Penicillium digitatum: PDIP_89370
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Entry
PDIP_89370 CDS
T04849
Name
(RefSeq) DNA replication factor C subunit Rfc1, putative
KO
K10754
replication factor C subunit 1
Organism
pdp
Penicillium digitatum
Pathway
pdp03030
DNA replication
pdp03410
Base excision repair
pdp03420
Nucleotide excision repair
pdp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDIP_89370
03410 Base excision repair
PDIP_89370
03420 Nucleotide excision repair
PDIP_89370
03430 Mismatch repair
PDIP_89370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdp03032
]
PDIP_89370
03400 DNA repair and recombination proteins [BR:
pdp03400
]
PDIP_89370
DNA replication proteins [BR:
pdp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PDIP_89370
DNA repair and recombination proteins [BR:
pdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PDIP_89370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_30
AAA_16
RuvB_N
AAA_33
AAA_14
AAA_18
DTHCT
AAA_5
NACHT
AAA_28
NTPase_1
AAA_17
Motif
Other DBs
NCBI-GeneID:
26237251
NCBI-ProteinID:
XP_014530339
UniProt:
K9FSJ1
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MDIRNFFGGKPSQGSRDAAVKPTAKKEDSSATRKRRSRKVVDDSDDEEDVAPAKLPATKP
RSKSQPKPEDTKEEPTTSSDYFASNKKKPRPAKTNEQAQPDKVMIITESPKLKKTAEEPP
NKGRTSARGSTKKVTKVLEDENIGADDIFATEYGKTSKGDDAYVAGGDSDEDSDLEMLEV
KPAAAASNRTQNKQFSRDDEDDMVMEDLPKIPASKARPGRKRKSEALIDEDENGDYQEPK
KETKKVASKSKTMASPAAKKQKASPKKAKKEDKIESKELRDIFDSIPTIDAPEPPKGEPK
KFKFGAQQSRDPAMTGTKEMPVGEENCLAGLAFVFTGVLESLGREEGAQLVKKYGGKVVG
APSSKTNYVVLGSDAGPKKLEIIAKHKIKTINEDGLFELIRRLPANGGDGKAAEKYAEKL
KADEAKVRAMAAEIDAEERKREEKKRKMATAQGPKTAATTSQTPPSSQPASSGDLWTTKY
APTSTSMICGNKGAVEKVQSWLRNWHASAQADFKKGGKDGSGTYRAVIIHGPPGIGKTTA
AHLVAKLEGFDVVETNASDTRSKKLVESSTLGVLDTTSLQGYFAGQGKQVESEKKKLVLI
MDEVDGMSAGDRGGVGAVAAIVKKTKIPIILICNERKLQKMKPFDFITYDVPFRRPTAEQ
IRARLSTICFREGLKIPPPVLDGLIEGTHADIRQVINMLSTARLDQKGLNYDEGKQMSKS
WEKNIILKPWDIVGKILSAQMFSPSSTSTLNDKVELYFNDHEFSYLMLQENYLKTKPALA
GKYHGQEQRLKSLELLDNAASSISDGDLVDRMIHGTQQQWSLMPTHAIFSFVRPASFQYG
NLNERPAFTSWLGNNSKHGKLSRFVKEIQGHMRLRTSGNRDEIRQQYMPLLQEKMIRRMM
DEGKDCVDSVIDLMDEYYLTREDFDSMVELGLGPMDESKIKLETQTKATFTRLYNSRSHP
MPFIKASNVVAPKQAKKERPDIEDAIEASDEEEVVEEIKNEDEEELDLKKDKYVSLPKKK
KAPAKGKKTKKADDDVDADEEKPKKARKSRAKAKA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaatttctttggcggcaagccaagtcaaggctccagggatgccgccgtg
aagcccacggccaagaaagaggactcttccgccacgagaaagagacgcagcaggaaagtt
gtggatgacagtgatgacgaagaagatgtagctcccgccaaattgcccgctaccaaaccg
aggtctaagagtcaaccaaaacctgaggacaccaaagaggaacctacaacttcctcagac
tatttcgcttccaataagaagaagccacgacctgccaaaacgaacgagcaagctcagccc
gataaagtcatgatcattaccgaaagccctaaactaaagaagaccgctgaagagccacca
aacaagggacgaacttctgcccggggatcaacaaagaaagtcacaaaggttctcgaggat
gagaatatcggcgccgatgacatttttgcaaccgaatacggaaagaccagcaaaggagac
