Paraburkholderia dioscoreae: PDMSB3_1241.1
Help
Entry
PDMSB3_1241.1 CDS
T08115
Name
(GenBank) Choline dehydrogenase-like flavoprotein
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
PDMSB3_1241.1
Enzymes [BR:
pdio01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
PDMSB3_1241.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Pyr_redox_2
Abhydrolase_6
Abhydrolase_1
FAD_binding_2
FAD_oxidored
NAD_binding_8
FAD_binding_3
Thi4
Pyr_redox
HI0933_like
Hydrolase_4
GIDA
Fer4_9
Fer4_21
Fer4_6
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
VVD32532
UniProt:
A0A5Q4YXK7
LinkDB
All DBs
Position
II:complement(1277958..1281416)
Genome browser
AA seq
1152 aa
AA seq
DB search
MNRLSSAVTAIQSHYDVVVVGSGYGGAIAACRMARAGRRVCVLERGREFMAGEFPRTPFQ
GAAQVQYNTAVAHIGSPLALLEVHVNEDVNAVVGCGLGGTSLINANVALEADPRLWDDAR
WPAALRADKAARDKGYALARAMLQPSPVPEDYPALPKLQALEKSARALGMEDRFTRPDIT
VTFEDRVNAAGVEQKACVGCGDCNSGCNYDAKNSTHMNYLPDAVAHGAQIFTGTAVHSVR
RDAATRKWIVGYQLVSLGRESYGAPDLFVSADIVIVSAGTIGSTALLLRSRNQGLSVSGM
LGRHFTGNGDVLAFAYNTEPVINGVGWGSHEPGDIPPVGPTITGLIDHRNMANVRDGYVI
EEGSLAGPVGAALVGLLGAAAPLEGVDVAPRSLPEQIAYDARVSESFLRGPYHGALNHTQ
SYLVMAHDDENGQIDVDDKGQPRIVWENAGKQPIFQVVEEALKQATVPIGGKYLRNPIST
DIVGNRTVTVHPLGGCGMGEDAEHGVVDHMGRVFSGATGTAVHDGLYVMDGAVMPMSLGV
NPLLTISALAERNCELLLATHPVTADSADGAAAAPSLPPAPTPELASSSLTPSSPQKIGL
QFTETMIGTYTPVAAGEVGAIPIEFTLTVESEDLADMISNPQHLARTAGTLTCPALSSQP
MTISNGTFNLFVVDESDVDERNMNYHMTLNSTEGKTYYLSGQKIITRTSPINLWEQTNTL
YAEIRESAQADAPLLGKATLIITPENFLKQQRTLEVTHAPDLKTRLEWTLKFGKFFAGVL
FTEYGGVAAPLQYYDPKAEPRLKRALRAPAPQVVFFDTPDGTTLRLTRYLDPALKAARPV
LLIHGSGVSSRIYSTDLIATNMVEYLCASGYDVWLVDLRVSIEMPSVLVPTNVDKVARED
IPAAVARIRELTGAPEIQALGHCMGGLALSMSLLYGLEGVRSAVISQVSAHPVPGTLQKI
KAGLHIPDIMQHLGVRDLTAYTEHESWPQNLLDEALRFYPLDHDEGCGNPVCHRATFLYG
LLYEHEKLNETLHANLQELLGVHDVSVFKHLAAMVRAGKVVDAAGEDVYLAGADGMKGLE
GMRRPIGFIHGERNETYLPESTLRTYDLLTGHFPEQPYERHIIPGYGHIDCIFGKHAAVD
VYPVIAKYLDAH
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcttatcgagcgccgtgaccgcaattcaatcgcattacgacgtggtcgtggtg
ggttccggctacggcggcgcgattgccgcgtgccgcatggcgcgcgccgggcgccgcgta
tgcgtgctcgaacgcgggcgcgaattcatggccggcgaatttccccgtacgccgtttcag
ggcgccgcacaggtgcaatacaacacggcggtggcccatatcggctcgccgctggcattg
ctcgaagtgcacgtgaacgaagacgtgaacgcggtagtcggctgcggtctgggcggcacc
tcgctgatcaacgcgaacgtcgcgctcgaagccgacccgcgcctgtgggacgacgcacgc
tggccggccgcgttgcgtgccgacaaggccgcgcgcgacaaaggctatgcgcttgcccgt
gcgatgctgcaaccgtcgccggtgccggaggattatccggccttgccgaaactgcaggcg
ctcgaaaagtcggcgcgggcgctcggcatggaagaccgcttcacgcgcccggatatcacc
gtcactttcgaggaccgcgtgaacgccgcgggcgtcgagcagaaggcttgcgtcggctgc
ggcgactgcaattcgggttgcaattacgacgcgaagaattcgactcacatgaactatctg
cccgacgccgtggcccacggcgcgcagattttcaccggaaccgccgtccattcggtccgg
cgcgacgcggccacgcggaaatggatcgtgggctaccagttggtgagccttggccgcgaa
agctatggcgcgcccgatctgttcgtgagcgccgatatcgtgatcgtgtcggccggcacg
