Planococcus donghaensis: BCM40_16150
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Entry
BCM40_16150 CDS
T04451
Name
(GenBank) RNA polymerase sigma factor SigW
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pdg
Planococcus donghaensis
Brite
KEGG Orthology (KO) [BR:
pdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdg03021
]
BCM40_16150
Transcription machinery [BR:
pdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BCM40_16150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
HTH_23
HTH_Mga
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ANU24908
UniProt:
A0A1C7EM59
LinkDB
All DBs
Position
pPD76:complement(2450..3013)
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AA seq
187 aa
AA seq
DB search
MDALVNKRIAKVIKGDQNAFAEIVELYQHQLYQVCFRMLGNKQEAEDIAQEAFMRAYVNI
HTFDQNRKFSTWLYRIATNLCIDRIRKKKPDYHLDAEVRGTEGLNMYSKIANEDELPEEE
LMRMEVQERVQYEISRLPDKYRAAIVLKYIEELPLAEISEILDLPLGTVKTRIHRGREAL
RKQLSNL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgttagtgaacaaacgaatagcaaaagtaataaaaggcgatcagaacgcattc
gccgaaatcgtggagctttaccagcatcagctgtatcaagtttgctttcgtatgcttggt
aacaagcaggaagcagaagatattgcgcaagaagcttttatgcgtgcgtatgtaaatatt
catacgtttgatcagaatcggaaattttctacttggttataccgcatcgccaccaattta
tgcatcgatcgaatccgtaagaaaaagccggattatcacttggatgctgaagtgcgcggg
acggaaggcttgaatatgtattcgaaaattgccaatgaggatgaactaccagaagaagag
ttaatgcggatggaagttcaagagcgggtacagtacgaaatcagccgcttgccagataag
taccgtgccgctattgtattaaagtatattgaagaattgccacttgcggaaatcagtgaa
attttggatttgccgttaggaacggtaaagacgcgtatacaccgagggcgagaagctctt
cgtaagcaattgagcaatttgtag
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