Penicillium digitatum: PDIP_77500 Help Entry PDIP_77500        CDS       T04849                                  Name (RefSeq) DEAD/DEAH box helicase, putative   KO K18664   antiviral helicase SLH1 [EC:5.6.2.6] Organism pdp  Penicillium digitatum Brite KEGG Orthology (KO) [BR:pdp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pdp03019]     PDIP_77500 Enzymes [BR:pdp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      PDIP_77500 Messenger RNA biogenesis [BR:pdp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      PDIP_77500 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Sec63 DEAD Helicase_C ResIII AAA_22 AAA_30 Helicase_PWI AAA_19 Motif Other DBs NCBI-GeneID:  26236066 NCBI-ProteinID:  XP_014531907 UniProt:  K9FBW8 LinkDB All DBs Position Unknown AA seq 2004 aa AA seqDB search MDTIAASESQWLSQLAAMRQAIADLKLPQDFPHESISYGSDLDLDIDDYSSPGINDDVWD IISSDDEAYDDLDGFDGLDGLGLAPRSSYNRFWLEDKCQDLAMRKSTMDATELAQHIIAT LAADSNDEELQMSLAEVVGFDDLDLVIELIAHRGEVLSDKGPRLESQTDGLMAGRLQTRA EREHALQQRDFEHKSAALMPAQTRSEPSYPHVFKQQTSGNTLSANGKKYGLPLGSEQIEE PKYTEFAIPASKVGTLGKGRKLVEIAEMDGLCRGTFKGYKALNRMQSLLYDVAYKTNENM LICAPTGAGKTDAAMLTVLNAVGKNTSPNPLENPEATEFAVQVDDFKIVYVAPMKALAAE VTEKLGKRLAWLGIKVRELTGDMQLTKREIVETQIIVTTPEKWDVVTRKSTGDTELVQKV RLLIIDEVHMLHDERGAVIESLVARTQRQVESTQSLIRIVGLSATLPNYTDVADFLKVNK MAGMFFFDQSFRPVPLEQHFIGVKGKPGSKQSRDNIDSVAYEKVRDMMERGHQVMVFVHS RKDTVMTARMLMQLAAEEGREELFSCHDHENYSNALRDMKHARARELRDLFASGFGTHHA GMTRSDRNLMERMFSEGLIKVLCCTATLAWGVNLPAAAVVIKGTQLYNPQEGKFIDLSIL DVMQIFGRAGRPQFQDTGIGFICTTHDKLSHYLSAVTAQQPIESRFSSRLVDNLNAEISL GTVTSVPEAVQWLGYSYLYVRMKREPRNYGIEFAELRDDPMLVQRRRQLILQAARVLQKS QMIIFNDKTEDLKAKDVGRIASQYYVLQTSVEIFNDMMRPRAGEADVLKMISMSGEFDNI QSRDSESKELQRLREEVAQTEVAGGNDTPHAKTNLLLQAYISRAKIEDFALASDTGYVAQ NAARICRALFMIALNRRWGYQCQVLLSLCKSIEKQIWPFDHPFRQFDLPQPILRNLDEKL PTTSIESMKEMEPAEIGQLVHNHRMGNTLSKLLDNFPTLSVETEIAPLNRDVLRIRLSIY PEFTWNDRHHGASESFWVWVENSETSEIYHHEYFILSRKKLYADHELNFTIPLSDPLPSQ IYIRVISDRWLGAETVSPVSFQHLIRPDTESVYTDLLNLQPLPISALKNPVLEEVYGQRF QFFNPMQTQIFHLLYHTPANVLLGSPTGSGKTVAAELAMWWAFREKPGSKVVYIAPMKAL VRERVQDWRKRLTRQMGLKLVELTGDNTPDTRTIRDADIIITTPEKWDGISRSWQTRDYV RKVSLVIIDEIHLLGGDRGPILEIIVSRMNYIASQSKGSVRLMGMSTACANASDLANWLG VKEGLYNFRHSVRPVPLEIFIDGFPEQRGFCPLMQSMNRPTFLAIKNHSPEKPVIVFVAS RRQTRLTAKDLINYCGMEDNPRRFVRMSEDDLELNLARVKDDALREALNFGIGLHHAGLV