Penicillium digitatum: PDIP_82570
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Entry
PDIP_82570 CDS
T04849
Name
(RefSeq) Topoisomerase family protein TRF4, putative
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
pdp
Penicillium digitatum
Pathway
pdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PDIP_82570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdp03019
]
PDIP_82570
03016 Transfer RNA biogenesis [BR:
pdp03016
]
PDIP_82570
Enzymes [BR:
pdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PDIP_82570
Messenger RNA biogenesis [BR:
pdp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
PDIP_82570
Transfer RNA biogenesis [BR:
pdp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
PDIP_82570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
Motif
Other DBs
NCBI-GeneID:
26236573
NCBI-ProteinID:
XP_014532414
UniProt:
K9FBW0
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MPPFAPFQFRGSSNYRDSRPNPRHEFTFRYQKPATSDRPLLSSKRESMPERLESDSKPGL
KFAELSTLSDSEEAEMDMSDDSDTERPRKRRALALDGPQDTTSAPPAPKWSNPDPYTALP
PPAEITNKRVDVVKLIRKARLDVAAKIDETDAVKQNSDFISLGMAIEPEAPQSKAPDNAP
RGPKAHEVLDSAIASRKRTRDDEIKGYSRKTGKPASRFNYDGSVIDQWKPLSQETGTPWF
EGTPTSLHVGTQLHNEILSFYHWAKPQEFEHIVRADLVNRLETAFQQRYHNVSIRAFGSF
ASGLYLPTADVDLVLLSHTFLRTGVRTFGERKGQIYAFSAFLKSTNLAVPNSIECIASAR
VPILKWVDKLTGLRVDLSFDNDSGLIANETFQKWKTEYPTMPVILAVIKQFLLIRGLNEV
PTGGLGGFSITCLVTSILQHLPQGHMQPNLGTILLEFFNFYGKQLSYDKLAIRMDPPGYF
NKGYYFGNPDRLTIEDPNNRDNDISGGTKEIGLIFRAFSNAHTALKNRMEYLALVQGSNK
SILEPIIAANFDEYIEQRFQLRQVFMTEERFARYRESPPPPPPPGSPPANRASPPPPPPV
DGALPPQPAPPAPPVGKLAKKPKAKSKGTKSEPEDISSDEARGPEAKSAKARKGETRRQL
CQERAARLKRLRPDLKKLPNTLSLRQARRHGGYETDEQMNADLDTREQKLLASA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcctccattcgcccccttccagttcagaggaagttctaactatcgtgactcgcgtcct
aatccgcgccatgagttcacgttccggtaccagaaaccagctacctcggaccgaccgttg
ttgtcctcgaagagggaaagcatgcccgaacggcttgagagcgactctaagcctggactc
aagttcgccgaactttctactttgagcgacagcgaggaggcagaaatggacatgtccgat
gactccgacactgagcgaccccgtaagagacgtgcgctagctcttgatgggcctcaagac
actacttcagcccctcctgctcccaaatggtcaaaccccgatccgtacaccgcgctacct
cctccggccgagattacaaacaaaagagtggatgttgtcaagctgattcgcaaggcgaga
cttgacgttgccgcaaagatagacgagacggatgcagtcaagcaaaactcagacttcatt
tctcttggaatggcaatcgaaccagaggctcctcaaagcaaagctcctgataatgccccc
agagggccaaaggcgcatgaagttttagattcagccattgcgagtcgaaagcgaacccgt
gacgatgagatcaaaggatactcccgaaaaaccggaaagcctgccagcaggttcaactac
gatggttccgttatcgatcaatggaaaccactttctcaagagacaggcacaccttggttc
gagggcacccccacttccttacacgtgggaacccagctacataatgagattctcagcttc
taccattgggccaagccacaagaattcgaacacattgtccgcgcagatcttgtcaatcga
ttggagactgcattccagcaaagataccataacgtttcaattcgagcctttggttctttt
gcctcgggcctctatctccccacagctgatgttgatctggtgttactttctcacacattt
ttacgcacgggagttcgaacgttcggagagaggaaaggccaaatttacgcgttttcggct
tttctcaagagtacaaatcttgctgttcctaactcgatcgagtgcattgcctccgcccgt
gtgccgattctcaagtgggtagacaagctgactggattacgagtggatttgtctttcgac
aatgacagtggcttgatcgccaacgagacattccagaaatggaaaaccgagtatccgacg
atgcctgtgatcctggctgtgattaaacaattcttgttgatccgcggccttaatgaagtc
ccgactggtggactaggaggtttctccatcacttgcttggtcacaagcattctccagcat
ttgcctcagggccatatgcagccaaacctaggaaccatattgctcgagtttttcaacttc
tatgggaagcaactttcttacgataaactggcaattcggatggaccctccaggctatttt
aacaagggctattatttcggcaatcccgatcgtctcacgattgaagatcccaataatcga
gataacgacatctcaggtggcacgaaggaaattggattgatcttccgagctttttctaat
gcccatactgccctgaagaatcgcatggaatatcttgcacttgtgcaaggatcgaacaag
agcatccttgaacctatcattgcagcgaatttcgatgaatacatcgaacaacgcttccag
ctccgtcaggtgttcatgacagaagagagatttgctcgttacagggagtctccgcctccg
cctccgccgccgggatcccctcctgctaatagagcctcccctcctcctccccctcctgtc
gacggagctcttcccccccagccagcgcccccggcgccaccggtcggcaagcttgccaaa
aagcccaaggcaaaatcgaagggcacaaaatcggagccagaagatatatcctctgatgaa
gcgcgcggacccgaagctaaatctgcgaaagctcggaaaggtgagacaagacgtcagttg
tgtcaggagcgtgctgccagactcaaacgcctgaggcccgacctaaagaaactccctaat
accctcagcctccgccaagctcgccgccatggaggttacgagaccgatgagcagatgaac
gcagacctggacacgagagagcagaaactcctcgcttcggcataa
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