRDKIEEYMAERPCPKCKGMRLKKEV
LSVLVDGKNIMEVTNLSVNELIDFMENINLTEKQRFIAHEIIKEIKGRAMFLRDVGLDYL
NLSRKAGTLSGGEAQRIRLATQIGSALVGVLYVLDEPSIGLHQRDNDRLITTLRHLTDLG
NTLIVVEHDEDTMREADYVIDIGPGAGIHGGEIVAQGTLDEIIENENSITGQYLSGKKQI
LLPETTREGNGSFIEIVKASENNLKNIDVKFPLGKFTCITGVSGSGKSTLINDILYKGVA
SKVNRLKQRAGKHKEIKGIESIDKVINIDQSPIGRTPRSNPATYTGVFDFIRDIFASTNE
AKARGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEICKGERYNRETLQVKY
KDKTISDILDMNVEEAVEFFENIPNIKRKLETLMDVGLSYIKLGQPSTQLSGGEAQRIKL
AAELSKRPTGKTLYILDEPTTGLHMADVDKLIQVLQRLADTGNTIIVIEHNLDVIKTCDY
VIDLGPEGGDKGGTIVATGTPKEVSKVDGSYTGQFLKKYFS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaaattataataagaggagcaaaagaacataatttaaaaaatatagattta
gaattaccaagagataaatttattgtttttacaggtttgtcagggtctgggaagtcttct
ttggcatttgatacaatatatgcagaaggacagagaagatatgtagaaagtctatctgct
tatgcaagacaatttttaggtcagatggaaaagccaaatgtagaatatatagagggttta
tcaccagctatctcaattgaccagaagactacctcaaaaaacccacgttctacggttgga
acagtaacagaaatatatgattatttgagactattatttgcaagagtaggagatgtgtat
tgccctacatgtggtgaaaaaataagtcagatgactattcaagaaatagttgataaaatg
ctagattttccagatagaacgaaattacaaattctttcaccaattgttagaggacaaaaa
ggtacacataaaaaagtctttgataatatcaaaaaagaaggatttgtaagagttagagtt
aatggtgaaaactatgaagttagtgatgatataatcttaaataaaaatcaaaaacataat
atagaagttgtagtggacagaatagtaattaaagatggaatagaatcaagactagcagat
tcaattgaaactgcagttaagctatctgatggtcttgtaatagcccaaataatagatgga
gaagaaattcttttttcaactaaatttgcatgcccagaacatggaattggcatagaagaa
ttatctccaagaatgttttcatttaatgctccctttggtgcttgtgatgtttgtaatggt
cttggggaaagtaaagaagttgacccagaattagtagtaccaaacaaagatttatcaata
aaacaaggtgcagtggcagcatggggttcaacaggtgttaatgatgacacttattacagt
aaaatgataaaaagtttagcagagcattttaatgtatctttgacaacaccgtttaaagat
ttaccagatgattttgtggaggaattactttatggtaaagataatataattgtagagttt
acttatgagtcaaaatttggaggaactagaaattataaatcatactttgaaggtgtaata
gtaaacttagagagaagatatagagaaactaattcagattacatgagagataagattgaa
gaatacatggcagagagaccatgtccaaagtgtaaagggatgagacttaaaaaggaagtt
ttatctgttttagttgatggaaaaaatataatggaagttacaaacttatctgtaaatgaa
ttgattgactttatggaaaatataaatcttacagaaaaacagagatttatagctcatgag
attataaaagagataaaaggaagagctatgttcttaagagatgtaggtcttgattattta
aatttatcaagaaaagctggaactttatcaggaggagaagcgcaacgtataagattagct
actcaaataggttctgcattggttggagttttatatgtacttgatgagccaagtataggg
cttcaccaaagagataatgataggcttataactactcttagacatctaacagatttagga
aataccttaatcgttgtagagcatgatgaagacacaatgagagaagctgattatgttata
gacattggtccaggtgcaggtatacatggtggtgaaatagttgcacagggtactttagat
gaaataattgaaaatgagaactcaataacgggtcaatatttaagtggtaaaaaacaaata
ttgcttcctgagactactagagaaggaaatggaagttttatagaaatagttaaagcatca
gaaaataatctgaaaaatattgatgtaaagttcccattaggtaagtttacatgcataaca
ggtgtttcaggttctggaaaaagtacattaataaacgatatactttacaaaggtgttgca
agtaaagtgaatagacttaagcaaagagctggtaagcataaggagataaaaggaattgaa
agtatagataaagttataaatatagaccaaagtcctattggaagaacacctcgttcaaat
cctgctacttatacaggtgtatttgattttataagagatatttttgcatctactaatgaa
gctaaagcaagaggttataaaaaaggtagatttagttttaatgtaaaaggtggtagatgt
gaagcttgtaagggtgatggaataataaaaatagaaatgcatttcttaccagatgtatat
gttccttgtgaaatttgtaaaggtgaaagatacaatagagaaacattgcaagtaaaatac
aaagataaaactatatctgatatattagatatgaatgtggaagaagctgttgagtttttc
gaaaatataccaaatataaaaagaaaattagaaactttaatggatgtaggactttcatat
attaaattaggacagccttcaactcaattatcaggaggagaagcacaacgtataaaatta
gctgctgaacttagtaaaagaccaacaggaaagactttgtatatattagatgaacctact
actggacttcatatggcagatgtagacaagctaatccaagtattacaaagactagcagat
acaggaaatacaattatagtcatagaacataatttagatgttataaagacttgtgattat
gtaatagacttaggaccagaaggcggagataagggtggaactatagttgcaactggaaca
ccaaaagaagtatctaaagttgatggttcttatacaggtcaattcttaaagaaatatttt
tcttaa
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