ESDRQLAEELFANNKIQVLVATSTLAWGVNLPAHLVVVKGTQFFDAKIEGYRDMDLTDVL QMLGRAGRPQFDTSGIARIFTQDSKKAFYKHFLHTGFPVESTLHKVLDNHLGAEVSAGTI GTQQDALDYLTWTFFFRRLHKNPSYYGLEISAEEQNTMAAQATAQDFMVELVAKSLNDLA ESSCVLVDSATGEVDSTPFGKIMSYYYLSHKTIRYLVSHAKRDPTFQDVLSWMCSATEFD ELPVRHNEDLINAELAQNLPLSIDCMGDAPLWDPHTKAFLLLQAYMSRIDLPITDYVGDQ TSVLDQGIRVIQASIDVMAELGYLPACQMLMTLLQCIKSARWPEDHPLSILPGVPTEKPP SGLPGTLVSLSSQPTGAIAALVKKFNLPSNFTRITSQLPQLSVSVASVSARGISVSMTRR NQPTTPECKVHAPRFPKPQTEGFFLIVCSALPNGMDGELVGLKRVSWPPVSNGKGKGKGN SGAGSSRGVPANDYKANLLTVRSNVKFPEGILAESTSTTTARVNIRVISDSYVGMEWTVS NVEVNLDTGIETQTVEDPGIPTKD NT seq 6015 nt NT seq  +upstreamnt  +downstreamnt atggacactatagcagcctccgaatcacaatggctgtcacagctagcagctatgcgccag gccattgccgatctgaagctcccccaagactttccccacgaatcgatcagctatggaagc gatcttgatctggatattgacgactactcgtctccggggataaatgatgatgtctgggat atcatcagctcggacgatgaagcttacgacgacttggacggcttcgatgggctcgacgga cttggcctcgcaccgcggtcttcctacaaccggttctggttagaagacaagtgccaggat ttggccatgcgaaagtcaactatggatgcgactgagcttgctcaacatatcattgccact ctggctgctgacagcaacgacgaggagctacagatgtctttggccgaggttgttgggttc gatgacctggatctggttatcgaactgatagcacaccgaggagaagtactgtccgacaaa ggaccccgcttggaatcccaaacagatgggctcatggcaggtagactccaaacacgagca gagagagaacatgctcttcaacaacgcgacttcgaacacaagagtgcagcattgatgccg gcccaaacccgatcggaaccctcctacccgcatgttttcaagcaacaaacttctggaaat acactctcagcaaatggaaagaaatatggactgcctctgggtagcgagcagattgaggaa ccgaagtacactgaattcgcgatcccagcgtcaaaggtcggaacacttggaaaaggccgt aaactggtagagattgctgaaatggatggcctctgtcggggtaccttcaagggttacaaa gccctcaatcgtatgcaaagtttgctctatgatgttgcatacaaaaccaacgaaaacatg cttatttgcgcgccgactggtgcgggtaaaacggatgccgcgatgttaactgttctcaat gccgtgggaaagaacacatcccccaacccgttggaaaacccggaggcgactgaattcgct gtccaagttgacgactttaagattgtctatgttgctcccatgaaggctttggctgctgag gtgacggaaaagcttgggaaacgtttagcctggttagggatcaaggtccgcgaactgacc ggtgatatgcagttgacgaaacgagagattgtcgagacccagatcattgttacaacccct gagaaatgggatgtcgtgacgcgtaaaagcactggagatacagagcttgttcagaaggtc cgccttctcattattgatgaagtccacatgctgcacgatgagcgaggagcggtcatcgaa tccttggtcgctcgaacccaacgtcaggtcgaaagcacacaatcactgattcgcattgtt ggtttatcggccacccttccaaactacactgatgtggcggacttcctgaaagtgaacaaa atggccggcatgttctttttcgatcaatcattccgacctgtacctcttgagcaacacttc atcggtgtcaaaggaaagcctggctccaaacaatcccgtgataacattgactctgtcgcc tatgagaaagttcgtgacatgatggagagaggccaccaagtcatggttttcgtccactcg