gacgcttatgtggctggaggtgatagcgacgaggacagtgacctcgaaatgcttgaagta
aagccagccgctgcagcatcgaataggacacagaacaagcaattttctcgcgatgacgag
gatgacatggtcatggaagatctcccaaagattcctgcctcgaaggctcgacctggccgc
aagcgcaaatcggaagctctaatcgacgaggatgaaaatggggactaccaagaacccaaa
aaggaaacaaaaaaggtagcctccaagtccaagaccatggcatcaccggctgcgaagaag
caaaaggctagccctaaaaaggccaaaaaagaggacaaaatagaaagcaaagagctccgt
gatatcttcgacagcattccaacaattgacgccccagaacctcctaagggagagccaaag
aaatttaaatttggagcacaacaaagccgggacccggcaatgactgggactaaggaaatg
cccgttggcgaagaaaactgtcttgctggtttggcttttgttttcaccggtgttctggaa
tccctcggtcgcgaagagggtgcgcaattggtgaagaagtatggaggcaaagttgtgggg
gctcccagttctaaaacgaactatgttgtcctcggatctgatgccggcccaaagaagctc
gagatcattgcgaagcacaagatcaagaccatcaacgaggacggtctctttgaattgatt
agacgactgcctgccaatggcggcgatggaaaggcagccgagaagtacgccgagaaactc
aaagccgacgaggctaaagtccgtgccatggcggccgaaattgatgcagaagagaggaaa
agagaagaaaaaaagcgaaagatggccacggctcaaggacccaagactgccgctaccacg
tctcagacgccaccaagctcacagcccgcatcatctggcgatctctggaccacgaaatat
gccccaacatcgaccagtatgatctgtggcaacaaaggtgctgtagaaaaggttcagagc
tggctgcggaactggcatgccagtgcccaggccgatttcaaaaagggtggcaaagacggc
tcggggacataccgtgccgtcattattcatggtcccccaggaatcggcaaaactacagca
gcccatcttgtggcgaagcttgaaggattcgatgtcgtggaaaccaacgccagtgatacc
agaagtaagaagcttgtcgagagctctactctaggcgtgctagacacaacatcattgcaa
ggatattttgccggacaaggcaagcaagtggagagtgaaaagaaaaagctcgtcctcatc
atggatgaggttgatggcatgtctgccggtgatcgtggaggtgtgggagctgtcgcagcc
attgtcaagaagaccaaaattccaataatccttatctgcaatgagcgaaagcttcaaaag
atgaaacctttcgatttcatcacctacgacgtgccattcagacgcccgacagctgagcaa
attcgggcaagactgtccactatttgtttccgggaaggtctcaagattccgcctcctgta
ctcgacggcctcattgaaggaacacatgccgatattcgccaggtcatcaacatgctctcc
acggcaagactagatcaaaagggtctcaattacgatgaaggcaaacagatgtcgaagtcg
tgggaaaagaatatcatcctcaagccatgggatattgtcggcaaaatcctcagcgcccag
atgttttccccaagttccacttctactctaaacgacaaggtcgagctttacttcaacgac
catgagttcagctacctcatgcttcaggagaactacctcaagaccaaacccgctcttgcg
ggcaaataccatggccaggaacaacgactgaaatcgcttgaattgctggataatgctgcc
tcgagtatcagcgacggtgaccttgtcgaccgcatgatccacgggacccagcagcagtgg
agtcttatgcccacccatgcgatcttcagctttgtgcggccagccagcttccagtatgga
aacttgaatgagcgacctgcatttactagctggctgggcaacaacagcaaacacggcaaa
ctatctcgatttgtcaaggagatacagggccacatgcgtcttcgtacctcaggtaaccgc
gacgagatccgtcagcagtacatgcccttgctccaggagaagatgatacgccgaatgatg
gacgaaggcaaggattgtgttgactcggtcattgatctcatggatgagtactatctcact
cgcgaggatttcgattccatggttgaactaggactcggcccaatggacgagtctaagatc
aaacttgagacacagaccaaagctaccttcacgcgtctgtacaattcgcgttcgcacccc
atgccattcattaaggccagcaatgttgtggcacctaagcaggcaaagaaggagaggccc
gatattgaagatgccattgaagcatctgatgaagaagaggttgtcgaagagattaagaac
gaggatgaggaagaacttgatctgaagaaggacaagtatgtgagcttgcctaagaaaaag
aaagcgccggccaagggcaagaaaacgaagaaggccgatgatgatgttgatgctgatgag
gaaaagccgaaaaaggctcgtaagagcagggccaaggccaaggcttga
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