Pseudomonas sp. ATCC 13867: H681_01235
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Entry
H681_01235 CDS
T02524
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pdr
Pseudomonas sp. ATCC 13867
Pathway
pdr00250
Alanine, aspartate and glutamate metabolism
pdr00310
Lysine degradation
pdr00350
Tyrosine metabolism
pdr00650
Butanoate metabolism
pdr00760
Nicotinate and nicotinamide metabolism
pdr01100
Metabolic pathways
pdr01120
Microbial metabolism in diverse environments
Module
pdr_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pdr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
H681_01235 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
H681_01235 (gabD)
00310 Lysine degradation
H681_01235 (gabD)
00350 Tyrosine metabolism
H681_01235 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
H681_01235 (gabD)
Enzymes [BR:
pdr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
H681_01235 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
H681_01235 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
H681_01235 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AGI22129
UniProt:
M4WQZ0
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All DBs
Position
275828..277279
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AA seq
483 aa
AA seq
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MQLNDAKLFRQQAYIDGSWVDADNGQTINVNNPATNEIIGTVPKMGADETRRAIEAADKA
LPAWRALTAKERANKLRKWFDLMIANQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFG
EEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLK
PASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDG
VYDAFVEKLKVAVAKLNIGNGLEQGITTGPLIDSKAVAKVEEHIADAVSKGAKVLAGGKP
HALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDEAEVIAMSNDTEFGLASYFYA
RDLARVFRVAEQLEYGMVGINTGLISNEVSPFGGIKASGLGREGSKYGIEDYLEIKYLCL
GGI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaatgatgccaagctgttccgtcaacaggcttacatcgacggttcctgggtc
gacgccgacaacggccagaccatcaacgtgaacaacccggccaccaacgagatcatcggc
accgtgccgaagatgggtgccgacgagacccgtcgtgccatcgaagccgccgacaaggcc
ctgccggcctggcgtgcgctgaccgctaaagagcgcgccaacaagctgcgcaaatggttc
gacctgatgatcgccaaccaggacgacctggctcgcctgatgaccatcgagcagggcaag
ccgctggccgaagccaagggcgagatcgcctacgccgcctccttcctcgagtggttcggc
gaagaagccaagcgcatttacggcgataccattccgggccaccagcccgacaagcgcatc
atcgtgatcaagcagccgatcggcgtgaccgcggccatcaccccgtggaacttcccgtcc
gcgatgatcacccgcaaagccggcccggccctggccgccggctgcaccatggtgctcaag
cccgcctcgcagacaccgtactccgctctggcgctggccgagttggccgagcgcgccggt
atcccgaagggcgtgttcagcgtcgtcaccggcagcgccggcgaagtcggcggtgagctg
accagcaacccgatcgtgcgcaagctgaccttcaccggctccaccgagatcggtcgccaa
ctgatggccgaatgtgccaaggacatcaagaaagtgtccctggaactgggaggcaacgct
ccgttcatcgtgttcgacgatgccgacctggacgccgccgtcgaaggcgcgctgatctcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgcctgtacgtacaggacggc
gtgtacgacgccttcgtcgagaagctgaaggtcgccgtggccaagctgaacatcggcaac
ggcctggagcagggcatcaccaccggcccgctgatcgattccaaggcggttgccaaggtc
gaagagcacattgccgacgccgtctccaagggcgccaaggtccttgccggcggcaagccg
cacgccctgggtggcaccttcttcgagccgaccatcctggtcgacgtaccgaagaacgcc
ctggtgtccaaggacgagaccttcggtccgctggcgccggtgttccgcttcaaggacgag
gccgaagtcatcgccatgtccaacgacaccgagttcggcctggcttcctacttctacgcc
cgtgacctggcccgcgtgttccgcgtggccgagcagctggagtacggcatggtgggcatc
aacaccggcctgatctccaacgaagtgtcgccgttcggtggtatcaaggcttcgggcctg
ggccgcgaaggttcgaagtacggtatcgaggattacctcgagatcaagtacctctgcctc
ggcggtatctga
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