cgcaaagatactgttatgactgccaggatgcttatgcagctagctgcggaggagggtcga gaggaattgtttagctgtcatgatcatgaaaactattccaatgcccttcgtgacatgaaa catgcgcgtgcgcgtgaacttcgtgacctcttcgctagcggatttggaacccaccacgcc ggaatgactcgaagtgaccgcaatctaatggaacgaatgttctctgaaggtctcatcaag gtactttgctgtactgccaccttggcatggggtgtcaaccttcccgcagcagcagttgtt atcaaaggtactcagttgtataacccccaagagggtaaatttattgacctgagcattctc gatgtcatgcaaatatttggtcgtgcaggtcgtccgcagttccaggacaccggtatcgga tttatctgtactactcatgacaagttgagccactacctatctgctgttactgcgcagcag cccatcgagtcacgcttctctagtcgacttgtagataacttgaatgctgaaatctctctt ggaacagtcacatctgttccagaggctgtgcaatggcttggctactcctacctctatgtg cgcatgaaacgtgagccgagaaactatggaatcgagttcgccgagttacgcgatgaccca atgctggtccaaaggaggaggcagttgatcttacaagcagcacgggtgctacaaaagagt cagatgatcatcttcaacgacaagaccgaggatcttaaagccaaggatgttggtcgtatt gcgagtcaatactatgtcttgcaaaccagtgtcgagattttcaacgacatgatgcgtccc cgagctggtgaggctgatgtactcaagatgattagcatgagtggagaattcgacaatatc caatctagagacagcgagtcgaaagaactccagcgactgcgcgaggaagttgcgcagact gaagttgccggaggaaatgatacgccacacgcgaaaaccaacctcttgctgcaagcttac atctctcgcgccaagattgaggactttgctttagcctccgatactggatatgttgcccaa aatgcggcgcgtatttgccgtgctctctttatgattgcattgaatcgtcgctggggctat caatgccaagttttgttgtctctttgcaagtccattgagaaacagatttggccctttgat cacccttttcgtcagtttgacttgccccagccgatcctacgtaaccttgacgaaaagctt ccaactacttccatcgagtcgatgaaggaaatggagcctgcggagattggccagcttgtt cataaccaccgcatgggcaacacattgtccaaacttctggacaatttcccgactttgagt gttgagactgagattgcgccacttaaccgcgatgttcttcgcattcgcctttccatctac ccagagtttacctggaatgatcgccaccacggagcatctgaatccttctgggtctgggtt gagaactcggaaacctcagaaatctatcaccacgagtacttcatcctaagccggaagaag ctttacgctgatcatgaactcaacttcactattccactttctgatccgcttcccagccaa atctacattcgtgtgatctctgatcgctggctgggtgctgaaaccgtcagcccggtttct tttcagcacctcattcgcccggacactgaaagtgtgtataccgatctactcaatctccag ccacttcctatatcggctctaaagaatccagttcttgaggaagtgtatgggcaacgcttc caattcttcaaccctatgcaaacacagatattccatctcctttaccacacaccagccaac gttctcctcggttctccgactggtagtggaaagactgttgcagctgagctggcaatgtgg tgggctttccgtgagaagcccggctccaaggttgtctacattgcaccaatgaaggcattg gtccgtgagagagttcaagattggcgcaagcgtctcactaggcagatgggtttgaagctt gttgagttgaccggtgacaatacacctgacacacgtacaattcgtgatgccgatataatt attaccacacctgagaaatgggatggtatctcacgtagttggcagacccgtgactacgtc aggaaggtgagcctggtgattattgacgagatccacttgcttggtggcgatcgaggtccc