KEGG   Planococcus donghaensis: BCM40_14950
Entry
BCM40_14950       CDS       T04451                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
pdg  Planococcus donghaensis
Pathway
pdg02020  Two-component system
pdg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pdg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BCM40_14950
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BCM40_14950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdg03021]
    BCM40_14950
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pdg02035]
    BCM40_14950
Transcription machinery [BR:pdg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BCM40_14950
Bacterial motility proteins [BR:pdg02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BCM40_14950
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_5 Rv2175c_wHTH HTH_23 UPF0122 CT_C_D Sigma70_ECF HTH_28
Other DBs
NCBI-ProteinID: ANU24902
UniProt: A0A1C7ENL3
LinkDB
Position
240856..241614
AA seq 252 aa
MLNHKLSKEELVCWSDWQQHRDPDAGEYLVEQYLPLVDYVIQRFMISLPKTVEKDDVRSY
AYEGLLDALSKFNIERDLKFETYASWRIKGAIIDGLRQSDWLPRSVRDKVKKIEKAFLLL
EQQSSASVSDEEVSSYLGITKAELNKTVSEAALSTMISMDDENFEEQGKLVNYHVASPER
HLSEQIMKESLVRAIERLPEKEKITVSLCYFEEMKLTEIAEILNVSVSRVSQLHSKAMLR
LHASVLSVHDNY
NT seq 759 nt   +upstreamnt  +downstreamnt
atgctgaatcataaattatcaaaagaagagcttgtttgttggagtgactggcaacaacac
cgtgacccagatgctggtgaatacctagtggaacagtatcttcctttggtcgattacgtg
attcaacgattcatgatcagtttgcccaagactgtcgaaaaagatgacgttcgcagttat
gcttatgagggattgctcgatgctctcagcaaattcaacattgagagagatttgaaattt
gaaacttatgcttcttggcgtattaaaggagccatcattgacgggcttcgtcaaagtgac
tggctaccgaggtccgttagagacaaagtaaaaaaaattgaaaaagcctttctgttatta
gagcaacaaagcagtgcttcagtttctgatgaggaagtcagctcttatttagggattaca
aaagcagaactcaataaaacagtttctgaagcggctttatcaacaatgatatcaatggac
gacgagaattttgaagaacaaggaaagctggtaaattaccacgtggcttcaccagagcgt
catttatcagaacaaataatgaaagaatcattggtccgtgcgattgaacgcctgccagaa
aaagaaaaaattacagtgtccttgtgttattttgaagaaatgaagttaacggaaatcgcc
gaaattctaaacgttagcgtctcgagagtatctcaacttcactcaaaagcgatgctccga
ttacacgcttcagttttatctgtacatgacaattactaa

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