Planococcus donghaensis: BCM40_14950
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Entry
BCM40_14950 CDS
T04451
Name
(GenBank) RNA polymerase subunit sigma
KO
K02405
RNA polymerase sigma factor FliA
Organism
pdg
Planococcus donghaensis
Pathway
pdg02020
Two-component system
pdg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BCM40_14950
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BCM40_14950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdg03021
]
BCM40_14950
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pdg02035
]
BCM40_14950
Transcription machinery [BR:
pdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCM40_14950
Bacterial motility proteins [BR:
pdg02035
]
Flagellar system
Flagellar assembly proteins
Stator
BCM40_14950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_5
Rv2175c_wHTH
HTH_23
UPF0122
CT_C_D
Sigma70_ECF
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU24902
UniProt:
A0A1C7ENL3
LinkDB
All DBs
Position
240856..241614
Genome browser
AA seq
252 aa
AA seq
DB search
MLNHKLSKEELVCWSDWQQHRDPDAGEYLVEQYLPLVDYVIQRFMISLPKTVEKDDVRSY
AYEGLLDALSKFNIERDLKFETYASWRIKGAIIDGLRQSDWLPRSVRDKVKKIEKAFLLL
EQQSSASVSDEEVSSYLGITKAELNKTVSEAALSTMISMDDENFEEQGKLVNYHVASPER
HLSEQIMKESLVRAIERLPEKEKITVSLCYFEEMKLTEIAEILNVSVSRVSQLHSKAMLR
LHASVLSVHDNY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcataaattatcaaaagaagagcttgtttgttggagtgactggcaacaacac
cgtgacccagatgctggtgaatacctagtggaacagtatcttcctttggtcgattacgtg
attcaacgattcatgatcagtttgcccaagactgtcgaaaaagatgacgttcgcagttat
gcttatgagggattgctcgatgctctcagcaaattcaacattgagagagatttgaaattt
gaaacttatgcttcttggcgtattaaaggagccatcattgacgggcttcgtcaaagtgac
tggctaccgaggtccgttagagacaaagtaaaaaaaattgaaaaagcctttctgttatta
gagcaacaaagcagtgcttcagtttctgatgaggaagtcagctcttatttagggattaca
aaagcagaactcaataaaacagtttctgaagcggctttatcaacaatgatatcaatggac
gacgagaattttgaagaacaaggaaagctggtaaattaccacgtggcttcaccagagcgt
catttatcagaacaaataatgaaagaatcattggtccgtgcgattgaacgcctgccagaa
aaagaaaaaattacagtgtccttgtgttattttgaagaaatgaagttaacggaaatcgcc
gaaattctaaacgttagcgtctcgagagtatctcaacttcactcaaaagcgatgctccga
ttacacgcttcagttttatctgtacatgacaattactaa
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