atcggctcgaccgcactgctgctgcgctcgcgcaatcaggggttgagcgtctccggcatg
ctcggcaggcatttcaccggcaatggcgacgtgctcgcctttgcgtacaacaccgagccc
gtgatcaacggcgttggctggggttcgcacgagccgggtgatatcccgccggtcgggccg
accattaccggcctcatcgatcatcgcaatatggccaacgtaagggacggctatgtgatc
gaggaaggctcgctggccggtccggtgggcgcggcgctcgtcggcctgctcggcgccgcc
gcgccgctcgaaggcgtggatgtcgcgccgcgttcgttgccggaacagatcgcttacgac
gcccgggtgtccgagagctttctgcgcggcccctatcacggcgcgctcaatcacacgcaa
agctacctcgtcatggcgcatgacgacgaaaacggccagatcgacgtggacgacaaaggc
cagccgcgcatcgtgtgggaaaacgcgggcaagcagccgatctttcaggtggtcgaggag
gcgctcaagcaggccaccgtgccgatcggcggcaaatacctgcgcaatccgatctccacc
gacattgtcggcaaccgcaccgtcaccgtgcatccgctcggcggctgcggcatgggcgag
gacgcggagcacggcgtagtcgaccacatgggccgcgtgttcagcggcgccacgggcact
gcggtgcacgacggtctgtacgtgatggacggcgccgtcatgccaatgtcgctcggcgtc
aatccgctcctcaccatttccgcgctggccgaacgcaattgcgagctgctgctggccacg
catcccgtgaccgccgactcggccgacggcgcggccgccgcgccgagcttgccgcctgcg
ccgacgccggagctcgcgtcgtcgtcgttgacgccgtcctcgccgcagaagatcggtctg
cagttcaccgaaacgatgatcggcacctacacgccggtcgcggcgggcgaggtcggcgcg
attccgatcgagttcacgctgacggtcgaatcggaagatctcgccgatatgatcagcaat
ccgcaacatctggcacgaaccgccggcacgctgacctgccccgcgctctcctcgcagcct
atgacgatctccaacggcaccttcaatctgttcgtggtcgatgagtccgacgtggacgag
cgcaacatgaattaccacatgacgctcaattcgaccgaaggcaagacgtactatctgagc
gggcaaaagatcatcacgcgcacctcgccgatcaatttgtgggagcagaccaacacgctt
tacgcggagattcgcgaatcggcgcaagccgatgcaccgctgctcggcaaggcgacgctc
atcatcacgcccgagaatttcctcaagcagcaacgcacgctcgaagtcacccatgcgccc
gatctaaagacccgcctcgagtggaccctgaaattcggcaagtttttcgcgggcgtgctg
ttcaccgaatatggcggcgtggccgcgcccttgcagtactacgacccgaaggccgagccg
cgtctgaagcgcgcgctgcgcgcgccggcgccgcaggtggtcttcttcgacacgcccgat
ggcacgacgctgaggctcacacgctacctcgatcccgcgctcaaagccgcgcgcccggtg
ctgctgattcacggctccggcgtatcgagccgcatctactccaccgacctgatcgcgacc
aacatggtcgaatatctttgcgcatcaggctacgacgtgtggctcgtcgatctgcgcgtc
agcatcgaaatgccgagcgtgctcgtgccgaccaacgtcgacaaggtcgcgcgcgaggac
attccggccgcggtcgccagaatccgcgaactgaccggtgcgccggaaattcaggcgctg
gggcactgcatgggtggcctggcgttgagcatgtcgttgctgtacggacttgaaggcgtg
cgctcggcggtcatctcgcaggtgtcggcgcaccccgtgccgggtacgttgcagaagatc
aaggccggcctgcatattcccgacatcatgcagcatctcggcgtgcgcgacctgaccgcc
tataccgaacacgagtcgtggccgcaaaacctgctcgatgaagcgctcaggttctacccg
ctcgatcacgacgagggttgcggcaatccggtctgccaccgcgcaacgttcctgtacggc
ctgctctacgaacatgaaaaactcaacgagacgcttcatgcgaacctgcaggaattgctc
ggcgtgcacgacgtttcggtattcaagcatctcgccgcgatggtgcgagccggtaaagtg
gtcgatgcagccggcgaggacgtctatctggccggagcggacggcatgaaggggctggaa
ggcatgcgccggccaatcggcttcattcacggggaaaggaacgaaacctatctgccggaa
agcacgctacgcacttacgatctgttaaccgggcatttccccgagcagccctacgagcgg
cacatcattcccggctatggacacatcgactgtatcttcggcaaacacgccgccgtggat
gtctatccggtgatcgcgaagtatctggacgcgcattga
DBGET
integrated database retrieval system
