Paraburkholderia dioscoreae: PDMSB3_0127
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Entry
PDMSB3_0127 CDS
T08115
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00970
Aminoacyl-tRNA biosynthesis
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDMSB3_0127 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pdio03029
]
PDMSB3_0127 (gatB)
Enzymes [BR:
pdio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
PDMSB3_0127 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
PDMSB3_0127 (gatB)
Mitochondrial biogenesis [BR:
pdio03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PDMSB3_0127 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
YqeY
Motif
Other DBs
NCBI-ProteinID:
VVD26589
UniProt:
A0A5Q4Z755
LinkDB
All DBs
Position
I:120714..122189
Genome browser
AA seq
491 aa
AA seq
DB search
MTKQWEVVIGLETHAQLSTHSKIFSGASTQFGAAPNTQACPVDLALPGTLPVMNRGAVER
AIQFGLAIGATVASRSIFARKNYFYPDLPKGYQISQYEIPVVQGGQVTIQVPANEKAGSP
AYEKVVNLTRAHLEEDAGKSLHEDFAGMTGIDLNRAGTPLLEIVTEPEMRSAAEAVAYAK
TLHTLVTWLGICDGNMQEGSFRCDANVSVRPVGQAEFGTRAEIKNLNSFRFLEEAIQYEV
RRQVELIEDGGTVVQETRLYDPDKRETRSMRSKEDAHDYRYFPDPDLMPLVIDAAWVERV
KSEMPELPEAIQQRFVTQYGLTPYDANVLTSSKAMAAYYEAVVSKLGPANAKAAANWLMG
EVSSQLNREGLDIAASPVSSAQLALLLQRIADGTISNKIAKEIFLSIWEEKATDEAAADR
IIEAKGLKQISDTGALEAIIDEVLAANQKSVEEFRAGKEKAFNALIGQAMKATKGKANPA
QVNDLLKKKLS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaatgggaagtcgtgatcggtctggagacccacgcgcaactgtcgacccac
tcgaagattttttcgggcgcctcgacgcaattcggtgccgcgccgaacacgcaagcgtgt
cctgtcgatctggccttgccgggcacgttgccggtaatgaaccgcggtgccgtggagcgc
gcgatccagttcggcctcgcgattggcgcgacggtggcgtcgcgcagtattttcgcgcgc
aagaattatttctaccccgatctgccgaagggctaccagatcagccagtacgaaattccc
gtcgtgcagggcggtcaggtgacgattcaggtgccggccaatgaaaaggcgggcagtccg
gcgtacgagaaggtcgtcaacctcacgcgcgcccacctcgaagaagacgcgggcaagtcg
ctgcacgaagacttcgcgggcatgaccggcatcgacctgaatcgcgccggcacgccgctg
ctcgaaatcgtcaccgagccggaaatgcgcagtgcggcggaagcggttgcgtacgcgaag
acgctgcatacgctcgtcacgtggctcggcatctgcgacggcaacatgcaggaaggttcg
ttccgttgcgacgccaacgtatcggtgcgtccagtcggtcaggcggaattcggcacgcgc
gccgagatcaagaacctgaactcgttccgcttcctcgaagaagcgatccagtacgaagtg
cgccgtcaggtcgaactgatcgaagacggcggcacggtggtgcaggaaacgcgtctgtac
gatccggacaagcgcgaaacgcgttccatgcgcagcaaggaagacgcgcacgactaccgc
tatttccccgatcccgatctgatgccgctcgtgatcgacgcggcgtgggtcgagcgcgtc
aaaagcgaaatgccggaactgccggaagcgattcaacagcgcttcgtcacgcaatacggt
ttgacgccgtacgacgccaacgtgctgacatcgagcaaggcaatggcggcgtactacgaa
gcggtggtgagcaagctcggcccggccaacgccaaggccgcggcgaactggctgatgggc
gaagtgtcgtcgcaactgaatcgtgaaggtctcgatatcgctgcaagcccggtatcgtcc
gcgcaactcgcgctgttgctgcagcgtatcgcggacggcacgatctccaacaagatcgcc
aaggaaattttcctctcgatctgggaagagaaagccacggacgaagccgccgccgatcgc
atcatcgaagcgaagggtttgaagcagatttcggataccggcgcgctggaagcgatcatc
gacgaagtgctcgccgcgaatcagaagtcggtcgaggaattccgcgccggcaaggaaaag
gcgttcaacgcgctgatcggtcaggccatgaaggcgaccaagggcaaggccaatcccgcg
caggtcaacgacctgctcaagaagaagctgtcctga
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