Penicillium digitatum: PDIP_57390
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Entry
PDIP_57390 CDS
T04849
Name
(RefSeq) Ribosome biogenesis protein Urb1, putative
KO
K14861
nucleolar pre-ribosomal-associated protein 1
Organism
pdp
Penicillium digitatum
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdp03009
]
PDIP_57390
Ribosome biogenesis [BR:
pdp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PDIP_57390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Npa1
NopRA1
Motif
Other DBs
NCBI-GeneID:
26234055
NCBI-ProteinID:
XP_014532965
UniProt:
K9FPD1
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MSHITEHPSRAKRRKLDDFKPEKATVTSNIKSAASLRDLLAVQQNAPLAKQGIIKFKEFL
VSIAHTERDSEKAEKLRVLKDYCDKQITNSGKEDETSVCFADIIQSWSFGDSNNNEPLLT
SVPSVLAIFLKTISSELEFREFGIALCKHLLQKDQLRLFNRGLTATKSKEHLISPCLRLL
TEIVTFDGGAVARQLYLRRYITFKRLEVFLTPNKAQEISEDESSKSTLRRNAQRYLLANL
RVQHASEKNDIIEQHKITRSFLEYIRKDPRDTVLEIIKAIERDIVQDSALSRKSKSKFFN
RHNLERLVTLYGYDRESNEPNAGGVVIANEIHRVMMNVCKTAGLGVLLPETGWYPVGADP
ETLAVDDDACIELGLDSPIYVDKYRESVPVRNGSLSFLIQCLRPDVDSLQIELLVSIFRV
APELVADYFSRKTMFISDPKVTPSWMAESAFLFSTVQLPVPTNCGWKDKQPILPPPVSIV
IENVLPRPLGQKIMTRCLNQNAEIVTLFAVRILTLAFTKLRAVLKIFQADHGQGQLFWNQ
ASAKLLAEFSRRCPAVKDVVVLFRRTEKDDLTQQEAVAELLTCYYEVMPDIALEENFDVS
LVLVDVLKRLEAPDVSADDSESLLSQLQSILQIAQQSASLRWWQKPASMQYSPFTSILKV
LMDTSDKASSRSISTLLKTILVDNSVLQSSPHAFASVLSSLENFEADALHQQLVFFDNCV
SRVAKKPVHYQDLLQSLSEDVSRTASALVAAIVEQWPFVVKSGDASTEASVGAWIASLLG
NLKQAGESTKVLKAARDALVEATKTKKIKSLLKRSLKEADDVDTEDKMDIDSGSNVPTSS
NTASAIDLDEIFGSLPTEGTTHNALNKWEREDIAEAVDQGHVAELMLCLCSQHEEIRRQA
FANIIRFMAKLKESTYAEWRTVFTLAGELLETVNNIGMEKPVPWIVGECASNCLEVLTDP
LHKVYGKVNKFLQKAPAWEVEKIPTYWVDKILLHEPELDDGYFDEIDWLLNLFIKALRTE
ADMEVYRRANVFERILSLYQSPTLGPGARRKILHIVYRAAQVGGSTTLITRSGVICWIQI
QAAEADAKESAQLAALARALYEKCDRERVDGWSNGTLGRVVDEFQAQV
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacatcacagagcatccctctcgggcgaagagaagaaagcttgatgacttcaag
ccagagaaagcaactgtcacatccaatatcaagtctgctgcttcattgcgcgacctgctc
gctgtccagcaaaacgccccgttggcaaagcaaggtataataaagtttaaagagttcctg
gtgtcaattgcacacacagaaagagatagcgagaaagcagagaaattgcgtgtcctcaag
gattattgcgacaagcaaatcaccaactccggaaaggaggatgagacctcagtgtgcttt
gcagacatcatccaatcgtggtcatttggcgatagtaataacaatgagcctttactgacc
agtgtcccttctgttcttgcgatcttccttaagacgatttcgtcggaactggagttcagg
gaattcggaatcgccctttgcaagcacctgctgcagaaagaccagctgagattgttcaac
cgcggtctgacagcaaccaagtctaaagaacacttgatctcaccatgtctccgtttgctt
acggagattgtgacttttgacggaggagcagtggcacggcagctgtaccttcggcggtac
ataacctttaagcgactggaggttttcttgacccccaacaaagcgcaggagatttcggaa
gatgagtccagcaaatcgaccctcagacgcaacgcacagcgatacctgctagcgaacctg
agagttcagcatgcctccgagaagaatgatatcatcgaacagcacaagatcaccaggtct
ttcctcgaatatatccgaaaggacccgcgggacactgtactagaaattatcaaggctatc
