Phyllostomus discolor (pale spear-nosed bat): 114495051
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Entry
114495051 CDS
T07739
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pdic
Phyllostomus discolor (pale spear-nosed bat)
Pathway
pdic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114495051 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdic04121
]
114495051 (SLX4)
03400 DNA repair and recombination proteins [BR:
pdic03400
]
114495051 (SLX4)
Ubiquitin system [BR:
pdic04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
114495051 (SLX4)
DNA repair and recombination proteins [BR:
pdic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114495051 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
114495051
NCBI-ProteinID:
XP_035875820
UniProt:
A0A7E6D968
LinkDB
All DBs
Position
3:112806710..112828937
Genome browser
AA seq
1758 aa
AA seq
DB search
MMDESDDDFKELCASFFQRVKKNGSKEVSGERKTRKASDSTQTTSRPQRAKPTATKSKTL
QGPRERKTRTGSRAVRTKKQGALKQQESELAPPENGEGSMPASSELRESAWSSQTEAAPN
SNSQPLPPCLTSMVPSPSKPRAAEVVLQRMQQFKRADPERLKHASDGCSFQAALEENVPE
GPAEAMMAGNGSGPWLPATESDGAVALALQQEFQQERASTHDDGLEEKGLFFCQICQKDL
SAMNVTRREQHVNWCLDEAEKALRPTAPQVPECPICGKPFLTPKSRISHVKKCAVKMEVG
PRLLLQAVRLQTAQPEGACGTLAQASSFSSHVGGLKRKGAPKKKEPQKRRKVNEPEGLSE
DLQVAMALSRSEMEQAAVPAVLTPGTAVAERKRLTTEKKGRKKKAPLSPPQLLVQDSETT
GRQIEDRVAQLFVEEEVELSSTPPLPASRLLKEELEKASRCLQPPEGKQNFLWEGSALTG
AWAPESFYTASLMPPVAPQQSTKGLMEEPTLPPVSPDHPQPGVHMPPALHSTCPRNPPPS
ASQREYQALQDLMDLAREGLSSSQLPSSGTLADSGGTTGMDLPGGLPLTGFVLPAEEQHL
ETGGQASLSLGLLVADFSAMVNNPHLSDVQFQMDSGEVLYAHKFVLYARCPLLIQYVNSE
GFFAVEDGDLRTQRVLLSDVSTEATRVFLQYLYTADTGLPPQLAPELSSLACRFGVSELA
HLCKQASVVKDSEGRQWKEKEDEACESRAENFQELLRSIWVGEEEEAEALLKSEGLEEDK
EIVNEAEMEEIYEFAATQRKLLQGERAPEIEEETNQLGEDGPRSGQILASILLNEQSENA
EQMESSRQEGDEAPGKRKNVGQSVFPPLKGQCSDGEEEAEVRKEVLDRTSSCSPSQGHLT
EKKEGSFLYSVDFNDYKQPFLSTPVGYPEPSQXXGFTREAMALSEKRAGESSHPPTCQWA
PASYPCFVQSQPPPGRSPAXPHPLPHRTRDLSLPLPQSQGRASRAASQDSPLKQKRGQSL
LMLHNHPGCEKGKEHGPMLECRHKGVLISSEKSPSIDLTQAKPGHWSSRSQNSPSNMNRE
DEVILLLDSDEEPELEQTKIKSVFNGSVEEGNVLEVSPKFSDLFSIIDVDADQEPFQSTP
RRDAPVQQEEGRLSRNQGYVGGRGTPQLFCSPKSSPDKDSTTDTSWLVPATPLAGRSRDY
SLQTQTLGLRSRMSGYEKAQLKPRAPLENRDGPRATSKFSVIVPQTPSSCPVSVNPRSPS
SPYPRSHKHFSLPAPSPTSGALTDFSGQFLKHSLPRLSLLNQATANEVVEVEDSEDEQEV
ASHQASSSPVLDSDPPIPTVDCCWHAEPLSPIPIDSLNLERTGPLSTSSPGNRAGEALDS
GDCHSPALLSTTPIRGSGIGQRKXSEKSPQASSPGSSRLSFLNSRLWDDWDGEEQKSPEV
LSLAQTPRADGGQKSEGLEKPKGANRRKNLPPKVPITPMPRYSIMETPVLKKELDRFGVR
PLPKRQMVLKLKEIFQYTHQTLESDSEDENQFSQVPVEASHSQTHATKTTKESKVAGCAR
LEAPSDPVPQRSKGPAKTKGTRHQKQQPGGSIPRMSPAKVLPPGPDDDAQLPASQESTAT
SVDSSDSSLSSQSSSSEFGVAFESIGEDEEGEKGLSASQAVDVEEAVRCYIRSTPALYRK
VLLYQPFELSELQAELKQQGIRMATGKLLDFLDANCITFTTAAARKEKFERKKQQPVGKK
RRGRPHRPAHCPLPSHGY
