Prevotella denticola: HMPREF9137_2283
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Entry
HMPREF9137_2283 CDS
T01459
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pdn
Prevotella denticola
Pathway
pdn00300
Lysine biosynthesis
pdn00470
D-Amino acid metabolism
pdn00550
Peptidoglycan biosynthesis
pdn01100
Metabolic pathways
pdn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pdn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF9137_2283 (alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF9137_2283 (alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF9137_2283 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF9137_2283 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdn01011
]
HMPREF9137_2283 (alr)
Enzymes [BR:
pdn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HMPREF9137_2283 (alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HMPREF9137_2283 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdn01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF9137_2283 (alr)
Racemase
HMPREF9137_2283 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF4944
Motif
Other DBs
NCBI-ProteinID:
AEA21505
LinkDB
All DBs
Position
complement(2669911..2672391)
Genome browser
AA seq
826 aa
AA seq
DB search
MNYTIEKVTTLIGARRYGDKDADISFVLTDSRSLCFPEETLFFALKSERNDGHNYIPELY
GRGVRNFVVETVPEDWNKRYPDSNFLKVVGSLEALQRLAERHRDEYLIPVVGITGSNGKT
MVKEWLYQLLSPQMVVTRSPRSYNSQIGVPLSVLLLNENTQVGVFEAGISQPGEMSALRD
IIQPTIGVFTCLGSAHQENFPSLEAKCKEKLHLFHDTQAIVYSLDDEVLNRCLDEYDYKG
EKLCWSAKDEKAVFYIKSIEKKDVETTVTYTWKNGKEAQYRLPFIDDASVENSITCAVTA
LQLGVTPAALGERMAQLEPVAMRLEVKEGQHGCTLINDSYNSDFNSLDIALDFMNRRPDH
KGRRRTLILSDILQSGDTDKDLYNKVAFLCEKRGVEKFIGIGEGLLGQRSAFRHLGKKHF
FATVNAFIHSDVFANLHDEVILLKGARQFGFDRLTELLVKKVHETVLEVNLNAVVDNLNW
YRSFLKPETKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADEGVTLRKNGITSNIM
IMNPEMSSFKTLFDYDLEPEVYCFRLLDALVKAAQKEGITGFPVHIKLDTGMHRLGFDPQ
KDMDELISRLKHQNAIIPRSVFSHFVGSDADSFDGFSARQFALFEEGSGKLQSAFKHKII
RHMDNSAGIEHFPERQMDMCRLGLGLYGINPRTNKIINNVSTLKTTILQLRHVPAGDTVG
YSRKGTIEHDSLIAAIPIGYADGLNRHLGNRHCYCLVNGKKAAYVGNICMDVAMIDVTGI
DCKEGDSVEIFGDHLPVTVLSDVLDTIPYEVLTTVSNRVKRVYFQD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgaattatactattgagaaagtaacgacgctcatcggcgcacgccgttatggcgacaag
gatgcagacatcagctttgtccttaccgacagccgctccctatgtttcccggaagaaaca
ttgttctttgccctcaagtccgagcgcaacgacgggcacaactacatcccggaactctac
ggaaggggtgtcaggaactttgttgtagaaacggtcccggaagactggaacaagcgttat
cccgactccaactttctgaaggtcgtcggctcgctggaggctctgcagcggctggcagaa
cgccaccgtgacgaatacctcattccggttgtcggcatcaccggctccaacggcaagacg
atggtcaaggagtggctctatcagttgctttctccgcagatggtcgtcacacgctcaccg
cgcagctataactcacagatcggcgtgccgctgtccgtactgctgctgaacgagaacaca
caggtaggtgtcttcgaagcgggtatcagccagccgggtgagatgtcggcactccgcgac
atcatccagcctacgatcggtgtgttcacctgcctcggttcggcccatcaggagaacttt
ccgtccctggaggcaaaatgcaaggagaaactgcacctcttccacgacacgcaggcgatt
gtctactccctggacgacgaggtgctgaaccgctgtctggacgaatacgactacaaagga
gagaagctctgctggtcggcaaaggatgaaaaggcggtcttctacatcaagtctatcgaa
aagaaggacgttgaaaccaccgtcacctacacatggaaaaacggaaaggaagcacagtac
agacttccgttcatcgatgatgccagcgtcgagaattccatcacctgtgccgtgacggca
ctccagctgggcgtcactccggctgccctcggagaacggatggcacagctggaacccgtc
gccatgcggctggaggtgaaagaaggacagcacggctgcacgcttatcaacgactcctac
aactccgacttcaactcgctggacatcgcactcgacttcatgaaccgccgtcccgaccac
aagggacgcagacgcacactgattctgagcgacatcctgcagagcggcgacaccgacaag
gacctgtataacaaggtggcattcctgtgtgagaaacgtggtgtggagaaattcatcggc
atcggcgagggactgctcggtcagcgttccgccttcaggcatctggggaaaaagcatttc
ttcgccaccgtcaatgcctttatccacagcgatgtatttgccaatctgcacgatgaagta
atcctgctgaaaggcgcacgacagttcggcttcgaccggctgacagagctgctggtgaag
aaagtacacgaaaccgtgctggaagtgaacctaaacgccgttgtcgacaacctcaactgg
taccgttctttcctgaagccggagacgaaacttgtttgcatgatcaaggccgatgcctat
ggtgcaggtgccgtggagattgccaagacgctgcaggaccaccgtgtggactaccttgcc
gtggccgtggccgacgaaggcgtgacgctccgcaagaacggcatcacgagcaacatcatg
atcatgaaccccgagatgagttcgttcaagaccctcttcgactacgacctcgagccggag
gtatattgcttccggctgctggatgcactcgtaaaggcggcgcagaaagagggcatcacc
ggcttccctgtccacatcaagctcgacacgggaatgcaccggctgggcttcgacccgcag
aaagacatggatgaactgatcagccggctgaagcaccagaacgccatcataccccgttcc
gtcttctcgcatttcgtcggttccgacgctgacagcttcgacgggttctctgcccgccag
ttcgctctcttcgaggagggcagcggaaagctgcagtcagctttcaagcataaaatcatc
cgccacatggacaactcggcaggtatcgaacatttccctgaacgacagatggacatgtgc
cggctgggactgggactctacggcatcaatccccgtacgaacaagatcatcaacaacgtc
tctaccctgaagacgaccatcctccagctgcgccatgtgcctgccggtgacactgtaggc
tattcgcgcaaggggactatcgagcatgacagcctgattgccgccataccaatcggctat
gcagacggcctgaaccgccatctcggcaaccggcactgctattgcctggtgaacggaaag
aaggcagcgtatgtcggcaacatctgcatggatgtggccatgatcgacgtcacaggcatc
gactgtaaagaaggcgacagtgtcgagattttcggtgaccacctgccggtcactgtgctc
agcgatgtacttgataccattccatacgaggtccttaccacggtcagcaaccgtgtaaaa
agagtttacttccaagactga
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