attctggaaatcatcgtttcccgaatgaactatatcgcttcccagtccaaaggatcagtt cgattgatgggcatgtccactgcatgtgccaatgcttctgatctagctaactggcttggt gtcaaagaaggtctgtataatttccgtcattcagttcgcccggttccactagagattttc atcgatgggttccctgaacagcgtggcttttgccccttgatgcagtccatgaatcgccca actttcctcgcgatcaagaaccactcaccagagaagccagtcattgttttcgttgcgtct cgccgacaaactcgtctgactgctaaagatttgatcaactactgcggtatggaggataat cctcgtcgatttgtgcgaatgtctgaagatgatcttgagttgaacctggcgcgagtgaaa gatgacgccttaagagaagccctcaacttcggcattggtctgcatcatgccggtttggtt gaatctgatcgtcagctggctgaagaactctttgccaacaacaagatccaggttcttgtt gcgactagtacccttgcgtggggtgtcaaccttccggcacatcttgtggtggtcaaaggc actcagttcttcgacgctaagatcgaaggctatcgggacatggacttgacggatgttttg caaatgctcggtcgtgctggtcgcccgcagttcgacacatccggtattgcgcgcatcttc acccaggactcaaagaaggcattttacaagcatttcctccacacaggtttccccgttgag tcgaccctgcataaagttctcgacaaccatctcggcgccgaggtatctgctggaactatt ggaacgcaacaagatgcactggactacttgacctggacattcttcttccgtcgattgcat aagaacccctcatactacggtctagagatttctgcagaggaacaaaacactatggcagcc caggccacagctcaagattttatggttgaactggttgcgaagtcgctcaatgatctcgca gaatcgtcctgtgttctcgtggactcggccaccggagaggtcgactctactcccttcggc aagatcatgagttactactacctatcgcacaagacgatacggtacctcgtgtcacatgcc aagcgtgatccgactttccaagatgtcttgagctggatgtgttccgcaaccgaattcgac gagctgcctgtcagacacaatgaagacttgataaatgctgagttggcccaaaatctgccg ctgtctattgactgcatgggcgatgcgccactctgggacccacatacgaaggcgttcctt ctcctgcaggcctacatgtcccggatcgatctccccatcactgattatgttggtgatcag acatctgtgcttgatcaaggaatacgtgttatccaggcctcaatcgatgttatggctgag ctcgggtatcttcctgcgtgtcagatgctcatgactctcctccaatgcatcaagtcagcg cgctggcctgaagatcacccgttgtcgattctgccaggcgttccgaccgagaagccaccc agtggtcttccaggtacactcgtgtcgctctcgtcacagcctactggtgcaattgctgct ctagtcaagaaattcaaccttccatctaactttactcgcattacgtcccagctgcctcag ctgtcggtgtcggttgcaagtgtttctgctaggggcatttctgtgtccatgacacggcga aatcagcccacaacccctgaatgcaaggttcacgcccctagattccccaagccacaaacc gagggcttctttttgatagtttgcagtgctctgcccaatggcatggatggtgaattggtt ggcctgaagcgtgtgtcttggccaccagtatctaatggcaagggcaagggcaagggcaat tccggtgccggctccagtcgtggagtacctgccaacgattataaggccaacctgttgacg gttcgctccaacgttaagttcccagagggcatcctcgcggaatccacgagtaccaccaca gctcgggtgaacatcagagtcattagcgactcgtacgttggtatggaatggactgtctcc aatgtggaggtgaatttagatactggcatcgagacgcagactgtggaagaccccggtatt cctacgaaggactag

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