Paraburkholderia dioscoreae: PDMSB3_0755
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Entry
PDMSB3_0755 CDS
T08115
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00521
Streptomycin biosynthesis
pdio00523
Polyketide sugar unit biosynthesis
pdio00541
O-Antigen nucleotide sugar biosynthesis
pdio01100
Metabolic pathways
pdio01110
Biosynthesis of secondary metabolites
pdio01250
Biosynthesis of nucleotide sugars
Module
pdio_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PDMSB3_0755 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PDMSB3_0755 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PDMSB3_0755 (rmlC)
Enzymes [BR:
pdio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PDMSB3_0755 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
VVD27217
UniProt:
A0A5Q4Z5U8
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All DBs
Position
I:775861..776412
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AA seq
183 aa
AA seq
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MAIQVTATALPEVKIIEPKVFGDARGFFFESFNAKEFAEQVEPGAEFVQDNHSRSAKGVL
RGLHYQIQNAQGKLVRVVEGEVFDVAVDIRKSSPNFGKWAGVVLSVDNHRQLWVPPGFAH
GFVVLSESAQFLYKTTDYWFPEHERSILWNDPAIGIEWPIDCEPLLAAKDAAASRLADAE
VFA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccatccaagtaaccgctaccgcactgcctgaagtcaagatcatcgagccgaaagtg
tttggagacgcgagaggctttttcttcgagagcttcaatgcgaaggagtttgccgagcag
gtcgagccgggggccgagttcgtgcaggacaaccattcgcgctccgcgaagggcgtgctg
cgcgggctgcactatcagatccagaatgcgcagggcaaactcgtgcgggtcgtcgagggt
gaagtgttcgacgtcgctgtcgacatccgcaaaagctcgccgaatttcggcaaatgggcg
ggcgtggtgctgtcggtcgacaaccatcggcaactgtgggtgccgcccggatttgcgcat
ggcttcgtggtgttgtccgagtccgcgcagttcctctacaaaaccacggactactggttt
cccgagcacgagcgcagcattctctggaacgatccggctatcggcatcgagtggcccatc
gactgcgagccgctgctggctgcgaaagacgcggcggccagccgtcttgccgatgctgaa
gtctttgcataa
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