gagagagatatcgtgcaagattctgctctgtcccgcaaatcgaagagcaagtttttcaac
agacacaaccttgagcgactggtgacactatacggctatgatcgagagtcaaatgaacct
aatgctggaggagtcgtaattgccaatgagatccaccgagtcatgatgaacgtgtgcaaa
actgccgggcttggtgttctcttacccgagactggctggtatcccgtcggagccgatccg
gagaccttggctgttgatgatgatgcatgcattgaattgggccttgattcccccatctac
gtcgacaaataccgagagtctgtccccgtgcggaacggttccctctcattccttattcag
tgccttcggcccgatgtagatagcctccagatcgagctgctggtgtccatcttcagggtg
gcgccagagcttgttgccgattacttctcgaggaaaaccatgtttatctcagaccctaag
gttaccccctcatggatggcggaatccgcattccttttctcaactgtgcagttgcctgtc
cctacgaactgtggctggaaggacaagcagcctatcctgccaccgccggtttctatcgtc
attgaaaatgttctccctcggccccttggccagaaaattatgacccgctgtctcaaccag
aatgcggagattgtcactttgtttgccgtgcgcatcctgacccttgcgttcactaagctg
cgagctgtcctcaaaatcttccaggcggatcacggccaaggtcagctattctggaatcag
gcttctgctaaattgctggcagagttctcccgccgctgccctgctgtcaaggatgttgtt
gtcctgttccgacgaacagaaaaggatgatctgacccagcaggaggctgttgcagagctc
ttgacctgttactatgaagtgatgccggacattgctctagaggaaaactttgacgtctca
ctggtcttggtggatgtcctgaagcgactggaagccccagacgtcagcgcggacgattct
gaatcgcttttgagccaacttcagagtatcctccagatcgcacagcaatccgcttcattg
cgttggtggcaaaagccagcatccatgcaatattcgcccttcacctcgattctcaaggtt
ctcatggatacttcggataaggcctcttcgcgcagtatctccaccctgctcaagaccatt
ctggttgataactctgttctgcaaagctccccccacgcatttgcgtccgtcttgtcaagc
ctcgagaatttcgaggctgatgctttgcaccaacaactggtcttctttgataattgtgtc
tcacgtgtcgccaagaagcccgttcactaccaggatctgctacagtccttatccgaggat
gtgtccagaactgctagcgcgcttgttgctgccatcgttgagcaatggccatttgttgtc
aagagtggggatgcatccacagaagcttctgttggagcctggatcgcaagtcttctgggt
aacctgaagcaggcgggtgaaagcactaaggtcctaaaggctgctagggatgcgctggtt
gaagcaacgaagaccaagaagattaagtctctccttaaaaggtccctgaaagaggcagat
gatgtcgacactgaggacaagatggacattgactctggctccaacgtgcctacttcatcc
aatacggcctctgccattgacctcgatgagatttttggatccctgcctaccgaaggcacg
actcacaatgctctcaacaaatgggaaagagaggacattgcagaagcagtggaccagggt
cacgtcgccgagttgatgctctgtctttgttctcagcacgaagaaatccgaagacaggct
ttcgcaaacattattcgcttcatggcaaaactcaaggagtctacctacgcagaatggcgc
acagtgtttactctagccggtgagctcctcgagaccgtcaacaacatcggcatggagaag
cccgttccttggattgttggcgagtgcgcctcgaactgcctggaggttctcacagacccc
ctccacaaggtctacggcaaagtcaacaagttcctacagaaggcaccggcctgggaagta
gagaagatcccaacatactgggttgacaaaatcctcctgcacgagcctgagttggatgat
gggtacttcgatgaaatcgactggctcctgaacctgtttattaaggcactccgcaccgag
gctgacatggaggtttaccgtcgagccaatgtctttgagcgcattctttccctctaccag
tccccaaccctgggcccaggagctagacgtaagatcctgcatattgtgtaccgcgccgcc
caggtcggcggtagtactactctgatcacccgttctggtgtcatatgttggatccagatc
caagcagcagaagctgatgcgaaggaatctgctcaacttgcggcccttgcacgtgctttg
tatgagaagtgtgaccgggagcgggttgatggttggagtaatgggactcttgggcgggtc
gttgatgagttccaggcgcaggtttaa
DBGET
integrated database retrieval system