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgattttaaggaactctgtgccagctttttccaaagggtg
aaaaagaatggctccaaggaagtgtcaggggaaaggaagacaagaaaggcctcagacagc
actcagacaacaagcagaccgcaaagagccaaaccaactgctaccaagagtaaaaccctt
caaggccctagggagaggaagacccgaactggcagccgggctgtaaggacgaaaaaacaa
ggggcactcaagcagcaagagagtgaactagctccccccgagaatggggaaggaagtatg
cctgcttcttctgagctccgggagagtgcatggagctcccagacagaggctgctcctaac
agcaactcccagcccttacctccctgtctgacttcgatggtgccaagtccctccaaaccc
cgggcagccgaggtggtcctgcagcgaatgcagcagttcaagagagcagaccccgagcgg
ttgaaacatgcttcggatgggtgctccttccaggctgcgcttgaagaaaatgtcccagag
ggccctgcagaggcaatgatggcggggaacgggtctgggccctggctccccgccacagag
agcgatggcgcagtggccttggccctgcagcaggagtttcagcaggaacgagcctccaca
catgacgacggcctggaggagaaggggttgttcttctgccagatctgtcagaaggacctc
tcagctatgaacgtgacacggagggagcagcacgtgaactggtgcttggatgaggctgaa
aaggcactgagacctactgcacctcaggtccccgaatgcccaatttgtggcaagccattt
ctcaccccaaagagcagaatcagtcacgtgaaaaagtgtgcggtgaagatggaggttggc
ccccggctgctgctccaggccgtgcgactgcagacagctcagcccgagggggcctgcggc
acactggcacaggcatcgagctttagcagtcatgttggaggtctgaaaaggaagggagcc
cccaagaagaaggagccacagaagaggcggaaggtcaatgagcctgaggggctatcggag
gacctgcaggtggccatggctctgtcccggtccgagatggagcaggcggctgtgcctgcg
gtgctcacaccgggaactgctgttgctgagaggaaaagactgacgacagagaaaaagggt
cgcaagaagaaagcacccctttccccaccccagttgttagtccaggactcggagaccaca
ggaagacagattgaggatcgtgtggcccagctctttgtggaagaggaagtagagttgtcc
agtacaccaccgcttcctgcaagccgactcttaaaggaagagctggaaaaggccagcagg
tgtctgcaaccacctgaagggaagcagaactttctgtgggagggcagcgccctgactggg
gcctgggccccggaatccttctacacagcaagcctgatgcctcctgtggcaccccagcag
tccaccaagggtctcatggaggagcccacactgccaccagtgtcacctgaccatccacag
ccaggtgtgcacatgccacctgctctccacagcacctgtcccagaaacccaccaccctct
gccagccagagggagtaccaggccctgcaggacctcatggacctggcaagagagggattg
agcagcagccagttgcccagcagtgggaccctggctgactctgggggaaccacagggatg
gatctgcccggtggccttccactgactgggtttgtcctgccagctgaggagcagcacttg
gaaacaggcggccaggcttcgctctcccttggtttgctggttgctgacttcagtgccatg
gtcaataacccgcacctgagtgatgttcagtttcagatggacagcggggaggtgctgtat
gctcacaagtttgtgctttatgcccgatgcccacttctcattcagtatgtaaacagtgaa
ggattcttcgctgtagaagatggtgacctaagaacccagcgcgtcctgctaagtgatgtg
agcacggaggcgacccgtgtgttcctgcagtatctctacactgcggacaccggcctgccg
ccccagctggcccctgagctgagttccctggcctgcaggtttggcgtgagtgagcttgct
cacctgtgcaaacaggcatctgttgtgaaggactcggagggcagacagtggaaggagaag
gaagacgaggcttgtgaaagcagagcagagaacttccaagaactcctaaggtcaatatgg
gtaggggaagaggaggaagcagaagccttgttgaaatcggagggtcttgaagaagataaa
gaaatagttaatgaagcagaaatggaagaaatttatgaattcgcagctactcagcgaaag
ctgctccagggggaaagagctccagagatcgaggaagaaactaaccagcttggggaagat
ggtccacgttctgggcaaatcctagcaagcatcctgttgaacgaacagtcagaaaatgca
gagcagatggaatcatctaggcaggaaggagatgaggcccccggcaaaaggaaaaatgtg
ggacagtccgtgttcccgccactcaagggccagtgttcagacggggaggaggaagcagag
gtgcgaaaggaagttctggatcgtactagctcctgtagcccgtctcagggccacttgaca
gagaaaaaggaagggtcctttttgtactcagttgatttcaatgattataaacagcccttt
ttatcaactccagtaggataccctgaaccatcccaataataaggattcacaagagaggca
atggcactgtcagagaaaagggcgggggagagctcccatccccccacttgccagtgggca
cctgcatcatatccatgcttcgtccagtcacagcctcctccaggcaggagtcccgccnaa
ccacaccctctccctcatcgcacaagagacttgtccctgccactaccgcagtcacagggc
agagcttccagggcagcctcccaggactcaccgttgaagcagaagaggggccagagcctt
ctcatgctacataaccatccagggtgcgagaagggcaaagaacatggtcccatgttggaa
tgcagacataaaggagtcttgatctcatcagaaaagtctccatccattgacctaactcag
gcaaaacctggccattggagctctagatctcagaattctccatccaacatgaacagggaa
gatgaggttatccttttattggactcagatgaagagccagagctagaacaaaccaaaata
aaatcagtttttaatggttccgtggaagaggggaatgttctagaagttagccccaagttc
tctgacctgttctccatcatcgatgttgatgcagatcaggaacctttccaaagcacacca
aggagagatgccccagtacagcaagaggaggggcggctatcaaggaaccagggctatgtg
ggcggcagagggacgccccagctgttctgtagccccaagagcagccctgacaaggacagc
accacagacacctcatggctggtgcccgccaccccacttgccggcagaagccgcgactac
tcattgcagacccaaaccttgggcctcaggtccaggatgtcagggtatgaaaaggctcag
ctcaagcccagagccccattagaaaacagagatggacccagagccactagtaagttttca
gtaattgtgccccagacaccgtcatcctgcccggtctctgtcaatcctagaagcccttct
agtccctaccccaggagccacaaacacttttctctgccggctccttctccaacctcggga
gccctcactgatttcagtgggcagttcctgaagcactcgctgcctaggctgagcctgctg
aatcaggccacagcaaatgaagtggtggaggtggaagacagtgaagatgagcaggaggtg
gcttcccatcaggcgagcagcagccccgtgctggacagcgacccccccattccaactgtt
gactgctgttggcatgccgagcccctctcaccaatcccaattgacagtttgaaccttgag
cggactggccccctgagtaccagtagcccagggaatagggccggggaggccctggacagt
ggtgactgccactcccctgcactcctgagcaccacccccattcgaggaagcggcattggc
caaaggaaantctcagagaaatctcctcaggccagttcccctgggagcagcaggttgagc
ttcttgaattcacgtctgtgggatgattgggatggagaagaacagaagtctccagaggtt
ctttctctggcccagacaccgagagctgatggaggtcagaaatcagaagggttagagaag
ccaaaaggtgctaatcggaggaagaacttgcccccaaaagtacccataacgccaatgcca
cggtattccatcatggagaccccggtactaaagaaggagctggataggttcggggtgcgt
cctctgcctaaacgccagatggtcctgaaactgaaggaaatattccagtacactcaccag
acactggagtcagactccgaggatgagaaccagttctcacaggtgcctgtggaggcttct
cacagccagacccacgccaccaaaaccaccaaggaatcaaaggtggctggctgtgccaga
ctggaggccccttctgaccctgttccccaaaggtccaagggaccagctaagaccaagggc
acccgacatcaaaagcagcagcccggtggaagcatccctcgaatgtcaccagccaaagtg
ttgcctccaggccctgatgatgatgcccagctcccagcctcccaggaatccacggccacc
tctgtggacagcagtgacagttccttaagctcacagagttcttccagtgagtttggagtg
gcctttgagtctataggagaagatgaggagggtgagaaggggctcagcgcttcgcaggca
gtggacgtggaggaggcagtgaggtgctacatccgctccacaccagcgctctaccgcaag
gtcctgctgtaccagccctttgagctgtcagagctgcaggcagagctgaagcagcagggc
atccgcatggctacagggaagctactggatttcctggacgccaactgcatcaccttcacc
actgctgcggcccggaaggaaaagtttgagaggaagaagcagcagcccgtgggcaagaag
aggaggggcagaccacaccgaccagcccattgcccactcccctcccatggctattag
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integrated database retrieval system
